Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:17:59 (2511925): wrapper (7.7.26015): starting
20:17:59 (2511925): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:17:59] Arguments: --nthreads 8
[2025-10-12 20:17:59] Threads: 8
[2025-10-12 20:17:59] Checking for CVMFS
[2025-10-12 20:18:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:18:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:18:02] 2.13.2.0 2624825 129954 295384 151641 2 512 22089561 40960000 20815 16776704 0 185524976 99.660 170080660 30838 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:18:02] CVMFS is ok
[2025-10-12 20:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:18:02] Further information can be found at the LHC@home message board.
[2025-10-12 20:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:18:02] Checking for apptainer binary...
[2025-10-12 20:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:18:02] Running /usr/bin/apptainer --version
[2025-10-12 20:18:02] apptainer version 1.4.3-1.el9
[2025-10-12 20:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:18:03] c6-8-12-1.aglt2.org
[2025-10-12 20:18:03] apptainer works
[2025-10-12 20:18:03] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:18:03] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:18:03] Starting ATLAS job with PandaID=6840536145
[2025-10-12 20:18:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:40:36]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:40:36] 2025-10-13 05:24:08,444 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 01:40:36] 2025-10-13 05:24:08,488 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2921.595464285715
[2025-10-13 01:40:36] 2025-10-13 05:24:08,516 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840536145/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,518 | INFO     | extracted standard info from prmon json
[2025-10-13 01:40:36] 2025-10-13 05:24:08,518 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:40:36] 2025-10-13 05:24:08,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:40:36] 2025-10-13 05:24:08,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:40:36] 2025-10-13 05:24:08,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:40:36] 2025-10-13 05:24:08,526 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:40:36] 2025-10-13 05:24:08,526 | INFO     | sum of square deviations: 8124592499.515153
[2025-10-13 01:40:36] 2025-10-13 05:24:08,532 | INFO     | sum of deviations: -47426081751.494934
[2025-10-13 01:40:36] 2025-10-13 05:24:08,533 | INFO     | mean x: 1760323972.6262627
[2025-10-13 01:40:36] 2025-10-13 05:24:08,533 | INFO     | mean y: 2178034.6531986534
[2025-10-13 01:40:36] 2025-10-13 05:24:08,533 | INFO     | -- intersect: 10277803383.231796
[2025-10-13 01:40:36] 2025-10-13 05:24:08,533 | INFO     | intersect: 10277803383.231796
[2025-10-13 01:40:36] 2025-10-13 05:24:08,533 | INFO     | chi2: 3.816780373382485
[2025-10-13 01:40:36] 2025-10-13 05:24:08,549 | INFO     | sum of square deviations: 7721164665.561596
[2025-10-13 01:40:36] 2025-10-13 05:24:08,551 | INFO     | sum of deviations: -29913939178.123287
[2025-10-13 01:40:36] 2025-10-13 05:24:08,551 | INFO     | mean x: 1760323820.1232877
[2025-10-13 01:40:36] 2025-10-13 05:24:08,551 | INFO     | mean y: 2184575.2534246575
[2025-10-13 01:40:36] 2025-10-13 05:24:08,551 | INFO     | -- intersect: 6822168602.253785
[2025-10-13 01:40:36] 2025-10-13 05:24:08,551 | INFO     | intersect: 6822168602.253785
[2025-10-13 01:40:36] 2025-10-13 05:24:08,551 | INFO     | chi2: 3.1734853587384775
[2025-10-13 01:40:36] 2025-10-13 05:24:08,552 | INFO     | current chi2=3.1734853587384775 (change=16.854389084848243 %)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,552 | INFO     | right removable region: 291
[2025-10-13 01:40:36] 2025-10-13 05:24:08,552 | INFO     | sum of square deviations: 7721123552.520602
[2025-10-13 01:40:36] 2025-10-13 05:24:08,576 | INFO     | sum of deviations: -105103113648.1371
[2025-10-13 01:40:36] 2025-10-13 05:24:08,576 | INFO     | mean x: 1760324125.1369863
[2025-10-13 01:40:36] 2025-10-13 05:24:08,576 | INFO     | mean y: 2199745.7534246575
[2025-10-13 01:40:36] 2025-10-13 05:24:08,576 | INFO     | -- intersect: 23964456705.29021
[2025-10-13 01:40:36] 2025-10-13 05:24:08,576 | INFO     | intersect: 23964456705.29021
[2025-10-13 01:40:36] 2025-10-13 05:24:08,577 | INFO     | chi2: 1.582922233698023
[2025-10-13 01:40:36] 2025-10-13 05:24:08,577 | INFO     | current chi2=1.582922233698023 (change=58.527290573567505 %)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,577 | INFO     | sum of square deviations: 7331236255.456448
[2025-10-13 01:40:36] 2025-10-13 05:24:08,580 | INFO     | sum of deviations: -117167223969.17766
[2025-10-13 01:40:36] 2025-10-13 05:24:08,580 | INFO     | mean x: 1760324277.6480837
[2025-10-13 01:40:36] 2025-10-13 05:24:08,580 | INFO     | mean y: 2204430.4041811847
[2025-10-13 01:40:36] 2025-10-13 05:24:08,580 | INFO     | -- intersect: 28135564441.011627
[2025-10-13 01:40:36] 2025-10-13 05:24:08,580 | INFO     | intersect: 28135564441.011627
[2025-10-13 01:40:36] 2025-10-13 05:24:08,580 | INFO     | chi2: 1.3915598621195606
[2025-10-13 01:40:36] 2025-10-13 05:24:08,581 | INFO     | current chi2=1.3915598621195606 (change=12.089183378983924 %)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,581 | INFO     | left removable region: 20
[2025-10-13 01:40:36] 2025-10-13 05:24:08,581 | INFO     | sum of square deviations: 6172260159.697384
[2025-10-13 01:40:36] 2025-10-13 05:24:08,583 | INFO     | sum of deviations: -77455929770.84123
[2025-10-13 01:40:36] 2025-10-13 05:24:08,584 | INFO     | mean x: 1760324399.6494465
[2025-10-13 01:40:36] 2025-10-13 05:24:08,584 | INFO     | mean y: 2202680.3911439115
[2025-10-13 01:40:36] 2025-10-13 05:24:08,584 | INFO     | -- intersect: 22092581171.473846
[2025-10-13 01:40:36] 2025-10-13 05:24:08,584 | INFO     | intersect: 22092581171.473846
[2025-10-13 01:40:36] 2025-10-13 05:24:08,584 | INFO     | chi2: 0.6876574608801094
[2025-10-13 01:40:36] 2025-10-13 05:24:08,584 | INFO     | -- intersect: 22092581171.473846
[2025-10-13 01:40:36] 2025-10-13 05:24:08,585 | INFO     | current memory leak: -12.55 B/s (using 271 data points, chi2=0.69)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,585 | INFO     | could have reported an average CPU frequency of 2854 MHz (13 samples)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,585 | INFO     | ..............................
[2025-10-13 01:40:36] 2025-10-13 05:24:08,585 | INFO     | . Timing measurements:
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . get job = 0 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . initial setup = 5 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . payload setup = 47 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . stage-in = 0 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . payload execution = 18097 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . stage-out = 5 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | . log creation = 0 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,586 | INFO     | ..............................
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | 
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | job summary report
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | --------------------------------------------------
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | PanDA job id: 6840536145
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | task id: 46676269
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | errors: (none)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | pilot state: finished 
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | transexitcode: 0
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | exeerrorcode: 0
[2025-10-13 01:40:36] 2025-10-13 05:24:08,672 | INFO     | exeerrordiag: 
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | exitcode: 0
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | exitmsg: OK
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | cpuconsumptiontime: 43513 s
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | nevents: 400
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | neventsw: 0
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | pid: 2536539
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | pgrp: 2536539
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | corecount: 8
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | event service: False
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | sizes: {0: 2348026, 1: 2348627, 2: 2348711, 3: 2348739, 4: 2348938, 5: 2349150, 16: 2349150, 28: 2349178, 39: 2349206, 42: 2349496, 50: 2349552, 18150: 2381934, 18
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | --------------------------------------------------
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | 
[2025-10-13 01:40:36] 2025-10-13 05:24:08,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 01:40:36] 2025-10-13 05:24:08,881 | INFO     | time since job start (18282s) is within the limit (172800.0s)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | job 6840536145 has completed (purged errors)
[2025-10-13 01:40:36] 2025-10-13 05:24:08,886 | INFO     | overall cleanup function is called
[2025-10-13 01:40:36] 2025-10-13 05:24:09,940 | INFO     | --- collectZombieJob: --- 10, [2536539]
[2025-10-13 01:40:36] 2025-10-13 05:24:09,957 | INFO     | zombie collector waiting for pid 2536539
[2025-10-13 01:40:36] 2025-10-13 05:24:09,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:40:36] 2025-10-13 05:24:09,958 | INFO     | collected zombie processes
[2025-10-13 01:40:36] 2025-10-13 05:24:09,958 | INFO     | will attempt to kill all subprocesses of pid=2536539
[2025-10-13 01:40:36] 2025-10-13 05:24:11,830 | INFO     | process IDs to be killed: [2536539] (in reverse order)
[2025-10-13 01:40:36] 2025-10-13 05:24:12,518 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:40:36] 2025-10-13 05:24:12,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:40:36] 2025-10-13 05:24:12,582 | INFO     | did not find any defunct processes belonging to 2536539
[2025-10-13 01:40:36] 2025-10-13 05:24:12,616 | INFO     | did not find any defunct processes belonging to 2536539
[2025-10-13 01:40:36] 2025-10-13 05:24:12,617 | INFO     | ready for new job
[2025-10-13 01:40:36] 2025-10-13 05:24:12,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:40:36] 2025-10-13 05:24:12,629 | INFO     | ***************************************
[2025-10-13 01:40:36] 2025-10-13 05:24:12,630 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:40:36] 2025-10-13 05:24:12,630 | INFO     | ***************************************
[2025-10-13 01:40:36] 2025-10-13 05:24:12,630 | INFO     | 
[2025-10-13 01:40:36] 2025-10-13 05:24:12,648 | INFO     | architecture information:
[2025-10-13 01:40:36] 2025-10-13 05:24:12,648 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:40:36] 2025-10-13 05:24:12,672 | INFO     | cat /etc/os-release:
[2025-10-13 01:40:36] NAME="CentOS Linux"
[2025-10-13 01:40:36] VERSION="7 (Core)"
[2025-10-13 01:40:36] ID="centos"
[2025-10-13 01:40:36] ID_LIKE="rhel fedora"
[2025-10-13 01:40:36] VERSION_ID="7"
[2025-10-13 01:40:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:40:36] ANSI_COLOR="0;31"
[2025-10-13 01:40:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:40:36] HOME_URL="https://www.centos.org/"
[2025-10-13 01:40:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:40:36] 
[2025-10-13 01:40:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:40:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:40:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:40:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:40:36] 
[2025-10-13 01:40:36] 2025-10-13 05:24:12,672 | INFO     | ***************************************
[2025-10-13 01:40:36] 2025-10-13 05:24:13,176 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 01:40:36] 2025-10-13 05:24:13,313 | INFO     | sufficient remaining disk space (55743348736 B)
[2025-10-13 01:40:36] 2025-10-13 05:24:13,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:40:36] 2025-10-13 05:24:13,313 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:40:36] 2025-10-13 05:24:13,313 | INFO     | update_server=False
[2025-10-13 01:40:36] 2025-10-13 05:24:13,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:40:36] 2025-10-13 05:24:13,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:40:36] 2025-10-13 05:24:13,321 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:40:36] 2025-10-13 05:24:13,618 | INFO     | all data control threads have been joined
[2025-10-13 01:40:36] 2025-10-13 05:24:13,730 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:40:36] 2025-10-13 05:24:13,731 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:40:36] 2025-10-13 05:24:13,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:40:36] 2025-10-13 05:24:13,750 | INFO     | will abort loop
[2025-10-13 01:40:36] 2025-10-13 05:24:13,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:40:36] 2025-10-13 05:24:14,320 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,459 | INFO     | all job control threads have been joined
[2025-10-13 01:40:36] 2025-10-13 05:24:14,625 | INFO     | [data] control thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,663 | INFO     | all payload control threads have been joined
[2025-10-13 01:40:36] 2025-10-13 05:24:14,668 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,756 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,763 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,787 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,842 | INFO     | [job] validate thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:14,995 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,001 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,328 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,402 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,465 | INFO     | [job] control thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,661 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:15,669 | INFO     | [payload] control thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:17,329 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:40:36] 2025-10-13 05:24:43,348 | INFO     | PID=2523402 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:40:36] 2025-10-13 05:24:43,348 | INFO     | .. there are 33 such processes running
[2025-10-13 01:40:36] 2025-10-13 05:24:43,349 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:40:36] 2025-10-13 05:24:43,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:40:36] 2025-10-13 05:24:43,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:40:36] 2025-10-13 05:24:58,638 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:40:36] 2025-10-13 05:24:58,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758895609664)>', '<ExcThread(monitor, started 139757807978240)>']
[2025-10-13 01:40:36] 2025-10-13 05:24:59,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:40:36] 2025-10-13 05:24:59,444 | INFO     | [monitor] control thread has ended
[2025-10-13 01:40:36] 2025-10-13 05:25:03,918 | INFO     | all workflow threads have been joined
[2025-10-13 01:40:36] 2025-10-13 05:25:03,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:40:36] 2025-10-13 05:25:03,919 | INFO     | traces error code: 0
[2025-10-13 01:40:36] 2025-10-13 05:25:03,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:40:36] 2025-10-13 05:25:05,162 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:40:36] 2025-10-13 05:25:05,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:40:36] 2025-10-13 05:25:05,193 [wrapper] pilotpid: 2523402
[2025-10-13 01:40:36] 2025-10-13 05:25:05,297 [wrapper] Pilot exit status: 0
[2025-10-13 01:40:36] 2025-10-13 05:25:05,393 [wrapper] pandaids: 6840536145
[2025-10-13 01:40:36] 2025-10-13 05:25:05,567 [wrapper] cleanup supervisor_pilot 3506455 2523403
[2025-10-13 01:40:36] 2025-10-13 05:25:05,592 [wrapper] Test setup, not cleaning
[2025-10-13 01:40:36] 2025-10-13 05:25:05,619 [wrapper] apfmon messages muted
[2025-10-13 01:40:36] 2025-10-13 05:25:05,639 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:40:36] 2025-10-13 05:25:05,653 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:40:36]  *** Error codes and diagnostics ***
[2025-10-13 01:40:36]     "exeErrorCode": 0,
[2025-10-13 01:40:36]     "exeErrorDiag": "",
[2025-10-13 01:40:36]     "pilotErrorCode": 0,
[2025-10-13 01:40:36]     "pilotErrorDiag": "",
[2025-10-13 01:40:36]  *** Listing of results directory ***
[2025-10-13 01:40:36] total 413404
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-13 01:40:36] -rwx------. 1 boincer umatlas     36292 Oct 12 14:29 runpilot2-wrapper.sh
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:29 queuedata.json
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:40:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:17 run_atlas
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:17 job.xml
[2025-10-13 01:40:36] -rw-r--r--. 2 boincer umatlas 219867203 Oct 12 20:17 EVNT.46676267._004408.pool.root.1
[2025-10-13 01:40:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:17 start_atlas.sh
[2025-10-13 01:40:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:17 shared
[2025-10-13 01:40:36] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 20:17 input.tar.gz
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:17 boinc_lockfile
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 20:18 pandaJob.out
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas    975603 Oct 12 20:19 agis_schedconf.cvmfs.json
[2025-10-13 01:40:36] drwx------. 5 boincer umatlas      4096 Oct 12 20:19 pilot3
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas 194222384 Oct 13 01:22 HITS.46676269._086200.pool.root.1
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas       530 Oct 13 01:22 boinc_task_state.xml
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas      1041 Oct 13 01:23 memory_monitor_summary.json
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas    487102 Oct 13 01:23 log.46676269._086200.job.log.tgz.1
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas      7830 Oct 13 01:24 heartbeat.json
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas        95 Oct 13 01:24 pilot_heartbeat.json
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas      5010 Oct 13 01:25 pilotlog.txt
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas   2181545 Oct 13 01:25 log.46676269._086200.job.log.1
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas       357 Oct 13 01:25 output.list
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:25 runtime_log
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas   2682880 Oct 13 01:25 result.tar.gz
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas       657 Oct 13 01:25 Sd7MDmG0FS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkgUMDmDJ6JVm.diag
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 01:25 runtime_log.err
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas      6843 Oct 13 01:40 init_data.xml
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas        28 Oct 13 01:40 wrapper_checkpoint.txt
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:40 boinc_mmap_file
[2025-10-13 01:40:36] -rw-r--r--. 1 boincer umatlas     21233 Oct 13 01:40 stderr.txt
[2025-10-13 01:40:36] HITS file was successfully produced:
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas 194222384 Oct 13 01:22 shared/HITS.pool.root.1
[2025-10-13 01:40:36]  *** Contents of shared directory: ***
[2025-10-13 01:40:36] total 407592
[2025-10-13 01:40:36] -rw-r--r--. 2 boincer umatlas 219867203 Oct 12 20:17 ATLAS.root_0
[2025-10-13 01:40:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:17 start_atlas.sh
[2025-10-13 01:40:36] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 20:17 input.tar.gz
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas 194222384 Oct 13 01:22 HITS.pool.root.1
[2025-10-13 01:40:36] -rw-------. 1 boincer umatlas   2682880 Oct 13 01:25 result.tar.gz
01:40:37 (2511925): run_atlas exited; CPU time 44088.872873
01:40:37 (2511925): called boinc_finish(0)

</stderr_txt>
]]>

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