Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:02:13 (1603090): wrapper (7.7.26015): starting
22:02:13 (1603090): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 22:02:13] Arguments: --nthreads 9
[2025-10-12 22:02:13] Threads: 9
[2025-10-12 22:02:13] Checking for CVMFS
[2025-10-12 22:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:02:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:02:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:02:15] 2.13.2.0 3836034 139015 899208 151643 2 455 30714370 40960000 51893 16776704 213 393545794 99.785 224700358 18951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 22:02:15] CVMFS is ok
[2025-10-12 22:02:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:02:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:02:16] Further information can be found at the LHC@home message board.
[2025-10-12 22:02:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:02:16] Checking for apptainer binary...
[2025-10-12 22:02:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:02:16] Running /usr/bin/apptainer --version
[2025-10-12 22:02:16] apptainer version 1.4.3-1.el9
[2025-10-12 22:02:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:02:17] lc-12-9.aglt2.org
[2025-10-12 22:02:17] apptainer works
[2025-10-12 22:02:17] Set ATHENA_PROC_NUMBER=9
[2025-10-12 22:02:17] Set ATHENA_CORE_NUMBER=9
[2025-10-12 22:02:17] Starting ATLAS job with PandaID=6840714625
[2025-10-12 22:02:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:30:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:30:26] 2025-10-13 07:29:40,584 | INFO     | monitor loop #945: job 0:6840714625 is in state 'finished'
[2025-10-13 03:30:26] 2025-10-13 07:29:40,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,113 | INFO     | time since job start (19561s) is within the limit (172800.0s)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,184 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 03:30:26] 2025-10-13 07:29:41,194 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2651.1867187499997
[2025-10-13 03:30:26] 2025-10-13 07:29:41,212 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840714625/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,213 | INFO     | extracted standard info from prmon json
[2025-10-13 03:30:26] 2025-10-13 07:29:41,213 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:30:26] 2025-10-13 07:29:41,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:30:26] 2025-10-13 07:29:41,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:30:26] 2025-10-13 07:29:41,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:30:26] 2025-10-13 07:29:41,220 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:30:26] 2025-10-13 07:29:41,221 | INFO     | sum of square deviations: 9878523266.328026
[2025-10-13 03:30:26] 2025-10-13 07:29:41,223 | INFO     | sum of deviations: 35630938608.993675
[2025-10-13 03:30:26] 2025-10-13 07:29:41,223 | INFO     | mean x: 1760330848.6246057
[2025-10-13 03:30:26] 2025-10-13 07:29:41,224 | INFO     | mean y: 2118444.949526814
[2025-10-13 03:30:26] 2025-10-13 07:29:41,224 | INFO     | -- intersect: -6347235472.41749
[2025-10-13 03:30:26] 2025-10-13 07:29:41,224 | INFO     | intersect: -6347235472.41749
[2025-10-13 03:30:26] 2025-10-13 07:29:41,224 | INFO     | chi2: 5.347764474947327
[2025-10-13 03:30:26] 2025-10-13 07:29:41,225 | INFO     | sum of square deviations: 9418519214.346233
[2025-10-13 03:30:26] 2025-10-13 07:29:41,227 | INFO     | sum of deviations: 69331573202.71156
[2025-10-13 03:30:26] 2025-10-13 07:29:41,227 | INFO     | mean x: 1760330696.1346154
[2025-10-13 03:30:26] 2025-10-13 07:29:41,228 | INFO     | mean y: 2129514.887820513
[2025-10-13 03:30:26] 2025-10-13 07:29:41,228 | INFO     | -- intersect: -12956011116.617903
[2025-10-13 03:30:26] 2025-10-13 07:29:41,228 | INFO     | intersect: -12956011116.617903
[2025-10-13 03:30:26] 2025-10-13 07:29:41,228 | INFO     | chi2: 4.024007563473921
[2025-10-13 03:30:26] 2025-10-13 07:29:41,228 | INFO     | current chi2=4.024007563473921 (change=24.753463202704804 %)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,228 | INFO     | right removable region: 311
[2025-10-13 03:30:26] 2025-10-13 07:29:41,229 | INFO     | sum of square deviations: 9418398434.346237
[2025-10-13 03:30:26] 2025-10-13 07:29:41,231 | INFO     | sum of deviations: -37907428360.13461
[2025-10-13 03:30:26] 2025-10-13 07:29:41,232 | INFO     | mean x: 1760331001.1346154
[2025-10-13 03:30:26] 2025-10-13 07:29:41,232 | INFO     | mean y: 2142767.003205128
[2025-10-13 03:30:26] 2025-10-13 07:29:41,232 | INFO     | -- intersect: 7087171265.297607
[2025-10-13 03:30:26] 2025-10-13 07:29:41,232 | INFO     | intersect: 7087171265.297607
[2025-10-13 03:30:26] 2025-10-13 07:29:41,232 | INFO     | chi2: 2.4602605446592576
[2025-10-13 03:30:26] 2025-10-13 07:29:41,232 | INFO     | current chi2=2.4602605446592576 (change=53.994598000999474 %)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,233 | INFO     | sum of square deviations: 8972823566.866434
[2025-10-13 03:30:26] 2025-10-13 07:29:41,235 | INFO     | sum of deviations: -65561122912.713356
[2025-10-13 03:30:26] 2025-10-13 07:29:41,235 | INFO     | mean x: 1760331153.6384366
[2025-10-13 03:30:26] 2025-10-13 07:29:41,236 | INFO     | mean y: 2152214.263843648
[2025-10-13 03:30:26] 2025-10-13 07:29:41,236 | INFO     | -- intersect: 12864244761.913507
[2025-10-13 03:30:26] 2025-10-13 07:29:41,236 | INFO     | intersect: 12864244761.913507
[2025-10-13 03:30:26] 2025-10-13 07:29:41,236 | INFO     | chi2: 2.0148218034785814
[2025-10-13 03:30:26] 2025-10-13 07:29:41,236 | INFO     | current chi2=2.0148218034785814 (change=18.105348319617455 %)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,236 | INFO     | left removable region: 20
[2025-10-13 03:30:26] 2025-10-13 07:29:41,237 | INFO     | sum of square deviations: 7641837354.9965515
[2025-10-13 03:30:26] 2025-10-13 07:29:41,239 | INFO     | sum of deviations: -57823543794.216515
[2025-10-13 03:30:26] 2025-10-13 07:29:41,239 | INFO     | mean x: 1760331275.6632302
[2025-10-13 03:30:26] 2025-10-13 07:29:41,239 | INFO     | mean y: 2174763.783505155
[2025-10-13 03:30:26] 2025-10-13 07:29:41,239 | INFO     | -- intersect: 13322085654.59672
[2025-10-13 03:30:26] 2025-10-13 07:29:41,239 | INFO     | intersect: 13322085654.59672
[2025-10-13 03:30:26] 2025-10-13 07:29:41,240 | INFO     | chi2: 0.21054324202151384
[2025-10-13 03:30:26] 2025-10-13 07:29:41,240 | INFO     | -- intersect: 13322085654.59672
[2025-10-13 03:30:26] 2025-10-13 07:29:41,240 | INFO     | current memory leak: -7.57 B/s (using 291 data points, chi2=0.21)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,241 | INFO     | could have reported an average CPU frequency of 2673 MHz (14 samples)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,243 | INFO     | ..............................
[2025-10-13 03:30:26] 2025-10-13 07:29:41,243 | INFO     | . Timing measurements:
[2025-10-13 03:30:26] 2025-10-13 07:29:41,243 | INFO     | . get job = 0 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,243 | INFO     | . initial setup = 9 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,244 | INFO     | . payload setup = 56 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,244 | INFO     | . stage-in = 0 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,244 | INFO     | . payload execution = 19351 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,244 | INFO     | . stage-out = 13 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,244 | INFO     | . log creation = 1 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,244 | INFO     | ..............................
[2025-10-13 03:30:26] 2025-10-13 07:29:41,527 | INFO     | 
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | job summary report
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | --------------------------------------------------
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | PanDA job id: 6840714625
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | task id: 46676269
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | errors: (none)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | pilot state: finished 
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | transexitcode: 0
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | exeerrorcode: 0
[2025-10-13 03:30:26] 2025-10-13 07:29:41,528 | INFO     | exeerrordiag: 
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | exitcode: 0
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | exitmsg: OK
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | cpuconsumptiontime: 44871 s
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | nevents: 400
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | neventsw: 0
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | pid: 1630099
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | pgrp: 1630099
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | corecount: 9
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | event service: False
[2025-10-13 03:30:26] 2025-10-13 07:29:41,529 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 4: 2348941, 5: 2348969, 15: 2349153, 26: 2349181, 38: 2349209, 40: 2349499, 50: 2349527, 19412: 2382186, 19
[2025-10-13 03:30:26] 2025-10-13 07:29:41,530 | INFO     | --------------------------------------------------
[2025-10-13 03:30:26] 2025-10-13 07:29:41,530 | INFO     | 
[2025-10-13 03:30:26] 2025-10-13 07:29:41,530 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:30:26] 2025-10-13 07:29:41,596 | INFO     | job 6840714625 has completed (purged errors)
[2025-10-13 03:30:26] 2025-10-13 07:29:41,597 | INFO     | overall cleanup function is called
[2025-10-13 03:30:26] 2025-10-13 07:29:42,623 | INFO     | --- collectZombieJob: --- 10, [1630099]
[2025-10-13 03:30:26] 2025-10-13 07:29:42,623 | INFO     | zombie collector waiting for pid 1630099
[2025-10-13 03:30:26] 2025-10-13 07:29:42,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:30:26] 2025-10-13 07:29:42,624 | INFO     | collected zombie processes
[2025-10-13 03:30:26] 2025-10-13 07:29:42,624 | INFO     | will attempt to kill all subprocesses of pid=1630099
[2025-10-13 03:30:26] 2025-10-13 07:29:46,204 | INFO     | process IDs to be killed: [1630099] (in reverse order)
[2025-10-13 03:30:26] 2025-10-13 07:29:46,679 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:30:26] 2025-10-13 07:29:46,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:30:26] 2025-10-13 07:29:46,728 | INFO     | did not find any defunct processes belonging to 1630099
[2025-10-13 03:30:26] 2025-10-13 07:29:46,782 | INFO     | did not find any defunct processes belonging to 1630099
[2025-10-13 03:30:26] 2025-10-13 07:29:46,782 | INFO     | ready for new job
[2025-10-13 03:30:26] 2025-10-13 07:29:46,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:30:26] 2025-10-13 07:29:46,784 | INFO     | ***************************************
[2025-10-13 03:30:26] 2025-10-13 07:29:46,784 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:30:26] 2025-10-13 07:29:46,784 | INFO     | ***************************************
[2025-10-13 03:30:26] 2025-10-13 07:29:46,784 | INFO     | 
[2025-10-13 03:30:26] 2025-10-13 07:29:46,807 | INFO     | architecture information:
[2025-10-13 03:30:26] 2025-10-13 07:29:46,808 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:30:26] 2025-10-13 07:29:46,859 | INFO     | cat /etc/os-release:
[2025-10-13 03:30:26] NAME="CentOS Linux"
[2025-10-13 03:30:26] VERSION="7 (Core)"
[2025-10-13 03:30:26] ID="centos"
[2025-10-13 03:30:26] ID_LIKE="rhel fedora"
[2025-10-13 03:30:26] VERSION_ID="7"
[2025-10-13 03:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:30:26] ANSI_COLOR="0;31"
[2025-10-13 03:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:30:26] HOME_URL="https://www.centos.org/"
[2025-10-13 03:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:30:26] 
[2025-10-13 03:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:30:26] 
[2025-10-13 03:30:26] 2025-10-13 07:29:46,860 | INFO     | ***************************************
[2025-10-13 03:30:26] 2025-10-13 07:29:47,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 03:30:26] 2025-10-13 07:29:47,490 | INFO     | sufficient remaining disk space (416153600000 B)
[2025-10-13 03:30:26] 2025-10-13 07:29:47,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:30:26] 2025-10-13 07:29:47,490 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:30:26] 2025-10-13 07:29:47,490 | INFO     | update_server=False
[2025-10-13 03:30:26] 2025-10-13 07:29:47,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:30:26] 2025-10-13 07:29:47,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:30:26] 2025-10-13 07:29:47,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:30:26] 2025-10-13 07:29:47,491 | INFO     | aborting loop
[2025-10-13 03:30:26] 2025-10-13 07:29:47,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:30:26] 2025-10-13 07:29:48,067 | INFO     | all data control threads have been joined
[2025-10-13 03:30:26] 2025-10-13 07:29:48,495 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:48,496 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:48,496 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:48,629 | INFO     | all job control threads have been joined
[2025-10-13 03:30:26] 2025-10-13 07:29:48,736 | INFO     | all payload control threads have been joined
[2025-10-13 03:30:26] 2025-10-13 07:29:49,073 | INFO     | [data] control thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,230 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,253 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,254 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,254 | INFO     | [job] validate thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,254 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:30:26] 2025-10-13 07:29:49,637 | INFO     | [job] control thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,742 | INFO     | [payload] control thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,798 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,802 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:49,844 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:29:53,376 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:30:26] 2025-10-13 07:30:16,077 | INFO     | PID=1608279 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:30:26] 2025-10-13 07:30:16,078 | INFO     | .. there are 68 such processes running
[2025-10-13 03:30:26] 2025-10-13 07:30:16,078 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:30:26] 2025-10-13 07:30:16,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:30:26] 2025-10-13 07:30:16,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:30:26] 2025-10-13 07:30:16,636 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:30:26] 2025-10-13 07:30:18,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940749113152)>', '<ExcThread(monitor, started 139940402804480)>']
[2025-10-13 03:30:26] 2025-10-13 07:30:19,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:30:26] 2025-10-13 07:30:19,112 | INFO     | [monitor] control thread has ended
[2025-10-13 03:30:26] 2025-10-13 07:30:23,526 | INFO     | all workflow threads have been joined
[2025-10-13 03:30:26] 2025-10-13 07:30:23,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:30:26] 2025-10-13 07:30:23,527 | INFO     | traces error code: 0
[2025-10-13 03:30:26] 2025-10-13 07:30:23,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:30:26] 2025-10-13 07:30:25,105 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:30:26] 2025-10-13 07:30:25,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:30:26] 2025-10-13 07:30:25,154 [wrapper] pilotpid: 1608279
[2025-10-13 03:30:26] 2025-10-13 07:30:25,158 [wrapper] Pilot exit status: 0
[2025-10-13 03:30:26] 2025-10-13 07:30:25,261 [wrapper] pandaids: 6840714625
[2025-10-13 03:30:26] 2025-10-13 07:30:25,385 [wrapper] cleanup supervisor_pilot 2819511 1608280
[2025-10-13 03:30:26] 2025-10-13 07:30:25,444 [wrapper] Test setup, not cleaning
[2025-10-13 03:30:26] 2025-10-13 07:30:25,489 [wrapper] apfmon messages muted
[2025-10-13 03:30:26] 2025-10-13 07:30:25,529 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:30:26] 2025-10-13 07:30:25,543 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:30:26]  *** Error codes and diagnostics ***
[2025-10-13 03:30:26]     "exeErrorCode": 0,
[2025-10-13 03:30:26]     "exeErrorDiag": "",
[2025-10-13 03:30:26]     "pilotErrorCode": 0,
[2025-10-13 03:30:26]     "pilotErrorDiag": "",
[2025-10-13 03:30:26]  *** Listing of results directory ***
[2025-10-13 03:30:26] total 414288
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-13 03:30:26] -rwx------. 1 boincer umatlas     36292 Oct 12 15:57 runpilot2-wrapper.sh
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:57 queuedata.json
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:30:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:02 run_atlas
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:02 job.xml
[2025-10-13 03:30:26] -rw-r--r--. 2 boincer umatlas 220080545 Oct 12 22:02 EVNT.46676267._004475.pool.root.1
[2025-10-13 03:30:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:02 start_atlas.sh
[2025-10-13 03:30:26] drwxrwx--x. 2 boincer umatlas        68 Oct 12 22:02 shared
[2025-10-13 03:30:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 22:02 input.tar.gz
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:02 boinc_lockfile
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 22:02 pandaJob.out
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas    975595 Oct 12 22:03 agis_schedconf.cvmfs.json
[2025-10-13 03:30:26] drwx------. 5 boincer umatlas      4096 Oct 12 22:03 pilot3
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas      6795 Oct 13 03:18 init_data.xml
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas 195029010 Oct 13 03:26 HITS.46676269._088021.pool.root.1
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas       531 Oct 13 03:26 boinc_task_state.xml
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas      1044 Oct 13 03:28 memory_monitor_summary.json
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas    515070 Oct 13 03:28 log.46676269._088021.job.log.tgz.1
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas        95 Oct 13 03:29 pilot_heartbeat.json
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas      7832 Oct 13 03:29 heartbeat.json
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas      4825 Oct 13 03:30 pilotlog.txt
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:30 wrapper_checkpoint.txt
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:30 boinc_mmap_file
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas   2095399 Oct 13 03:30 log.46676269._088021.job.log.1
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas       357 Oct 13 03:30 output.list
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:30 runtime_log
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas   2631680 Oct 13 03:30 result.tar.gz
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas       655 Oct 13 03:30 w4UKDmwMHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6sUMDmDrmYem.diag
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 03:30 runtime_log.err
[2025-10-13 03:30:26] -rw-r--r--. 1 boincer umatlas     21256 Oct 13 03:30 stderr.txt
[2025-10-13 03:30:26] HITS file was successfully produced:
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas 195029010 Oct 13 03:26 shared/HITS.pool.root.1
[2025-10-13 03:30:26]  *** Contents of shared directory: ***
[2025-10-13 03:30:26] total 408536
[2025-10-13 03:30:26] -rw-r--r--. 2 boincer umatlas 220080545 Oct 12 22:02 ATLAS.root_0
[2025-10-13 03:30:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:02 start_atlas.sh
[2025-10-13 03:30:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 22:02 input.tar.gz
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas 195029010 Oct 13 03:26 HITS.pool.root.1
[2025-10-13 03:30:26] -rw-------. 1 boincer umatlas   2631680 Oct 13 03:30 result.tar.gz
03:30:28 (1603090): run_atlas exited; CPU time 45880.997328
03:30:28 (1603090): called boinc_finish(0)

</stderr_txt>
]]>

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