Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:38:04 (1382804): wrapper (7.7.26015): starting
11:38:04 (1382804): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 11:38:04] Arguments: --nthreads 4
[2025-10-13 11:38:04] Threads: 4
[2025-10-13 11:38:04] Checking for CVMFS
[2025-10-13 11:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:38:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:38:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:38:04] 2.9.2.0 3100 3955 96936 151656 3 57 31189222 36864001 0 130560 0 3601112 99.992 137677 725 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:38:04] CVMFS is ok
[2025-10-13 11:38:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:38:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:38:04] Further information can be found at the LHC@home message board.
[2025-10-13 11:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:38:04] Checking for apptainer binary...
[2025-10-13 11:38:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:38:04] Running /usr/bin/apptainer --version
[2025-10-13 11:38:04] apptainer version 1.4.1-1.1
[2025-10-13 11:38:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:38:04] thA338
[2025-10-13 11:38:04] apptainer works
[2025-10-13 11:38:05] Set ATHENA_PROC_NUMBER=4
[2025-10-13 11:38:05] Set ATHENA_CORE_NUMBER=4
[2025-10-13 11:38:05] Starting ATLAS job with PandaID=6840428584
[2025-10-13 11:38:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:53:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:53:23] 2025-10-13 10:52:28,545 | INFO     | [job] control thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:28,719 | INFO     | [data] control thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:28,726 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:28,943 | INFO     | [job] validate thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,015 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,098 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,110 | INFO     | [payload] control thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,137 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,280 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,422 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:29,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:53:23] 2025-10-13 10:52:33,522 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:53:23] 2025-10-13 10:52:56,892 | INFO     | PID=1386594 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:53:23] 2025-10-13 10:52:56,892 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:53:23] 2025-10-13 10:52:56,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:53:23] 2025-10-13 10:52:56,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:53:23] 2025-10-13 10:53:10,866 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-13 12:53:23] 2025-10-13 10:53:17,466 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:53:23] 2025-10-13 10:53:18,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526190565184)>', '<ExcThread(monitor, started 140525908756224)>']
[2025-10-13 12:53:23] 2025-10-13 10:53:19,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:53:23] 2025-10-13 10:53:19,005 | INFO     | [monitor] control thread has ended
[2025-10-13 12:53:23] 2025-10-13 10:53:23,505 | INFO     | all workflow threads have been joined
[2025-10-13 12:53:23] 2025-10-13 10:53:23,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:53:23] 2025-10-13 10:53:23,505 | INFO     | traces error code: 0
[2025-10-13 12:53:23] 2025-10-13 10:53:23,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:53:23] 2025-10-13 10:53:23,584 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:53:23] 2025-10-13 10:53:23,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:53:23] 2025-10-13 10:53:23,592 [wrapper] pilotpid: 1386594
[2025-10-13 12:53:23] 2025-10-13 10:53:23,596 [wrapper] Pilot exit status: 0
[2025-10-13 12:53:23] 2025-10-13 10:53:23,607 [wrapper] pandaids: 6840428584
[2025-10-13 12:53:23] 2025-10-13 10:53:23,628 [wrapper] cleanup supervisor_pilot 1408657 1386595
[2025-10-13 12:53:23] 2025-10-13 10:53:23,631 [wrapper] Test setup, not cleaning
[2025-10-13 12:53:23] 2025-10-13 10:53:23,635 [wrapper] apfmon messages muted
[2025-10-13 12:53:23] 2025-10-13 10:53:23,638 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:53:23] 2025-10-13 10:53:23,642 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:53:23]  *** Error codes and diagnostics ***
[2025-10-13 12:53:23]     "exeErrorCode": 0,
[2025-10-13 12:53:23]     "exeErrorDiag": "",
[2025-10-13 12:53:23]     "pilotErrorCode": 0,
[2025-10-13 12:53:23]     "pilotErrorDiag": "",
[2025-10-13 12:53:23]  *** Listing of results directory ***
[2025-10-13 12:53:23] total 418768
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:57 queuedata.json
[2025-10-13 12:53:23] -rwx------ 1 boinc boinc     36292 Oct 12 18:58 runpilot2-wrapper.sh
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:53:23] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:38 run_atlas
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:38 job.xml
[2025-10-13 12:53:23] -rw-r--r-- 2 boinc boinc 222122452 Oct 13 11:38 EVNT.46676267._004792.pool.root.1
[2025-10-13 12:53:23] -rw-r--r-- 2 boinc boinc    569680 Oct 13 11:38 input.tar.gz
[2025-10-13 12:53:23] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:38 start_atlas.sh
[2025-10-13 12:53:23] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:38 shared
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:38 boinc_setup_complete
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc      6375 Oct 13 11:38 init_data.xml
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:38 boinc_lockfile
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc      2550 Oct 13 11:38 pandaJob.out
[2025-10-13 12:53:23] -rw------- 1 boinc boinc    972849 Oct 13 11:38 agis_schedconf.cvmfs.json
[2025-10-13 12:53:23] -rw------- 1 boinc boinc   1560580 Oct 13 11:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:53:23] drwx------ 5 boinc boinc      4096 Oct 13 11:38 pilot3
[2025-10-13 12:53:23] -rw------- 1 boinc boinc 200965868 Oct 13 12:51 HITS.46676269._084186.pool.root.1
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:52 boinc_task_state.xml
[2025-10-13 12:53:23] -rw------- 1 boinc boinc      1019 Oct 13 12:52 memory_monitor_summary.json
[2025-10-13 12:53:23] -rw------- 1 boinc boinc    258455 Oct 13 12:52 log.46676269._084186.job.log.tgz.1
[2025-10-13 12:53:23] -rw------- 1 boinc boinc      7760 Oct 13 12:52 heartbeat.json
[2025-10-13 12:53:23] -rw------- 1 boinc boinc        95 Oct 13 12:52 pilot_heartbeat.json
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:53 wrapper_checkpoint.txt
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:53 boinc_mmap_file
[2025-10-13 12:53:23] -rw------- 1 boinc boinc      4938 Oct 13 12:53 pilotlog.txt
[2025-10-13 12:53:23] -rw------- 1 boinc boinc    659916 Oct 13 12:53 log.46676269._084186.job.log.1
[2025-10-13 12:53:23] -rw------- 1 boinc boinc       357 Oct 13 12:53 output.list
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:53 runtime_log
[2025-10-13 12:53:23] -rw------- 1 boinc boinc    942080 Oct 13 12:53 result.tar.gz
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc      8777 Oct 13 12:53 runtime_log.err
[2025-10-13 12:53:23] -rw------- 1 boinc boinc       658 Oct 13 12:53 hvHKDmDaES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFUUMDm0AUKCn.diag
[2025-10-13 12:53:23] -rw-r--r-- 1 boinc boinc      6032 Oct 13 12:53 stderr.txt
[2025-10-13 12:53:23] HITS file was successfully produced:
[2025-10-13 12:53:23] -rw------- 1 boinc boinc 200965868 Oct 13 12:51 shared/HITS.pool.root.1
[2025-10-13 12:53:23]  *** Contents of shared directory: ***
[2025-10-13 12:53:23] total 414680
[2025-10-13 12:53:23] -rw-r--r-- 2 boinc boinc 222122452 Oct 13 11:38 ATLAS.root_0
[2025-10-13 12:53:23] -rw-r--r-- 2 boinc boinc    569680 Oct 13 11:38 input.tar.gz
[2025-10-13 12:53:23] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:38 start_atlas.sh
[2025-10-13 12:53:23] -rw------- 1 boinc boinc 200965868 Oct 13 12:51 HITS.pool.root.1
[2025-10-13 12:53:23] -rw------- 1 boinc boinc    942080 Oct 13 12:53 result.tar.gz
12:53:25 (1382804): run_atlas exited; CPU time 16793.399616
12:53:25 (1382804): called boinc_finish(0)

</stderr_txt>
]]>

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