Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:52:26 (29698): wrapper (7.7.26015): starting
19:52:26 (29698): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:52:26] Arguments: --nthreads 8
[2025-10-12 19:52:26] Threads: 8
[2025-10-12 19:52:26] Checking for CVMFS
[2025-10-12 19:52:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:52:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:52:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:52:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:52:26] 2.11.2.0 8814 53546 113920 151641 1 57 18267142 18432000 1833 130560 0 48652136 99.974 2407484 39880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:52:26] CVMFS is ok
[2025-10-12 19:52:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:52:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:52:26] Further information can be found at the LHC@home message board.
[2025-10-12 19:52:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:52:26] Checking for apptainer binary...
[2025-10-12 19:52:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:52:26] Running /usr/bin/apptainer --version
[2025-10-12 19:52:27] apptainer version 1.3.2-1.el7
[2025-10-12 19:52:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:52:27] c-206-19.aglt2.org
[2025-10-12 19:52:27] apptainer works
[2025-10-12 19:52:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:52:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:52:27] Starting ATLAS job with PandaID=6840714682
[2025-10-12 19:52:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:50:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:50:20] 2025-10-13 02:49:48,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,564 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:50:20] 2025-10-13 02:49:48,571 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2444.6666666666665
[2025-10-12 22:50:20] 2025-10-13 02:49:48,575 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840714682/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,576 | INFO     | extracted standard info from prmon json
[2025-10-12 22:50:20] 2025-10-13 02:49:48,576 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:50:20] 2025-10-13 02:49:48,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:50:20] 2025-10-13 02:49:48,577 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:50:20] 2025-10-13 02:49:48,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:50:20] 2025-10-13 02:49:48,580 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:50:20] 2025-10-13 02:49:48,580 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 22:50:20] 2025-10-13 02:49:48,581 | INFO     | sum of deviations: 13149035132.999989
[2025-10-12 22:50:20] 2025-10-13 02:49:48,581 | INFO     | mean x: 1760318460.5
[2025-10-12 22:50:20] 2025-10-13 02:49:48,581 | INFO     | mean y: 2480542.5517241377
[2025-10-12 22:50:20] 2025-10-13 02:49:48,581 | INFO     | -- intersect: -14167632183.257473
[2025-10-12 22:50:20] 2025-10-13 02:49:48,581 | INFO     | intersect: -14167632183.257473
[2025-10-12 22:50:20] 2025-10-13 02:49:48,582 | INFO     | chi2: 1.4803740170929587
[2025-10-12 22:50:20] 2025-10-13 02:49:48,582 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | sum of deviations: 12432083283.999998
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | mean x: 1760318308.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | mean y: 2479744.349112426
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | -- intersect: -14619688781.342411
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | intersect: -14619688781.342411
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | chi2: 1.481171185062696
[2025-10-12 22:50:20] 2025-10-13 02:49:48,583 | INFO     | current chi2=1.481171185062696 (change=-0.053849092224869256 %)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,584 | INFO     | right removable region: 168
[2025-10-12 22:50:20] 2025-10-13 02:49:48,584 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | sum of deviations: -11213484698.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | mean x: 1760318613.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | mean y: 2507318.1893491126
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | -- intersect: 13191406368.984234
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | intersect: 13191406368.984234
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | chi2: 0.12932209286084342
[2025-10-12 22:50:20] 2025-10-13 02:49:48,585 | INFO     | current chi2=0.12932209286084342 (change=91.26422840662957 %)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,586 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,586 | INFO     | sum of deviations: -13688312861.5
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | mean x: 1760318765.5
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | mean y: 2510244.5426829266
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | -- intersect: 17620137654.832043
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | intersect: 17620137654.832043
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | chi2: 0.11282075386527231
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | current chi2=0.11282075386527231 (change=12.759876236558684 %)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,587 | INFO     | left removable region: 20
[2025-10-12 22:50:20] 2025-10-13 02:49:48,588 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,588 | INFO     | sum of deviations: -3113880542.000001
[2025-10-12 22:50:20] 2025-10-13 02:49:48,588 | INFO     | mean x: 1760318887.5
[2025-10-12 22:50:20] 2025-10-13 02:49:48,588 | INFO     | mean y: 2495716.2837837837
[2025-10-12 22:50:20] 2025-10-13 02:49:48,589 | INFO     | -- intersect: 5455672209.608061
[2025-10-12 22:50:20] 2025-10-13 02:49:48,589 | INFO     | intersect: 5455672209.608061
[2025-10-12 22:50:20] 2025-10-13 02:49:48,589 | INFO     | chi2: 0.05567573525445339
[2025-10-12 22:50:20] 2025-10-13 02:49:48,589 | INFO     | -- intersect: 5455672209.608061
[2025-10-12 22:50:20] 2025-10-13 02:49:48,589 | INFO     | current memory leak: -3.10 B/s (using 148 data points, chi2=0.06)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,589 | INFO     | could have reported an average CPU frequency of 2559 MHz (9 samples)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | ..............................
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . Timing measurements:
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . get job = 0 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . initial setup = 2 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . payload setup = 4 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . stage-in = 0 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . payload execution = 10600 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . stage-out = 0 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,590 | INFO     | . log creation = 0 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,591 | INFO     | ..............................
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | 
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | job summary report
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | --------------------------------------------------
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | PanDA job id: 6840714682
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | task id: 46676269
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | errors: (none)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:50:20] 2025-10-13 02:49:48,667 | INFO     | pilot state: finished 
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | transexitcode: 0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | exeerrorcode: 0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | exeerrordiag: 
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | exitcode: 0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | exitmsg: OK
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | cpuconsumptiontime: 79215 s
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | nevents: 400
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | neventsw: 0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | pid: 7542
[2025-10-12 22:50:20] 2025-10-13 02:49:48,668 | INFO     | pgrp: 7542
[2025-10-12 22:50:20] 2025-10-13 02:49:48,669 | INFO     | corecount: 8
[2025-10-12 22:50:20] 2025-10-13 02:49:48,669 | INFO     | event service: False
[2025-10-12 22:50:20] 2025-10-13 02:49:48,669 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 5: 2349175, 12: 2349231, 10608: 2378072, 10610: 2387314, 10614: 2387516}
[2025-10-12 22:50:20] 2025-10-13 02:49:48,669 | INFO     | --------------------------------------------------
[2025-10-12 22:50:20] 2025-10-13 02:49:48,669 | INFO     | 
[2025-10-12 22:50:20] 2025-10-13 02:49:48,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:50:20] 2025-10-13 02:49:48,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,689 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,690 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:50:20] 2025-10-13 02:49:48,690 | INFO     | job 6840714682 has completed (purged errors)
[2025-10-12 22:50:20] 2025-10-13 02:49:48,691 | INFO     | overall cleanup function is called
[2025-10-12 22:50:20] 2025-10-13 02:49:49,699 | INFO     | --- collectZombieJob: --- 10, [7542]
[2025-10-12 22:50:20] 2025-10-13 02:49:49,699 | INFO     | zombie collector waiting for pid 7542
[2025-10-12 22:50:20] 2025-10-13 02:49:49,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:50:20] 2025-10-13 02:49:49,700 | INFO     | collected zombie processes
[2025-10-12 22:50:20] 2025-10-13 02:49:49,700 | INFO     | will attempt to kill all subprocesses of pid=7542
[2025-10-12 22:50:20] 2025-10-13 02:49:49,848 | INFO     | process IDs to be killed: [7542] (in reverse order)
[2025-10-12 22:50:20] 2025-10-13 02:49:49,902 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:50:20] 2025-10-13 02:49:49,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:50:20] 2025-10-13 02:49:49,905 | INFO     | did not find any defunct processes belonging to 7542
[2025-10-12 22:50:20] 2025-10-13 02:49:49,907 | INFO     | did not find any defunct processes belonging to 7542
[2025-10-12 22:50:20] 2025-10-13 02:49:49,908 | INFO     | ready for new job
[2025-10-12 22:50:20] 2025-10-13 02:49:49,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:50:20] 2025-10-13 02:49:49,909 | INFO     | ***************************************
[2025-10-12 22:50:20] 2025-10-13 02:49:49,909 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:50:20] 2025-10-13 02:49:49,909 | INFO     | ***************************************
[2025-10-12 22:50:20] 2025-10-13 02:49:49,909 | INFO     | 
[2025-10-12 22:50:20] 2025-10-13 02:49:49,910 | INFO     | architecture information:
[2025-10-12 22:50:20] 2025-10-13 02:49:49,910 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:50:20] 2025-10-13 02:49:49,920 | INFO     | cat /etc/os-release:
[2025-10-12 22:50:20] NAME="CentOS Linux"
[2025-10-12 22:50:20] VERSION="7 (Core)"
[2025-10-12 22:50:20] ID="centos"
[2025-10-12 22:50:20] ID_LIKE="rhel fedora"
[2025-10-12 22:50:20] VERSION_ID="7"
[2025-10-12 22:50:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:50:20] ANSI_COLOR="0;31"
[2025-10-12 22:50:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:50:20] HOME_URL="https://www.centos.org/"
[2025-10-12 22:50:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:50:20] 
[2025-10-12 22:50:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:50:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:50:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:50:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:50:20] 
[2025-10-12 22:50:20] 2025-10-13 02:49:49,921 | INFO     | ***************************************
[2025-10-12 22:50:20] 2025-10-13 02:49:50,424 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:50:20] 2025-10-13 02:49:50,463 | INFO     | sufficient remaining disk space (28018999296 B)
[2025-10-12 22:50:20] 2025-10-13 02:49:50,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:50:20] 2025-10-13 02:49:50,464 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:50:20] 2025-10-13 02:49:50,464 | INFO     | update_server=False
[2025-10-12 22:50:20] 2025-10-13 02:49:50,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:50:20] 2025-10-13 02:49:50,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:50:20] 2025-10-13 02:49:50,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:50:20] 2025-10-13 02:49:50,675 | INFO     | all data control threads have been joined
[2025-10-12 22:50:20] 2025-10-13 02:49:50,722 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:50:20] 2025-10-13 02:49:50,722 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:50:20] 2025-10-13 02:49:50,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:50:20] 2025-10-13 02:49:50,722 | INFO     | will abort loop
[2025-10-12 22:50:20] 2025-10-13 02:49:50,885 | INFO     | all job control threads have been joined
[2025-10-12 22:50:20] 2025-10-13 02:49:51,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:50:20] 2025-10-13 02:49:51,380 | INFO     | all payload control threads have been joined
[2025-10-12 22:50:20] 2025-10-13 02:49:51,470 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,470 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,642 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,664 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,690 | INFO     | [data] control thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,727 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,891 | INFO     | [job] control thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,931 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:51,984 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:52,046 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:52,385 | INFO     | [payload] control thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:52,471 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:52,731 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:52,732 | INFO     | [job] validate thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:55,091 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:50:20] 2025-10-13 02:49:55,641 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:50:20] 2025-10-13 02:49:55,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253771888448)>', '<ExcThread(monitor, started 140252953962240)>']
[2025-10-12 22:50:20] 2025-10-13 02:50:00,827 | INFO     | all workflow threads have been joined
[2025-10-12 22:50:20] 2025-10-13 02:50:00,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:50:20] 2025-10-13 02:50:00,845 | INFO     | traces error code: 0
[2025-10-12 22:50:20] 2025-10-13 02:50:00,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:50:20] 2025-10-13 02:50:20,049 | INFO     | PID=994 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 22:50:20] 2025-10-13 02:50:20,049 | INFO     | .. there are 3 such processes running
[2025-10-12 22:50:20] 2025-10-13 02:50:20,050 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:50:20] 2025-10-13 02:50:20,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:50:20] 2025-10-13 02:50:20,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:50:20] 2025-10-13 02:50:20,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:50:20] 2025-10-13 02:50:20,051 | INFO     | [monitor] control thread has ended
[2025-10-12 22:50:20] 2025-10-13 02:50:20,179 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:50:20] 2025-10-13 02:50:20,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:50:20] 2025-10-13 02:50:20,184 [wrapper] pilotpid: 994
[2025-10-12 22:50:20] 2025-10-13 02:50:20,189 [wrapper] Pilot exit status: 0
[2025-10-12 22:50:20] 2025-10-13 02:50:20,199 [wrapper] pandaids: 6840714682
[2025-10-12 22:50:20] 2025-10-13 02:50:20,232 [wrapper] cleanup supervisor_pilot  6478 995
[2025-10-12 22:50:20] 2025-10-13 02:50:20,234 [wrapper] Test setup, not cleaning
[2025-10-12 22:50:20] 2025-10-13 02:50:20,236 [wrapper] apfmon messages muted
[2025-10-12 22:50:20] 2025-10-13 02:50:20,238 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:50:20] 2025-10-13 02:50:20,240 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:50:20]  *** Error codes and diagnostics ***
[2025-10-12 22:50:20]     "exeErrorCode": 0,
[2025-10-12 22:50:20]     "exeErrorDiag": "",
[2025-10-12 22:50:20]     "pilotErrorCode": 0,
[2025-10-12 22:50:20]     "pilotErrorDiag": "",
[2025-10-12 22:50:20]  *** Listing of results directory ***
[2025-10-12 22:50:20] total 411756
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:55 queuedata.json
[2025-10-12 22:50:20] -rwx------ 1 boincer umatlas     36292 Oct 12 15:56 runpilot2-wrapper.sh
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:50:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:52 run_atlas
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:52 job.xml
[2025-10-12 22:50:20] -rw-r--r-- 2 boincer umatlas 222627439 Oct 12 19:52 EVNT.46676267._004477.pool.root.1
[2025-10-12 22:50:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:52 start_atlas.sh
[2025-10-12 22:50:20] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:52 shared
[2025-10-12 22:50:20] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 19:52 input.tar.gz
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:52 boinc_lockfile
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:52 pandaJob.out
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas    975603 Oct 12 19:52 agis_schedconf.cvmfs.json
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas   1560580 Oct 12 19:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:50:20] drwx------ 5 boincer umatlas      4096 Oct 12 19:52 pilot3
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 22:48 init_data.xml
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas 191274915 Oct 12 22:49 HITS.46676269._088078.pool.root.1
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas       530 Oct 12 22:49 boinc_task_state.xml
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas      1054 Oct 12 22:49 memory_monitor_summary.json
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas    427182 Oct 12 22:49 log.46676269._088078.job.log.tgz.1
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas      7857 Oct 12 22:49 heartbeat.json
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:50 boinc_mmap_file
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas        28 Oct 12 22:50 wrapper_checkpoint.txt
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas        95 Oct 12 22:50 pilot_heartbeat.json
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas       818 Oct 12 22:50 pilotlog.txt
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas   1491429 Oct 12 22:50 log.46676269._088078.job.log.1
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas       357 Oct 12 22:50 output.list
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:50 runtime_log
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas   1935360 Oct 12 22:50 result.tar.gz
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 22:50 runtime_log.err
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas       662 Oct 12 22:50 PsnLDmuLHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdsUMDmIpxcSo.diag
[2025-10-12 22:50:20] -rw-r--r-- 1 boincer umatlas     21096 Oct 12 22:50 stderr.txt
[2025-10-12 22:50:20] HITS file was successfully produced:
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas 191274915 Oct 12 22:49 shared/HITS.pool.root.1
[2025-10-12 22:50:20]  *** Contents of shared directory: ***
[2025-10-12 22:50:20] total 406676
[2025-10-12 22:50:20] -rw-r--r-- 2 boincer umatlas 222627439 Oct 12 19:52 ATLAS.root_0
[2025-10-12 22:50:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:52 start_atlas.sh
[2025-10-12 22:50:20] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 19:52 input.tar.gz
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas 191274915 Oct 12 22:49 HITS.pool.root.1
[2025-10-12 22:50:20] -rw------- 1 boincer umatlas   1935360 Oct 12 22:50 result.tar.gz
22:50:22 (29698): run_atlas exited; CPU time 79342.477239
22:50:22 (29698): called boinc_finish(0)

</stderr_txt>
]]>

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