Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:52:31 (3761148): wrapper (7.7.26015): starting
10:52:31 (3761148): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 10:52:31] Arguments: --nthreads 3
[2025-10-13 10:52:31] Threads: 3
[2025-10-13 10:52:31] Checking for CVMFS
[2025-10-13 10:52:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:52:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:52:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:52:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:52:32] 2.9.2.0 796922 5568 83752 151654 1 57 32841464 36864000 0 130560 0 4431319 99.991 192176 961 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:52:32] CVMFS is ok
[2025-10-13 10:52:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:52:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:52:32] Further information can be found at the LHC@home message board.
[2025-10-13 10:52:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:52:32] Checking for apptainer binary...
[2025-10-13 10:52:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:52:32] Running /usr/bin/apptainer --version
[2025-10-13 10:52:32] apptainer version 1.4.1-1.1
[2025-10-13 10:52:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:52:32] atlasA303
[2025-10-13 10:52:32] apptainer works
[2025-10-13 10:52:32] Set ATHENA_PROC_NUMBER=3
[2025-10-13 10:52:32] Set ATHENA_CORE_NUMBER=3
[2025-10-13 10:52:32] Starting ATLAS job with PandaID=6840715211
[2025-10-13 10:52:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:20:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:20:51] 2025-10-13 10:19:51,049 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 12:20:51] 2025-10-13 10:19:51,049 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:20:51] 2025-10-13 10:19:51,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:20:51] 2025-10-13 10:19:51,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:20:51] 2025-10-13 10:19:51,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:20:51] 2025-10-13 10:19:51,322 | INFO     | all job control threads have been joined
[2025-10-13 12:20:51] 2025-10-13 10:19:51,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:20:51] 2025-10-13 10:19:51,960 | INFO     | aborting loop
[2025-10-13 12:20:51] 2025-10-13 10:19:52,021 | INFO     | all data control threads have been joined
[2025-10-13 12:20:51] 2025-10-13 10:19:52,054 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:52,055 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:52,157 | INFO     | all payload control threads have been joined
[2025-10-13 12:20:51] 2025-10-13 10:19:52,281 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:52,328 | INFO     | [job] control thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:52,773 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:52,966 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,027 | INFO     | [data] control thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,054 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,055 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,107 | INFO     | [job] validate thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,163 | INFO     | [payload] control thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,170 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,187 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:53,257 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:19:54,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:20:51] 2025-10-13 10:19:58,404 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:20:01,341 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:20:51] 2025-10-13 10:20:02,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:20:51] 2025-10-13 10:20:44,915 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:20:51] 2025-10-13 10:20:46,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005269952320)>', '<ExcThread(monitor, started 140004625987328)>']
[2025-10-13 12:20:51] 2025-10-13 10:20:47,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:20:51] 2025-10-13 10:20:47,347 | INFO     | [monitor] control thread has ended
[2025-10-13 12:20:51] 2025-10-13 10:20:51,738 | INFO     | all workflow threads have been joined
[2025-10-13 12:20:51] 2025-10-13 10:20:51,738 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:20:51] 2025-10-13 10:20:51,738 | INFO     | traces error code: 0
[2025-10-13 12:20:51] 2025-10-13 10:20:51,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:20:51] 2025-10-13 10:20:51,791 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:20:51] 2025-10-13 10:20:51,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:20:51] 2025-10-13 10:20:51,796 [wrapper] pilotpid: 3764884
[2025-10-13 12:20:51] 2025-10-13 10:20:51,798 [wrapper] Pilot exit status: 0
[2025-10-13 12:20:51] 2025-10-13 10:20:51,805 [wrapper] pandaids: 6840715211
[2025-10-13 12:20:51] 2025-10-13 10:20:51,824 [wrapper] cleanup supervisor_pilot 3800352 3764885
[2025-10-13 12:20:51] 2025-10-13 10:20:51,826 [wrapper] Test setup, not cleaning
[2025-10-13 12:20:51] 2025-10-13 10:20:51,829 [wrapper] apfmon messages muted
[2025-10-13 12:20:51] 2025-10-13 10:20:51,831 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:20:51] 2025-10-13 10:20:51,834 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:20:51]  *** Error codes and diagnostics ***
[2025-10-13 12:20:51]     "exeErrorCode": 0,
[2025-10-13 12:20:51]     "exeErrorDiag": "",
[2025-10-13 12:20:51]     "pilotErrorCode": 0,
[2025-10-13 12:20:51]     "pilotErrorDiag": "",
[2025-10-13 12:20:51]  *** Listing of results directory ***
[2025-10-13 12:20:51] total 414760
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:50 pilot3.tar.gz
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:01 queuedata.json
[2025-10-13 12:20:51] -rwx------ 1 boinc boinc     36292 Oct 12 22:02 runpilot2-wrapper.sh
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:20:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:52 run_atlas
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:52 job.xml
[2025-10-13 12:20:51] -rw-r--r-- 2 boinc boinc 220477771 Oct 13 10:52 EVNT.46676267._004481.pool.root.1
[2025-10-13 12:20:51] -rw-r--r-- 2 boinc boinc    569681 Oct 13 10:52 input.tar.gz
[2025-10-13 12:20:51] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:52 start_atlas.sh
[2025-10-13 12:20:51] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:52 shared
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:52 boinc_setup_complete
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc      6450 Oct 13 10:52 init_data.xml
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:52 boinc_lockfile
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:52 pandaJob.out
[2025-10-13 12:20:51] -rw------- 1 boinc boinc    972857 Oct 13 10:52 agis_schedconf.cvmfs.json
[2025-10-13 12:20:51] -rw------- 1 boinc boinc   1560580 Oct 13 10:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:20:51] drwx------ 5 boinc boinc      4096 Oct 13 10:52 pilot3
[2025-10-13 12:20:51] -rw------- 1 boinc boinc        95 Oct 13 12:19 pilot_heartbeat.json
[2025-10-13 12:20:51] -rw------- 1 boinc boinc 198317447 Oct 13 12:19 HITS.46676269._088163.pool.root.1
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:19 boinc_task_state.xml
[2025-10-13 12:20:51] -rw------- 1 boinc boinc      1017 Oct 13 12:19 memory_monitor_summary.json
[2025-10-13 12:20:51] -rw------- 1 boinc boinc    251963 Oct 13 12:19 log.46676269._088163.job.log.tgz.1
[2025-10-13 12:20:51] -rw------- 1 boinc boinc      7761 Oct 13 12:19 heartbeat.json
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:20 boinc_mmap_file
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:20 wrapper_checkpoint.txt
[2025-10-13 12:20:51] -rw------- 1 boinc boinc      4628 Oct 13 12:20 pilotlog.txt
[2025-10-13 12:20:51] -rw------- 1 boinc boinc    764896 Oct 13 12:20 log.46676269._088163.job.log.1
[2025-10-13 12:20:51] -rw------- 1 boinc boinc       357 Oct 13 12:20 output.list
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:20 runtime_log
[2025-10-13 12:20:51] -rw------- 1 boinc boinc   1034240 Oct 13 12:20 result.tar.gz
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc      8792 Oct 13 12:20 runtime_log.err
[2025-10-13 12:20:51] -rw------- 1 boinc boinc       661 Oct 13 12:20 71SKDm0RHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCNlNDmPmX6Zn.diag
[2025-10-13 12:20:51] -rw-r--r-- 1 boinc boinc      7083 Oct 13 12:20 stderr.txt
[2025-10-13 12:20:51] HITS file was successfully produced:
[2025-10-13 12:20:51] -rw------- 1 boinc boinc 198317447 Oct 13 12:19 shared/HITS.pool.root.1
[2025-10-13 12:20:51]  *** Contents of shared directory: ***
[2025-10-13 12:20:51] total 410580
[2025-10-13 12:20:51] -rw-r--r-- 2 boinc boinc 220477771 Oct 13 10:52 ATLAS.root_0
[2025-10-13 12:20:51] -rw-r--r-- 2 boinc boinc    569681 Oct 13 10:52 input.tar.gz
[2025-10-13 12:20:51] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:52 start_atlas.sh
[2025-10-13 12:20:51] -rw------- 1 boinc boinc 198317447 Oct 13 12:19 HITS.pool.root.1
[2025-10-13 12:20:51] -rw------- 1 boinc boinc   1034240 Oct 13 12:20 result.tar.gz
12:20:53 (3761148): run_atlas exited; CPU time 15047.788723
12:20:53 (3761148): called boinc_finish(0)

</stderr_txt>
]]>

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