Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:51:44 (634725): wrapper (7.7.26015): starting
20:51:44 (634725): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:51:44] Arguments: --nthreads 8
[2025-10-12 20:51:44] Threads: 8
[2025-10-12 20:51:44] Checking for CVMFS
[2025-10-12 20:51:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:51:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:51:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:51:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:51:46] 2.13.2.0 5065 113620 408408 151642 2 65 37650503 40960001 14512 16776704 2 191526072 99.752 121639436 37758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:51:46] CVMFS is ok
[2025-10-12 20:51:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:51:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:51:46] Further information can be found at the LHC@home message board.
[2025-10-12 20:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:51:46] Checking for apptainer binary...
[2025-10-12 20:51:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:51:46] Running /usr/bin/apptainer --version
[2025-10-12 20:51:46] apptainer version 1.4.3-1.el9
[2025-10-12 20:51:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:51:46] c-206-35.aglt2.org
[2025-10-12 20:51:46] apptainer works
[2025-10-12 20:51:46] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:51:46] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:51:46] Starting ATLAS job with PandaID=6840223739
[2025-10-12 20:51:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:59:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:59:26] 2025-10-13 07:58:31,403 | INFO     | sum of deviations: -26588997559.26795
[2025-10-13 03:59:26] 2025-10-13 07:58:31,403 | INFO     | mean x: 1760329552.7511961
[2025-10-13 03:59:26] 2025-10-13 07:58:31,403 | INFO     | mean y: 2510859.5358851673
[2025-10-13 03:59:26] 2025-10-13 07:58:31,403 | INFO     | -- intersect: 2068973994.294858
[2025-10-13 03:59:26] 2025-10-13 07:58:31,403 | INFO     | intersect: 2068973994.294858
[2025-10-13 03:59:26] 2025-10-13 07:58:31,404 | INFO     | chi2: 2.4820312000397573
[2025-10-13 03:59:26] 2025-10-13 07:58:31,404 | INFO     | sum of square deviations: 21847137110.232475
[2025-10-13 03:59:26] 2025-10-13 07:58:31,407 | INFO     | sum of deviations: -322874104.67797655
[2025-10-13 03:59:26] 2025-10-13 07:58:31,407 | INFO     | mean x: 1760329400.2639225
[2025-10-13 03:59:26] 2025-10-13 07:58:31,407 | INFO     | mean y: 2515799.813559322
[2025-10-13 03:59:26] 2025-10-13 07:58:31,408 | INFO     | -- intersect: 28531326.524486136
[2025-10-13 03:59:26] 2025-10-13 07:58:31,408 | INFO     | intersect: 28531326.524486136
[2025-10-13 03:59:26] 2025-10-13 07:58:31,408 | INFO     | chi2: 1.7978262214379253
[2025-10-13 03:59:26] 2025-10-13 07:58:31,408 | INFO     | current chi2=1.7978262214379253 (change=27.566332711324193 %)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,408 | INFO     | sum of square deviations: 21063429053.80153
[2025-10-13 03:59:26] 2025-10-13 07:58:31,412 | INFO     | sum of deviations: -794345789.3896998
[2025-10-13 03:59:26] 2025-10-13 07:58:31,412 | INFO     | mean x: 1760329247.7720587
[2025-10-13 03:59:26] 2025-10-13 07:58:31,412 | INFO     | mean y: 2515708.0710784313
[2025-10-13 03:59:26] 2025-10-13 07:58:31,412 | INFO     | -- intersect: 68901391.1588426
[2025-10-13 03:59:26] 2025-10-13 07:58:31,412 | INFO     | intersect: 68901391.1588426
[2025-10-13 03:59:26] 2025-10-13 07:58:31,413 | INFO     | chi2: 1.7975118696504548
[2025-10-13 03:59:26] 2025-10-13 07:58:31,413 | INFO     | current chi2=1.7975118696504548 (change=0.0174851041620135 %)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,413 | INFO     | right removable region: 407
[2025-10-13 03:59:26] 2025-10-13 07:58:31,414 | INFO     | sum of square deviations: 21846868832.232487
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | sum of deviations: -89895331354.44557
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | mean x: 1760329705.2639225
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | mean y: 2522810.0774818403
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | -- intersect: 7245914225.249128
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | intersect: 7245914225.249128
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | chi2: 0.9696793965435637
[2025-10-13 03:59:26] 2025-10-13 07:58:31,417 | INFO     | current chi2=0.9696793965435637 (change=60.93202226756733 %)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,418 | INFO     | sum of square deviations: 21062918174.146965
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | sum of deviations: -87249095346.26474
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | mean x: 1760329857.7794118
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | mean y: 2522295.06372549
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | -- intersect: 7294350821.976413
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | intersect: 7294350821.976413
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | chi2: 0.9696582287972653
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | current chi2=0.9696582287972653 (change=0.002182963397377403 %)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,421 | INFO     | left removable region: 20
[2025-10-13 03:59:26] 2025-10-13 07:58:31,422 | INFO     | sum of square deviations: 17975450236.656387
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | sum of deviations: -17685002130.899235
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | mean x: 1760329827.3385012
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | mean y: 2518402.4496124033
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | -- intersect: 1734404743.9712384
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | intersect: 1734404743.9712384
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | chi2: 0.1054114917972396
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | -- intersect: 1734404743.9712384
[2025-10-13 03:59:26] 2025-10-13 07:58:31,425 | INFO     | current memory leak: -0.98 B/s (using 387 data points, chi2=0.11)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | could have reported an average CPU frequency of 3225 MHz (17 samples)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | ..............................
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . Timing measurements:
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . get job = 0 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . initial setup = 5 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . payload setup = 23 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . stage-in = 0 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . payload execution = 25469 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . stage-out = 2 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,426 | INFO     | . log creation = 0 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,427 | INFO     | ..............................
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | 
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | job summary report
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | --------------------------------------------------
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | PanDA job id: 6840223739
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | task id: 46676269
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | errors: (none)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | pilot state: finished 
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | transexitcode: 0
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | exeerrorcode: 0
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | exeerrordiag: 
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | exitcode: 0
[2025-10-13 03:59:26] 2025-10-13 07:58:31,499 | INFO     | exitmsg: OK
[2025-10-13 03:59:26] 2025-10-13 07:58:31,500 | INFO     | cpuconsumptiontime: 35108 s
[2025-10-13 03:59:26] 2025-10-13 07:58:31,500 | INFO     | nevents: 400
[2025-10-13 03:59:26] 2025-10-13 07:58:31,505 | INFO     | neventsw: 0
[2025-10-13 03:59:26] 2025-10-13 07:58:31,505 | INFO     | pid: 646398
[2025-10-13 03:59:26] 2025-10-13 07:58:31,505 | INFO     | pgrp: 646398
[2025-10-13 03:59:26] 2025-10-13 07:58:31,506 | INFO     | corecount: 8
[2025-10-13 03:59:26] 2025-10-13 07:58:31,510 | INFO     | event service: False
[2025-10-13 03:59:26] 2025-10-13 07:58:31,510 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 18: 2349175, 22: 2349203, 25496: 2385237, 25498: 2394235, 25501: 2394291, 25513: 2394549}
[2025-10-13 03:59:26] 2025-10-13 07:58:31,510 | INFO     | --------------------------------------------------
[2025-10-13 03:59:26] 2025-10-13 07:58:31,510 | INFO     | 
[2025-10-13 03:59:26] 2025-10-13 07:58:31,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 03:59:26] 2025-10-13 07:58:31,559 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,559 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | job 6840223739 has completed (purged errors)
[2025-10-13 03:59:26] 2025-10-13 07:58:31,561 | INFO     | overall cleanup function is called
[2025-10-13 03:59:26] 2025-10-13 07:58:32,028 | INFO     | PID=639861 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 03:59:26] 2025-10-13 07:58:32,028 | INFO     | .. there are 11 such processes running
[2025-10-13 03:59:26] 2025-10-13 07:58:32,571 | INFO     | --- collectZombieJob: --- 10, [646398]
[2025-10-13 03:59:26] 2025-10-13 07:58:32,571 | INFO     | zombie collector waiting for pid 646398
[2025-10-13 03:59:26] 2025-10-13 07:58:32,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:59:26] 2025-10-13 07:58:32,571 | INFO     | collected zombie processes
[2025-10-13 03:59:26] 2025-10-13 07:58:32,571 | INFO     | will attempt to kill all subprocesses of pid=646398
[2025-10-13 03:59:26] 2025-10-13 07:58:32,851 | INFO     | process IDs to be killed: [646398] (in reverse order)
[2025-10-13 03:59:26] 2025-10-13 07:58:32,970 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:59:26] 2025-10-13 07:58:32,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:59:26] 2025-10-13 07:58:32,983 | INFO     | did not find any defunct processes belonging to 646398
[2025-10-13 03:59:26] 2025-10-13 07:58:32,996 | INFO     | did not find any defunct processes belonging to 646398
[2025-10-13 03:59:26] 2025-10-13 07:58:32,996 | INFO     | ready for new job
[2025-10-13 03:59:26] 2025-10-13 07:58:32,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:59:26] 2025-10-13 07:58:33,000 | INFO     | ***************************************
[2025-10-13 03:59:26] 2025-10-13 07:58:33,000 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:59:26] 2025-10-13 07:58:33,000 | INFO     | ***************************************
[2025-10-13 03:59:26] 2025-10-13 07:58:33,000 | INFO     | 
[2025-10-13 03:59:26] 2025-10-13 07:58:33,004 | INFO     | architecture information:
[2025-10-13 03:59:26] 2025-10-13 07:58:33,005 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:59:26] 2025-10-13 07:58:33,117 | INFO     | cat /etc/os-release:
[2025-10-13 03:59:26] NAME="CentOS Linux"
[2025-10-13 03:59:26] VERSION="7 (Core)"
[2025-10-13 03:59:26] ID="centos"
[2025-10-13 03:59:26] ID_LIKE="rhel fedora"
[2025-10-13 03:59:26] VERSION_ID="7"
[2025-10-13 03:59:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:59:26] ANSI_COLOR="0;31"
[2025-10-13 03:59:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:59:26] HOME_URL="https://www.centos.org/"
[2025-10-13 03:59:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:59:26] 
[2025-10-13 03:59:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:59:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:59:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:59:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:59:26] 
[2025-10-13 03:59:26] 2025-10-13 07:58:33,117 | INFO     | ***************************************
[2025-10-13 03:59:26] 2025-10-13 07:58:33,621 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 03:59:26] 2025-10-13 07:58:33,672 | INFO     | sufficient remaining disk space (85054193664 B)
[2025-10-13 03:59:26] 2025-10-13 07:58:33,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:59:26] 2025-10-13 07:58:33,673 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:59:26] 2025-10-13 07:58:33,673 | INFO     | update_server=False
[2025-10-13 03:59:26] 2025-10-13 07:58:33,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:59:26] 2025-10-13 07:58:33,947 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:59:26] 2025-10-13 07:58:33,947 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:59:26] 2025-10-13 07:58:33,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:59:26] 2025-10-13 07:58:33,947 | INFO     | will abort loop
[2025-10-13 03:59:26] 2025-10-13 07:58:33,947 | INFO     | all data control threads have been joined
[2025-10-13 03:59:26] 2025-10-13 07:58:34,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:59:26] 2025-10-13 07:58:34,268 | INFO     | all job control threads have been joined
[2025-10-13 03:59:26] 2025-10-13 07:58:34,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:59:26] 2025-10-13 07:58:34,679 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:34,953 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:34,953 | INFO     | [data] control thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,025 | INFO     | all payload control threads have been joined
[2025-10-13 03:59:26] 2025-10-13 07:58:35,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,069 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,276 | INFO     | [job] control thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,350 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,354 | INFO     | [job] validate thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,441 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,765 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:35,819 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:36,030 | INFO     | [payload] control thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:36,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:59:26] 2025-10-13 07:58:36,540 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:37,517 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:38,234 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:58:44,194 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:59:26] 2025-10-13 07:58:45,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:59:26] 2025-10-13 07:59:04,425 | INFO     | PID=639861 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 03:59:26] 2025-10-13 07:59:04,425 | INFO     | .. there are 11 such processes running
[2025-10-13 03:59:26] 2025-10-13 07:59:04,425 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:59:26] 2025-10-13 07:59:04,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:59:26] 2025-10-13 07:59:04,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:59:26] 2025-10-13 07:59:18,660 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:59:26] 2025-10-13 07:59:20,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694077372224)>', '<ExcThread(monitor, started 140693599155968)>']
[2025-10-13 03:59:26] 2025-10-13 07:59:20,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:59:26] 2025-10-13 07:59:20,520 | INFO     | [monitor] control thread has ended
[2025-10-13 03:59:26] 2025-10-13 07:59:25,220 | INFO     | all workflow threads have been joined
[2025-10-13 03:59:26] 2025-10-13 07:59:25,220 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:59:26] 2025-10-13 07:59:25,221 | INFO     | traces error code: 0
[2025-10-13 03:59:26] 2025-10-13 07:59:25,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:59:26] 2025-10-13 07:59:25,662 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:59:26] 2025-10-13 07:59:25,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:59:26] 2025-10-13 07:59:25,702 [wrapper] pilotpid: 639861
[2025-10-13 03:59:26] 2025-10-13 07:59:25,724 [wrapper] Pilot exit status: 0
[2025-10-13 03:59:26] 2025-10-13 07:59:25,750 [wrapper] pandaids: 6840223739
[2025-10-13 03:59:26] 2025-10-13 07:59:25,826 [wrapper] cleanup supervisor_pilot 1332736 639862
[2025-10-13 03:59:26] 2025-10-13 07:59:25,830 [wrapper] Test setup, not cleaning
[2025-10-13 03:59:26] 2025-10-13 07:59:25,835 [wrapper] apfmon messages muted
[2025-10-13 03:59:26] 2025-10-13 07:59:25,848 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:59:26] 2025-10-13 07:59:25,870 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:59:26]  *** Error codes and diagnostics ***
[2025-10-13 03:59:26]     "exeErrorCode": 0,
[2025-10-13 03:59:26]     "exeErrorDiag": "",
[2025-10-13 03:59:26]     "pilotErrorCode": 0,
[2025-10-13 03:59:26]     "pilotErrorDiag": "",
[2025-10-13 03:59:26]  *** Listing of results directory ***
[2025-10-13 03:59:26] total 413436
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:12 queuedata.json
[2025-10-13 03:59:26] -rwx------. 1 boincer umatlas     36292 Oct 12 11:12 runpilot2-wrapper.sh
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:59:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:51 run_atlas
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:51 job.xml
[2025-10-13 03:59:26] -rw-r--r--. 2 boincer umatlas 223805083 Oct 12 20:51 EVNT.46676267._004556.pool.root.1
[2025-10-13 03:59:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:51 start_atlas.sh
[2025-10-13 03:59:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:51 shared
[2025-10-13 03:59:26] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 20:51 input.tar.gz
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:51 boinc_lockfile
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 20:51 pandaJob.out
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas    975603 Oct 12 20:52 agis_schedconf.cvmfs.json
[2025-10-13 03:59:26] drwx------. 5 boincer umatlas      4096 Oct 12 20:52 pilot3
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas      6900 Oct 13 03:55 init_data.xml
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas 188009780 Oct 13 03:57 HITS.46676269._081843.pool.root.1
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas       531 Oct 13 03:57 boinc_task_state.xml
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas      1044 Oct 13 03:58 memory_monitor_summary.json
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas    585310 Oct 13 03:58 log.46676269._081843.job.log.tgz.1
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas        95 Oct 13 03:58 pilot_heartbeat.json
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas      7788 Oct 13 03:58 heartbeat.json
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:58 boinc_mmap_file
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:58 wrapper_checkpoint.txt
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas      5081 Oct 13 03:59 pilotlog.txt
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas   3238195 Oct 13 03:59 log.46676269._081843.job.log.1
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas       357 Oct 13 03:59 output.list
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:59 runtime_log
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas   3840000 Oct 13 03:59 result.tar.gz
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas       660 Oct 13 03:59 YxALDmUvCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTPkNDmzxKb4m.diag
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 03:59 runtime_log.err
[2025-10-13 03:59:26] -rw-r--r--. 1 boincer umatlas     21146 Oct 13 03:59 stderr.txt
[2025-10-13 03:59:26] HITS file was successfully produced:
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas 188009780 Oct 13 03:57 shared/HITS.pool.root.1
[2025-10-13 03:59:26]  *** Contents of shared directory: ***
[2025-10-13 03:59:26] total 406496
[2025-10-13 03:59:26] -rw-r--r--. 2 boincer umatlas 223805083 Oct 12 20:51 ATLAS.root_0
[2025-10-13 03:59:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:51 start_atlas.sh
[2025-10-13 03:59:26] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 20:51 input.tar.gz
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas 188009780 Oct 13 03:57 HITS.pool.root.1
[2025-10-13 03:59:26] -rw-------. 1 boincer umatlas   3840000 Oct 13 03:59 result.tar.gz
03:59:27 (634725): run_atlas exited; CPU time 35490.073179
03:59:27 (634725): called boinc_finish(0)

</stderr_txt>
]]>

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