Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:21:51 (2488838): wrapper (7.7.26015): starting
20:21:51 (2488838): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:21:51] Arguments: --nthreads 8
[2025-10-12 20:21:51] Threads: 8
[2025-10-12 20:21:51] Checking for CVMFS
[2025-10-12 20:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:21:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:21:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:21:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:21:55] 2.13.2.0 3526814 61142 371112 151642 1 290 25334631 32935936 33423 16776704 0 103533727 99.557 108449056 8109 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:21:55] CVMFS is ok
[2025-10-12 20:21:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:21:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:21:55] Further information can be found at the LHC@home message board.
[2025-10-12 20:21:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:21:55] Checking for apptainer binary...
[2025-10-12 20:21:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:21:55] Running /usr/bin/apptainer --version
[2025-10-12 20:21:56] apptainer version 1.4.3-1.el9
[2025-10-12 20:21:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:21:58] c6-12-25-2.aglt2.org
[2025-10-12 20:21:58] apptainer works
[2025-10-12 20:21:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:21:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:21:58] Starting ATLAS job with PandaID=6840714536
[2025-10-12 20:21:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:10:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:10:17] 2025-10-13 15:09:27,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:10:17] 2025-10-13 15:09:27,890 | INFO     | sum of deviations: 15180491644.489586
[2025-10-13 11:10:17] 2025-10-13 15:09:27,890 | INFO     | mean x: 1760341670.5450346
[2025-10-13 11:10:17] 2025-10-13 15:09:27,891 | INFO     | mean y: 2110537.3464203235
[2025-10-13 11:10:17] 2025-10-13 15:09:27,891 | INFO     | -- intersect: -130575681.2944269
[2025-10-13 11:10:17] 2025-10-13 15:09:27,891 | INFO     | intersect: -130575681.2944269
[2025-10-13 11:10:17] 2025-10-13 15:09:27,913 | INFO     | chi2: 7.676586874996951
[2025-10-13 11:10:17] 2025-10-13 15:09:27,972 | INFO     | sum of square deviations: 197931261318.21198
[2025-10-13 11:10:17] 2025-10-13 15:09:28,555 | INFO     | sum of deviations: 243494477893.31705
[2025-10-13 11:10:17] 2025-10-13 15:09:28,555 | INFO     | mean x: 1760341518.0569105
[2025-10-13 11:10:17] 2025-10-13 15:09:28,556 | INFO     | mean y: 2120577.871080139
[2025-10-13 11:10:17] 2025-10-13 15:09:28,556 | INFO     | -- intersect: -2163446579.1233234
[2025-10-13 11:10:17] 2025-10-13 15:09:28,556 | INFO     | intersect: -2163446579.1233234
[2025-10-13 11:10:17] 2025-10-13 15:09:28,576 | INFO     | chi2: 4.306474925516437
[2025-10-13 11:10:17] 2025-10-13 15:09:28,577 | INFO     | current chi2=4.306474925516437 (change=43.901176451961305 %)
[2025-10-13 11:10:17] 2025-10-13 15:09:28,619 | INFO     | sum of square deviations: 194503193867.19528
[2025-10-13 11:10:17] 2025-10-13 15:09:29,120 | INFO     | sum of deviations: 246974234755.10254
[2025-10-13 11:10:17] 2025-10-13 15:09:29,120 | INFO     | mean x: 1760341365.557243
[2025-10-13 11:10:17] 2025-10-13 15:09:29,121 | INFO     | mean y: 2120732.4672897197
[2025-10-13 11:10:17] 2025-10-13 15:09:29,121 | INFO     | -- intersect: -2233107147.456888
[2025-10-13 11:10:17] 2025-10-13 15:09:29,121 | INFO     | intersect: -2233107147.456888
[2025-10-13 11:10:17] 2025-10-13 15:09:29,171 | INFO     | chi2: 4.303024878171653
[2025-10-13 11:10:17] 2025-10-13 15:09:29,172 | INFO     | current chi2=4.303024878171653 (change=0.08011302525743402 %)
[2025-10-13 11:10:17] 2025-10-13 15:09:29,172 | INFO     | right removable region: 855
[2025-10-13 11:10:17] 2025-10-13 15:09:29,220 | INFO     | sum of square deviations: 197930339129.54266
[2025-10-13 11:10:17] 2025-10-13 15:09:29,714 | INFO     | sum of deviations: -182941005560.7073
[2025-10-13 11:10:17] 2025-10-13 15:09:29,714 | INFO     | mean x: 1760341823.0534263
[2025-10-13 11:10:17] 2025-10-13 15:09:29,715 | INFO     | mean y: 2119242.3414634145
[2025-10-13 11:10:17] 2025-10-13 15:09:29,715 | INFO     | -- intersect: 1629149765.5862734
[2025-10-13 11:10:17] 2025-10-13 15:09:29,715 | INFO     | intersect: 1629149765.5862734
[2025-10-13 11:10:17] 2025-10-13 15:09:29,719 | INFO     | chi2: 4.972151150726183
[2025-10-13 11:10:17] 2025-10-13 15:09:29,719 | INFO     | current chi2=4.972151150726183 (change=35.229663499012275 %)
[2025-10-13 11:10:17] 2025-10-13 15:09:29,736 | INFO     | sum of square deviations: 194501874194.71872
[2025-10-13 11:10:17] 2025-10-13 15:09:30,163 | INFO     | sum of deviations: -268636460870.7909
[2025-10-13 11:10:17] 2025-10-13 15:09:30,164 | INFO     | mean x: 1760341975.5619159
[2025-10-13 11:10:17] 2025-10-13 15:09:30,165 | INFO     | mean y: 2123052.043224299
[2025-10-13 11:10:17] 2025-10-13 15:09:30,165 | INFO     | -- intersect: 2433421157.499165
[2025-10-13 11:10:17] 2025-10-13 15:09:30,165 | INFO     | intersect: 2433421157.499165
[2025-10-13 11:10:17] 2025-10-13 15:09:30,193 | INFO     | chi2: 4.453565308359178
[2025-10-13 11:10:17] 2025-10-13 15:09:30,194 | INFO     | current chi2=4.453565308359178 (change=10.429808480204086 %)
[2025-10-13 11:10:17] 2025-10-13 15:09:30,195 | INFO     | left removable region: 20
[2025-10-13 11:10:17] 2025-10-13 15:09:30,233 | INFO     | sum of square deviations: 180535746422.78357
[2025-10-13 11:10:17] 2025-10-13 15:09:30,313 | INFO     | monitor loop #1557: job 0:6840714536 is in state 'finished'
[2025-10-13 11:10:17] 2025-10-13 15:09:30,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:10:17] 2025-10-13 15:09:30,424 | INFO     | sum of deviations: -109781675564.80827
[2025-10-13 11:10:17] 2025-10-13 15:09:30,425 | INFO     | mean x: 1760341945.079042
[2025-10-13 11:10:17] 2025-10-13 15:09:30,425 | INFO     | mean y: 2137082.239520958
[2025-10-13 11:10:17] 2025-10-13 15:09:30,426 | INFO     | -- intersect: 1072580427.2667437
[2025-10-13 11:10:17] 2025-10-13 15:09:30,426 | INFO     | intersect: 1072580427.2667437
[2025-10-13 11:10:17] 2025-10-13 15:09:30,431 | INFO     | chi2: 0.7607138512826639
[2025-10-13 11:10:17] 2025-10-13 15:09:30,432 | INFO     | -- intersect: 1072580427.2667437
[2025-10-13 11:10:17] 2025-10-13 15:09:30,432 | INFO     | current memory leak: -0.61 B/s (using 835 data points, chi2=0.76)
[2025-10-13 11:10:17] 2025-10-13 15:09:30,435 | INFO     | could have reported an average CPU frequency of 999 MHz (32 samples)
[2025-10-13 11:10:17] 2025-10-13 15:09:30,436 | INFO     | ..............................
[2025-10-13 11:10:17] 2025-10-13 15:09:30,437 | INFO     | . Timing measurements:
[2025-10-13 11:10:17] 2025-10-13 15:09:30,437 | INFO     | . get job = 1 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,437 | INFO     | . initial setup = 10 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,437 | INFO     | . payload setup = 74 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,438 | INFO     | . stage-in = 0 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,438 | INFO     | . payload execution = 52839 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,438 | INFO     | . stage-out = 14 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,438 | INFO     | . log creation = 4 s
[2025-10-13 11:10:17] 2025-10-13 15:09:30,438 | INFO     | ..............................
[2025-10-13 11:10:17] 2025-10-13 15:09:32,758 | INFO     | 
[2025-10-13 11:10:17] 2025-10-13 15:09:32,783 | INFO     | job summary report
[2025-10-13 11:10:17] 2025-10-13 15:09:32,784 | INFO     | --------------------------------------------------
[2025-10-13 11:10:17] 2025-10-13 15:09:32,784 | INFO     | PanDA job id: 6840714536
[2025-10-13 11:10:17] 2025-10-13 15:09:32,784 | INFO     | task id: 46676269
[2025-10-13 11:10:17] 2025-10-13 15:09:32,784 | INFO     | errors: (none)
[2025-10-13 11:10:17] 2025-10-13 15:09:32,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:10:17] 2025-10-13 15:09:32,785 | INFO     | pilot state: finished 
[2025-10-13 11:10:17] 2025-10-13 15:09:32,785 | INFO     | transexitcode: 0
[2025-10-13 11:10:17] 2025-10-13 15:09:32,785 | INFO     | exeerrorcode: 0
[2025-10-13 11:10:17] 2025-10-13 15:09:32,785 | INFO     | exeerrordiag: 
[2025-10-13 11:10:17] 2025-10-13 15:09:32,785 | INFO     | exitcode: 0
[2025-10-13 11:10:17] 2025-10-13 15:09:32,786 | INFO     | exitmsg: OK
[2025-10-13 11:10:17] 2025-10-13 15:09:32,786 | INFO     | cpuconsumptiontime: 109669 s
[2025-10-13 11:10:17] 2025-10-13 15:09:32,786 | INFO     | nevents: 400
[2025-10-13 11:10:17] 2025-10-13 15:09:32,786 | INFO     | neventsw: 0
[2025-10-13 11:10:17] 2025-10-13 15:09:32,786 | INFO     | pid: 2504474
[2025-10-13 11:10:17] 2025-10-13 15:09:32,786 | INFO     | pgrp: 2504474
[2025-10-13 11:10:17] 2025-10-13 15:09:32,787 | INFO     | corecount: 8
[2025-10-13 11:10:17] 2025-10-13 15:09:32,787 | INFO     | event service: False
[2025-10-13 11:10:17] 2025-10-13 15:09:32,827 | INFO     | sizes: {0: 2348628, 1: 2348712, 3: 2348883, 4: 2348911, 5: 2348939, 17: 2348995, 28: 2349151, 41: 2349179, 53: 2349207, 57: 2349497, 64: 2349525, 52920: 2393339, 5
[2025-10-13 11:10:17] 2025-10-13 15:09:32,828 | INFO     | --------------------------------------------------
[2025-10-13 11:10:17] 2025-10-13 15:09:32,828 | INFO     | 
[2025-10-13 11:10:17] 2025-10-13 15:09:32,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 11:10:17] 2025-10-13 15:09:33,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,091 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,099 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:10:17] 2025-10-13 15:09:33,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,099 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:10:17] 2025-10-13 15:09:33,100 | INFO     | job 6840714536 has completed (purged errors)
[2025-10-13 11:10:17] 2025-10-13 15:09:33,100 | INFO     | overall cleanup function is called
[2025-10-13 11:10:17] 2025-10-13 15:09:34,131 | INFO     | --- collectZombieJob: --- 10, [2504474]
[2025-10-13 11:10:17] 2025-10-13 15:09:34,132 | INFO     | zombie collector waiting for pid 2504474
[2025-10-13 11:10:17] 2025-10-13 15:09:34,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:10:17] 2025-10-13 15:09:34,132 | INFO     | collected zombie processes
[2025-10-13 11:10:17] 2025-10-13 15:09:34,133 | INFO     | will attempt to kill all subprocesses of pid=2504474
[2025-10-13 11:10:17] 2025-10-13 15:09:37,604 | INFO     | PID=2495159 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:10:17] 2025-10-13 15:09:37,604 | INFO     | .. there are 32 such processes running
[2025-10-13 11:10:17] 2025-10-13 15:09:40,636 | INFO     | process IDs to be killed: [2504474] (in reverse order)
[2025-10-13 11:10:17] 2025-10-13 15:09:42,503 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:10:17] 2025-10-13 15:09:42,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:10:17] 2025-10-13 15:09:42,718 | INFO     | did not find any defunct processes belonging to 2504474
[2025-10-13 11:10:17] 2025-10-13 15:09:42,897 | INFO     | did not find any defunct processes belonging to 2504474
[2025-10-13 11:10:17] 2025-10-13 15:09:42,898 | INFO     | ready for new job
[2025-10-13 11:10:17] 2025-10-13 15:09:42,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:10:17] 2025-10-13 15:09:42,939 | INFO     | ***************************************
[2025-10-13 11:10:17] 2025-10-13 15:09:42,940 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:10:17] 2025-10-13 15:09:42,940 | INFO     | ***************************************
[2025-10-13 11:10:17] 2025-10-13 15:09:42,940 | INFO     | 
[2025-10-13 11:10:17] 2025-10-13 15:09:43,011 | INFO     | architecture information:
[2025-10-13 11:10:17] 2025-10-13 15:09:43,050 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:10:17] 2025-10-13 15:09:43,291 | INFO     | cat /etc/os-release:
[2025-10-13 11:10:17] NAME="CentOS Linux"
[2025-10-13 11:10:17] VERSION="7 (Core)"
[2025-10-13 11:10:17] ID="centos"
[2025-10-13 11:10:17] ID_LIKE="rhel fedora"
[2025-10-13 11:10:17] VERSION_ID="7"
[2025-10-13 11:10:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:10:17] ANSI_COLOR="0;31"
[2025-10-13 11:10:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:10:17] HOME_URL="https://www.centos.org/"
[2025-10-13 11:10:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:10:17] 
[2025-10-13 11:10:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:10:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:10:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:10:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:10:17] 
[2025-10-13 11:10:17] 2025-10-13 15:09:43,292 | INFO     | ***************************************
[2025-10-13 11:10:17] 2025-10-13 15:09:43,796 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 11:10:17] 2025-10-13 15:09:44,003 | INFO     | sufficient remaining disk space (94259642368 B)
[2025-10-13 11:10:17] 2025-10-13 15:09:44,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:10:17] 2025-10-13 15:09:44,005 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:10:17] 2025-10-13 15:09:44,005 | INFO     | update_server=False
[2025-10-13 11:10:17] 2025-10-13 15:09:44,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:10:17] 2025-10-13 15:09:44,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:10:17] 2025-10-13 15:09:44,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:10:17] 2025-10-13 15:09:44,147 | INFO     | aborting loop
[2025-10-13 11:10:17] 2025-10-13 15:09:44,474 | INFO     | all data control threads have been joined
[2025-10-13 11:10:17] 2025-10-13 15:09:45,005 | INFO     | all payload control threads have been joined
[2025-10-13 11:10:17] 2025-10-13 15:09:45,031 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,118 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,154 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,384 | INFO     | all job control threads have been joined
[2025-10-13 11:10:17] 2025-10-13 15:09:45,499 | INFO     | [data] control thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:10:17] 2025-10-13 15:09:45,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:10:17] 2025-10-13 15:09:45,619 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,642 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,643 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:45,660 | INFO     | [job] validate thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:46,011 | INFO     | [payload] control thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:46,037 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:46,390 | INFO     | [job] control thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:46,480 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:46,497 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:46,576 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:49,644 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:10:17] 2025-10-13 15:09:49,937 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:10:17] 2025-10-13 15:09:50,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531782563648)>', '<ExcThread(monitor, started 140531430569728)>']
[2025-10-13 11:10:17] 2025-10-13 15:09:55,878 | INFO     | all workflow threads have been joined
[2025-10-13 11:10:17] 2025-10-13 15:09:55,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:10:17] 2025-10-13 15:09:55,880 | INFO     | traces error code: 0
[2025-10-13 11:10:17] 2025-10-13 15:09:55,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:10:17] 2025-10-13 15:10:15,548 | INFO     | PID=2495159 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:10:17] 2025-10-13 15:10:15,549 | INFO     | .. there are 32 such processes running
[2025-10-13 11:10:17] 2025-10-13 15:10:15,551 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:10:17] 2025-10-13 15:10:15,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:10:17] 2025-10-13 15:10:15,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:10:17] 2025-10-13 15:10:15,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:10:17] 2025-10-13 15:10:15,552 | INFO     | [monitor] control thread has ended
[2025-10-13 11:10:17] 2025-10-13 15:10:15,939 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:10:17] 2025-10-13 15:10:15,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:10:17] 2025-10-13 15:10:15,990 [wrapper] pilotpid: 2495159
[2025-10-13 11:10:17] 2025-10-13 15:10:16,027 [wrapper] Pilot exit status: 0
[2025-10-13 11:10:17] 2025-10-13 15:10:16,204 [wrapper] pandaids: 6840714536
[2025-10-13 11:10:17] 2025-10-13 15:10:16,910 [wrapper] cleanup supervisor_pilot  508680 2495160
[2025-10-13 11:10:17] 2025-10-13 15:10:16,927 [wrapper] Test setup, not cleaning
[2025-10-13 11:10:17] 2025-10-13 15:10:16,934 [wrapper] apfmon messages muted
[2025-10-13 11:10:17] 2025-10-13 15:10:16,940 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:10:17] 2025-10-13 15:10:16,946 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:10:17]  *** Error codes and diagnostics ***
[2025-10-13 11:10:17]     "exeErrorCode": 0,
[2025-10-13 11:10:17]     "exeErrorDiag": "",
[2025-10-13 11:10:17]     "pilotErrorCode": 0,
[2025-10-13 11:10:17]     "pilotErrorDiag": "",
[2025-10-13 11:10:17]  *** Listing of results directory ***
[2025-10-13 11:10:17] total 414604
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-13 11:10:17] -rwx------. 1 boincer umatlas     36292 Oct 12 15:50 runpilot2-wrapper.sh
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:50 queuedata.json
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:10:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:21 run_atlas
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:21 job.xml
[2025-10-13 11:10:17] -rw-r--r--. 2 boincer umatlas 221861643 Oct 12 20:21 EVNT.46676267._004472.pool.root.1
[2025-10-13 11:10:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:21 shared
[2025-10-13 11:10:17] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 20:21 input.tar.gz
[2025-10-13 11:10:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:21 start_atlas.sh
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:21 boinc_lockfile
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 20:21 pandaJob.out
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas    975603 Oct 12 20:23 agis_schedconf.cvmfs.json
[2025-10-13 11:10:17] drwx------. 5 boincer umatlas      4096 Oct 12 20:24 pilot3
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas 189062902 Oct 13 11:02 HITS.46676269._087932.pool.root.1
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas       532 Oct 13 11:03 boinc_task_state.xml
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas      1044 Oct 13 11:07 memory_monitor_summary.json
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas    758376 Oct 13 11:08 log.46676269._087932.job.log.tgz.1
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas      7840 Oct 13 11:09 heartbeat.json
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 11:09 init_data.xml
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas        29 Oct 13 11:09 wrapper_checkpoint.txt
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas        95 Oct 13 11:10 pilot_heartbeat.json
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas       823 Oct 13 11:10 pilotlog.txt
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas   4102569 Oct 13 11:10 log.46676269._087932.job.log.1
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas       357 Oct 13 11:10 output.list
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:10 runtime_log
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas   4884480 Oct 13 11:10 result.tar.gz
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:10 boinc_mmap_file
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 11:10 runtime_log.err
[2025-10-13 11:10:17] -rw-------. 1 boincer umatlas       662 Oct 13 11:10 nuNMDmqGHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzrUMDmcz1I2m.diag
[2025-10-13 11:10:17] -rw-r--r--. 1 boincer umatlas     21265 Oct 13 11:10 stderr.txt
[2025-10-13 11:10:17] HITS file was successfully produced:
[2025-10-13 11:10:18] -rw-------. 1 boincer umatlas 189062902 Oct 13 11:02 shared/HITS.pool.root.1
[2025-10-13 11:10:18]  *** Contents of shared directory: ***
[2025-10-13 11:10:18] total 406652
[2025-10-13 11:10:18] -rw-r--r--. 2 boincer umatlas 221861643 Oct 12 20:21 ATLAS.root_0
[2025-10-13 11:10:18] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 20:21 input.tar.gz
[2025-10-13 11:10:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:21 start_atlas.sh
[2025-10-13 11:10:18] -rw-------. 1 boincer umatlas 189062902 Oct 13 11:02 HITS.pool.root.1
[2025-10-13 11:10:18] -rw-------. 1 boincer umatlas   4884480 Oct 13 11:10 result.tar.gz
11:10:40 (2488838): run_atlas exited; CPU time 113912.315928
11:10:40 (2488838): called boinc_finish(0)

</stderr_txt>
]]>

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