Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:57:28 (2199799): wrapper (7.7.26015): starting
09:57:28 (2199799): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 09:57:28] Arguments: --nthreads 4
[2025-10-14 09:57:28] Threads: 4
[2025-10-14 09:57:28] Checking for CVMFS
[2025-10-14 09:57:28] No cvmfs_config command found, will try listing directly
[2025-10-14 09:57:28] CVMFS is ok
[2025-10-14 09:57:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 09:57:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 09:57:28] Further information can be found at the LHC@home message board.
[2025-10-14 09:57:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 09:57:28] Checking for apptainer binary...
[2025-10-14 09:57:28] which: no apptainer in ((null))
[2025-10-14 09:57:28] apptainer is not installed, using version from CVMFS
[2025-10-14 09:57:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 09:57:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-10-14 09:57:28] apptainer works
[2025-10-14 09:57:28] Set ATHENA_PROC_NUMBER=4
[2025-10-14 09:57:28] Set ATHENA_CORE_NUMBER=4
[2025-10-14 09:57:28] Starting ATLAS job with PandaID=6840715374
[2025-10-14 09:57:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 13:36:14]  *** The last 200 lines of the pilot log: ***
[2025-10-14 13:36:14] 2025-10-14 10:45:30,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 13:36:14] 2025-10-14 10:45:30,734 | INFO     | fitting pss+swap vs Time
[2025-10-14 13:36:14] 2025-10-14 10:45:30,734 | INFO     | sum of square deviations: 1392881930.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,735 | INFO     | sum of deviations: 14012726630.000002
[2025-10-14 13:36:14] 2025-10-14 10:45:30,735 | INFO     | mean x: 1760433695.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,735 | INFO     | mean y: 2298868.393939394
[2025-10-14 13:36:14] 2025-10-14 10:45:30,735 | INFO     | -- intersect: -17708086762.264503
[2025-10-14 13:36:14] 2025-10-14 10:45:30,735 | INFO     | intersect: -17708086762.264503
[2025-10-14 13:36:14] 2025-10-14 10:45:30,736 | INFO     | chi2: 1.9766516723611234
[2025-10-14 13:36:14] 2025-10-14 10:45:30,736 | INFO     | sum of square deviations: 1270051720.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,737 | INFO     | sum of deviations: 22721391599.499996
[2025-10-14 13:36:14] 2025-10-14 10:45:30,737 | INFO     | mean x: 1760433542.5
[2025-10-14 13:36:14] 2025-10-14 10:45:30,737 | INFO     | mean y: 2309391.73125
[2025-10-14 13:36:14] 2025-10-14 10:45:30,737 | INFO     | -- intersect: -31492077233.750046
[2025-10-14 13:36:14] 2025-10-14 10:45:30,737 | INFO     | intersect: -31492077233.750046
[2025-10-14 13:36:14] 2025-10-14 10:45:30,738 | INFO     | chi2: 1.3102959335661828
[2025-10-14 13:36:14] 2025-10-14 10:45:30,738 | INFO     | current chi2=1.3102959335661828 (change=33.71133862948014 %)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,738 | INFO     | sum of square deviations: 1154663510.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,739 | INFO     | sum of deviations: 21788342279.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,739 | INFO     | mean x: 1760433390.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,739 | INFO     | mean y: 2308158.1354838707
[2025-10-14 13:36:14] 2025-10-14 10:45:30,739 | INFO     | -- intersect: -33216828783.933723
[2025-10-14 13:36:14] 2025-10-14 10:45:30,739 | INFO     | intersect: -33216828783.933723
[2025-10-14 13:36:14] 2025-10-14 10:45:30,740 | INFO     | chi2: 1.3113453506276007
[2025-10-14 13:36:14] 2025-10-14 10:45:30,740 | INFO     | current chi2=1.3113453506276007 (change=-0.08009007999908575 %)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,740 | INFO     | right removable region: 154
[2025-10-14 13:36:14] 2025-10-14 10:45:30,740 | INFO     | sum of square deviations: 1270051720.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,741 | INFO     | sum of deviations: -6138297111.5
[2025-10-14 13:36:14] 2025-10-14 10:45:30,741 | INFO     | mean x: 1760433847.5
[2025-10-14 13:36:14] 2025-10-14 10:45:30,741 | INFO     | mean y: 2323471.43125
[2025-10-14 13:36:14] 2025-10-14 10:45:30,742 | INFO     | -- intersect: 8510690359.904171
[2025-10-14 13:36:14] 2025-10-14 10:45:30,742 | INFO     | intersect: 8510690359.904171
[2025-10-14 13:36:14] 2025-10-14 10:45:30,742 | INFO     | chi2: 0.6867308193565448
[2025-10-14 13:36:14] 2025-10-14 10:45:30,742 | INFO     | current chi2=0.6867308193565448 (change=65.25787375899971 %)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,742 | INFO     | sum of square deviations: 1154663510.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,743 | INFO     | sum of deviations: -5903584270.000001
[2025-10-14 13:36:14] 2025-10-14 10:45:30,743 | INFO     | mean x: 1760434000.0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,743 | INFO     | mean y: 2323156.1548387096
[2025-10-14 13:36:14] 2025-10-14 10:45:30,744 | INFO     | -- intersect: 9003101634.703262
[2025-10-14 13:36:14] 2025-10-14 10:45:30,744 | INFO     | intersect: 9003101634.703262
[2025-10-14 13:36:14] 2025-10-14 10:45:30,744 | INFO     | chi2: 0.6869849152049122
[2025-10-14 13:36:14] 2025-10-14 10:45:30,744 | INFO     | current chi2=0.6869849152049122 (change=-0.03700079291701589 %)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,744 | INFO     | left removable region: 20
[2025-10-14 13:36:14] 2025-10-14 10:45:30,745 | INFO     | sum of square deviations: 746051197.5
[2025-10-14 13:36:14] 2025-10-14 10:45:30,745 | INFO     | sum of deviations: 2466406594.9999995
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | mean x: 1760433969.5
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | mean y: 2334809.552238806
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | -- intersect: -5817568659.521448
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | intersect: -5817568659.521448
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | chi2: 0.00015231784296340127
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | -- intersect: -5817568659.521448
[2025-10-14 13:36:14] 2025-10-14 10:45:30,746 | INFO     | current memory leak: 3.31 B/s (using 134 data points, chi2=0.00)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,747 | INFO     | could have reported an average CPU frequency of 2690 MHz (9 samples)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,747 | INFO     | ..............................
[2025-10-14 13:36:14] 2025-10-14 10:45:30,747 | INFO     | . Timing measurements:
[2025-10-14 13:36:14] 2025-10-14 10:45:30,747 | INFO     | . get job = 0 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,747 | INFO     | . initial setup = 1 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,747 | INFO     | . payload setup = 7 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,748 | INFO     | . stage-in = 0 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,748 | INFO     | . payload execution = 10027 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,748 | INFO     | . stage-out = 0 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,748 | INFO     | . log creation = 0 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,748 | INFO     | ..............................
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | 
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | job summary report
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | --------------------------------------------------
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | PanDA job id: 6840715374
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | task id: 46676269
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | errors: (none)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | pilot state: finished 
[2025-10-14 13:36:14] 2025-10-14 10:45:30,859 | INFO     | transexitcode: 0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | exeerrorcode: 0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | exeerrordiag: 
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | exitcode: 0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | exitmsg: OK
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | cpuconsumptiontime: 38498 s
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | nevents: 400
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | neventsw: 0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | pid: 2211366
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | pgrp: 2211366
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | corecount: 4
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | event service: False
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | sizes: {0: 2348818, 1: 2348818, 7: 2349108, 11: 2349136, 10038: 2378213, 10039: 2378212, 10040: 2387418, 10043: 2387474, 10052: 2387760}
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | --------------------------------------------------
[2025-10-14 13:36:14] 2025-10-14 10:45:30,860 | INFO     | 
[2025-10-14 13:36:14] 2025-10-14 10:45:30,861 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-14 13:36:14] 2025-10-14 10:45:30,895 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,895 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,895 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 13:36:14] 2025-10-14 10:45:30,897 | INFO     | job 6840715374 has completed (purged errors)
[2025-10-14 13:36:14] 2025-10-14 10:45:30,898 | INFO     | overall cleanup function is called
[2025-10-14 13:36:14] 2025-10-14 10:45:31,907 | INFO     | --- collectZombieJob: --- 10, [2211366]
[2025-10-14 13:36:14] 2025-10-14 10:45:31,907 | INFO     | zombie collector waiting for pid 2211366
[2025-10-14 13:36:14] 2025-10-14 10:45:31,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 13:36:14] 2025-10-14 10:45:31,907 | INFO     | collected zombie processes
[2025-10-14 13:36:14] 2025-10-14 10:45:31,907 | INFO     | will attempt to kill all subprocesses of pid=2211366
[2025-10-14 13:36:14] 2025-10-14 10:45:32,731 | INFO     | process IDs to be killed: [2211366] (in reverse order)
[2025-10-14 13:36:14] 2025-10-14 10:45:32,997 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 13:36:14] 2025-10-14 10:45:32,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 13:36:14] 2025-10-14 10:45:33,031 | INFO     | did not find any defunct processes belonging to 2211366
[2025-10-14 13:36:14] 2025-10-14 10:45:33,063 | INFO     | did not find any defunct processes belonging to 2211366
[2025-10-14 13:36:14] 2025-10-14 10:45:33,064 | INFO     | ready for new job
[2025-10-14 13:36:14] 2025-10-14 10:45:33,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 13:36:14] 2025-10-14 10:45:33,066 | INFO     | ***************************************
[2025-10-14 13:36:14] 2025-10-14 10:45:33,066 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 13:36:14] 2025-10-14 10:45:33,067 | INFO     | ***************************************
[2025-10-14 13:36:14] 2025-10-14 10:45:33,067 | INFO     | 
[2025-10-14 13:36:14] 2025-10-14 10:45:33,075 | INFO     | architecture information:
[2025-10-14 13:36:14] 2025-10-14 10:45:33,075 | INFO     | executing command: cat /etc/os-release
[2025-10-14 13:36:14] 2025-10-14 10:45:33,099 | INFO     | cat /etc/os-release:
[2025-10-14 13:36:14] NAME="CentOS Linux"
[2025-10-14 13:36:14] VERSION="7 (Core)"
[2025-10-14 13:36:14] ID="centos"
[2025-10-14 13:36:14] ID_LIKE="rhel fedora"
[2025-10-14 13:36:14] VERSION_ID="7"
[2025-10-14 13:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 13:36:14] ANSI_COLOR="0;31"
[2025-10-14 13:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 13:36:14] HOME_URL="https://www.centos.org/"
[2025-10-14 13:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 13:36:14] 
[2025-10-14 13:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 13:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 13:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 13:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 13:36:14] 
[2025-10-14 13:36:14] 2025-10-14 10:45:33,099 | INFO     | ***************************************
[2025-10-14 13:36:14] 2025-10-14 10:45:33,602 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-14 13:36:14] 2025-10-14 10:45:33,625 | INFO     | sufficient remaining disk space (3356479193088 B)
[2025-10-14 13:36:14] 2025-10-14 10:45:33,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 13:36:14] 2025-10-14 10:45:33,626 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 13:36:14] 2025-10-14 10:45:33,626 | INFO     | update_server=False
[2025-10-14 13:36:14] 2025-10-14 10:45:33,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 13:36:14] 2025-10-14 10:45:33,978 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 13:36:14] 2025-10-14 10:45:33,979 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 13:36:14] 2025-10-14 10:45:33,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:36:14] 2025-10-14 10:45:33,979 | INFO     | will abort loop
[2025-10-14 13:36:14] 2025-10-14 10:45:34,035 | INFO     | all data control threads have been joined
[2025-10-14 13:36:14] 2025-10-14 10:45:34,114 | INFO     | all job control threads have been joined
[2025-10-14 13:36:14] 2025-10-14 10:45:34,223 | INFO     | all payload control threads have been joined
[2025-10-14 13:36:14] 2025-10-14 10:45:34,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 13:36:14] 2025-10-14 10:45:34,632 | INFO     | [job] retrieve thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:34,698 | INFO     | [payload] failed_post thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:34,755 | INFO     | [data] copytool_in thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:34,835 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:34,985 | INFO     | [job] job monitor thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:35,041 | INFO     | [data] control thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:35,120 | INFO     | [job] control thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:35,226 | INFO     | [payload] control thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:35,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:35,754 | INFO     | [job] validate thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:35,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:36:14] 2025-10-14 10:45:35,884 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:36,056 | INFO     | [payload] validate_post thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:36,118 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:36,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 13:36:14] 2025-10-14 10:45:36,520 | INFO     | [data] copytool_out thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:36,875 | INFO     | [job] queue monitor thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:40,458 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 13:36:14] 2025-10-14 10:45:57,693 | INFO     | [monitor] cgroup control has ended
[2025-10-14 13:36:14] 2025-10-14 10:45:58,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22452694513472)>', '<ExcThread(monitor, started 22452457408256)>']
[2025-10-14 13:36:14] 2025-10-14 10:46:03,036 | INFO     | PID=2203884 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 13:36:14] 2025-10-14 10:46:03,037 | INFO     | .. there are 12 such processes running
[2025-10-14 13:36:14] 2025-10-14 10:46:03,037 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 13:36:14] 2025-10-14 10:46:03,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 13:36:14] 2025-10-14 10:46:03,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 13:36:14] 2025-10-14 10:46:03,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 13:36:14] 2025-10-14 10:46:03,037 | INFO     | [monitor] control thread has ended
[2025-10-14 13:36:14] 2025-10-14 10:46:03,354 | INFO     | all workflow threads have been joined
[2025-10-14 13:36:14] 2025-10-14 10:46:03,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 13:36:14] 2025-10-14 10:46:03,355 | INFO     | traces error code: 0
[2025-10-14 13:36:14] 2025-10-14 10:46:03,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 13:36:14] 2025-10-14 10:46:03,585 [wrapper] ==== pilot stdout END ====
[2025-10-14 13:36:14] 2025-10-14 10:46:03,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 13:36:14] 2025-10-14 10:46:03,593 [wrapper] pilotpid: 2203884
[2025-10-14 13:36:14] 2025-10-14 10:46:03,599 [wrapper] Pilot exit status: 0
[2025-10-14 13:36:14] 2025-10-14 10:46:03,615 [wrapper] pandaids: 6840715374
[2025-10-14 13:36:14] 2025-10-14 10:46:03,787 [wrapper] cleanup supervisor_pilot 2755885 2203885
[2025-10-14 13:36:14] 2025-10-14 10:46:03,792 [wrapper] Test setup, not cleaning
[2025-10-14 13:36:14] 2025-10-14 10:46:03,796 [wrapper] apfmon messages muted
[2025-10-14 13:36:14] 2025-10-14 10:46:03,800 [wrapper] ==== wrapper stdout END ====
[2025-10-14 13:36:14] 2025-10-14 10:46:03,803 [wrapper] ==== wrapper stderr END ====
[2025-10-14 13:36:14]  *** Error codes and diagnostics ***
[2025-10-14 13:36:14]     "exeErrorCode": 0,
[2025-10-14 13:36:14]     "exeErrorDiag": "",
[2025-10-14 13:36:14]     "pilotErrorCode": 0,
[2025-10-14 13:36:14]     "pilotErrorDiag": "",
[2025-10-14 13:36:14]  *** Listing of results directory ***
[2025-10-14 13:36:14] total 412964
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:07 queuedata.json
[2025-10-14 13:36:14] -rwx------ 1 boinc boinc     36292 Oct 12 22:08 runpilot2-wrapper.sh
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc       100 Oct 14 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 13:36:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 09:57 run_atlas
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc       105 Oct 14 09:57 job.xml
[2025-10-14 13:36:14] -rw-r--r-- 2 boinc boinc 220041501 Oct 14 09:57 EVNT.46676267._004487.pool.root.1
[2025-10-14 13:36:14] -rw-r--r-- 2 boinc boinc     15120 Oct 14 09:57 start_atlas.sh
[2025-10-14 13:36:14] drwxrwx--x 2 boinc boinc      4096 Oct 14 09:57 shared
[2025-10-14 13:36:14] -rw-r--r-- 2 boinc boinc    569677 Oct 14 09:57 input.tar.gz
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc         0 Oct 14 09:57 boinc_lockfile
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc      2549 Oct 14 09:57 pandaJob.out
[2025-10-14 13:36:14] -rw------- 1 boinc boinc    972807 Oct 14 09:57 agis_schedconf.cvmfs.json
[2025-10-14 13:36:14] -rw------- 1 boinc boinc   1560580 Oct 14 09:57 agis_ddmendpoints.agis.ALL.json
[2025-10-14 13:36:14] drwx------ 5 boinc boinc      4096 Oct 14 09:57 pilot3
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc      6691 Oct 14 10:00 init_data.xml
[2025-10-14 13:36:14] -rw------- 1 boinc boinc 195421332 Oct 14 12:44 HITS.46676269._088326.pool.root.1
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc       528 Oct 14 12:45 boinc_task_state.xml
[2025-10-14 13:36:14] -rw------- 1 boinc boinc        95 Oct 14 12:45 pilot_heartbeat.json
[2025-10-14 13:36:14] -rw------- 1 boinc boinc      1020 Oct 14 12:45 memory_monitor_summary.json
[2025-10-14 13:36:14] -rw------- 1 boinc boinc    350033 Oct 14 12:45 log.46676269._088326.job.log.tgz.1
[2025-10-14 13:36:14] -rw------- 1 boinc boinc      7779 Oct 14 12:45 heartbeat.json
[2025-10-14 13:36:14] -rw------- 1 boinc boinc      5022 Oct 14 12:46 pilotlog.txt
[2025-10-14 13:36:14] -rw------- 1 boinc boinc   1407445 Oct 14 12:46 log.46676269._088326.job.log.1
[2025-10-14 13:36:14] -rw------- 1 boinc boinc       357 Oct 14 12:46 output.list
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc       620 Oct 14 12:46 runtime_log
[2025-10-14 13:36:14] -rw------- 1 boinc boinc   1771520 Oct 14 12:46 result.tar.gz
[2025-10-14 13:36:14] -rw------- 1 boinc boinc       665 Oct 14 12:46 shfNDm2XHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPOlNDm6tuFTm.diag
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc      9085 Oct 14 12:46 runtime_log.err
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc        26 Oct 14 13:35 wrapper_checkpoint.txt
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc      8192 Oct 14 13:36 boinc_mmap_file
[2025-10-14 13:36:14] -rw-r--r-- 1 boinc boinc     20731 Oct 14 13:36 stderr.txt
[2025-10-14 13:36:14] HITS file was successfully produced:
[2025-10-14 13:36:14] -rw------- 1 boinc boinc 195421332 Oct 14 12:44 shared/HITS.pool.root.1
[2025-10-14 13:36:14]  *** Contents of shared directory: ***
[2025-10-14 13:36:14] total 408044
[2025-10-14 13:36:14] -rw-r--r-- 2 boinc boinc 220041501 Oct 14 09:57 ATLAS.root_0
[2025-10-14 13:36:14] -rw-r--r-- 2 boinc boinc     15120 Oct 14 09:57 start_atlas.sh
[2025-10-14 13:36:14] -rw-r--r-- 2 boinc boinc    569677 Oct 14 09:57 input.tar.gz
[2025-10-14 13:36:14] -rw------- 1 boinc boinc 195421332 Oct 14 12:44 HITS.pool.root.1
[2025-10-14 13:36:14] -rw------- 1 boinc boinc   1771520 Oct 14 12:46 result.tar.gz
13:36:15 (2199799): run_atlas exited; CPU time 39174.302944
13:36:15 (2199799): called boinc_finish(0)

</stderr_txt>
]]>

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