Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:43:33 (341922): wrapper (7.7.26015): starting
19:43:33 (341922): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 19:43:33] Arguments: --nthreads 10
[2025-10-12 19:43:33] Threads: 10
[2025-10-12 19:43:33] Checking for CVMFS
[2025-10-12 19:43:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:43:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:43:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:43:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:43:35] 2.13.2.0 342865 27937 108824 151641 0 78 25565549 40960000 33292 16776704 0 208641304 99.774 117220484 46636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:43:35] CVMFS is ok
[2025-10-12 19:43:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:43:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:43:35] Further information can be found at the LHC@home message board.
[2025-10-12 19:43:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:43:35] Checking for apptainer binary...
[2025-10-12 19:43:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:43:35] Running /usr/bin/apptainer --version
[2025-10-12 19:43:35] apptainer version 1.4.3-1.el9
[2025-10-12 19:43:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:43:35] c-208-36.aglt2.org
[2025-10-12 19:43:35] apptainer works
[2025-10-12 19:43:35] Set ATHENA_PROC_NUMBER=10
[2025-10-12 19:43:35] Set ATHENA_CORE_NUMBER=10
[2025-10-12 19:43:35] Starting ATLAS job with PandaID=6840714472
[2025-10-12 19:43:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:00:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:00:18] 2025-10-13 00:59:24,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:26,261 | INFO     | job 6840714472 has state=finished
[2025-10-12 21:00:18] 2025-10-13 00:59:26,262 | INFO     | preparing for final server update for job 6840714472 in state='finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:26,262 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:00:18] 2025-10-13 00:59:26,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:00:18] 2025-10-13 00:59:26,262 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:00:18] 2025-10-13 00:59:26,262 | INFO     | job 6840714472 has finished - writing final server update
[2025-10-12 21:00:18] 2025-10-13 00:59:26,262 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:00:18] 2025-10-13 00:59:26,263 | INFO     | executing command: lscpu
[2025-10-12 21:00:18] 2025-10-13 00:59:26,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:00:18] 2025-10-13 00:59:26,768 | INFO     | time since job start (4484s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:27,426 | INFO     | monitor loop #306: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:27,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:28,774 | INFO     | time since job start (4486s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:29,939 | INFO     | monitor loop #307: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:29,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:30,783 | INFO     | time since job start (4488s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:32,460 | INFO     | monitor loop #308: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:32,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:32,790 | INFO     | time since job start (4490s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:34,774 | INFO     | PID=355621 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 21:00:18] 2025-10-13 00:59:34,774 | INFO     | .. there are 36 such processes running
[2025-10-12 21:00:18] 2025-10-13 00:59:34,968 | INFO     | monitor loop #309: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:34,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:35,774 | INFO     | time since job start (4493s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:36,246 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 21:00:18] 2025-10-13 00:59:37,473 | INFO     | monitor loop #310: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:37,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:37,781 | INFO     | time since job start (4495s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:39,789 | INFO     | time since job start (4497s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:39,978 | INFO     | monitor loop #311: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:39,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:41,799 | INFO     | time since job start (4499s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:42,483 | INFO     | monitor loop #312: job 0:6840714472 is in state 'finished'
[2025-10-12 21:00:18] 2025-10-13 00:59:42,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,787 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 21:00:18] 2025-10-13 00:59:43,792 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3782.1398359375025
[2025-10-12 21:00:18] 2025-10-13 00:59:43,805 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840714472/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,806 | INFO     | extracted standard info from prmon json
[2025-10-12 21:00:18] 2025-10-13 00:59:43,806 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:00:18] 2025-10-13 00:59:43,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:00:18] 2025-10-13 00:59:43,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:00:18] 2025-10-13 00:59:43,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | sum of square deviations: 85141859.53846154
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | sum of deviations: -2089303874.8461547
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | mean x: 1760315054.2307692
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | mean y: 2614027.7230769233
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | -- intersect: 43199146070.730194
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | intersect: 43199146070.730194
[2025-10-12 21:00:18] 2025-10-13 00:59:43,807 | INFO     | chi2: 0.030336497400322286
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | -- intersect: 43199146070.730194
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | current memory leak: -24.54 B/s (using 65 data points, chi2=0.03)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | could have reported an average CPU frequency of 3791 MHz (6 samples)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | ..............................
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . Timing measurements:
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . get job = 0 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . initial setup = 3 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . payload setup = 33 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . stage-in = 0 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . payload execution = 4381 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . stage-out = 1 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | . log creation = 0 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,808 | INFO     | ..............................
[2025-10-12 21:00:18] 2025-10-13 00:59:43,818 | INFO     | time since job start (4501s) is within the limit (172800.0s)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | 
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | job summary report
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | --------------------------------------------------
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | PanDA job id: 6840714472
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | task id: 46676269
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | errors: (none)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | pilot state: finished 
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | transexitcode: 0
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | exeerrorcode: 0
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | exeerrordiag: 
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | exitcode: 0
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | exitmsg: OK
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | cpuconsumptiontime: 24432 s
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | nevents: 400
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | neventsw: 0
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | pid: 367738
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | pgrp: 367738
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | corecount: 10
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | event service: False
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | sizes: {0: 2348857, 11: 2348857, 22: 2348885, 27: 2349175, 32: 2349203, 4419: 2375495, 4422: 2384521, 4423: 2384577, 4444: 2384771}
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | --------------------------------------------------
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | 
[2025-10-12 21:00:18] 2025-10-13 00:59:43,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 21:00:18] 2025-10-13 00:59:43,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | job 6840714472 has completed (purged errors)
[2025-10-12 21:00:18] 2025-10-13 00:59:43,934 | INFO     | overall cleanup function is called
[2025-10-12 21:00:18] 2025-10-13 00:59:44,941 | INFO     | --- collectZombieJob: --- 10, [367738]
[2025-10-12 21:00:18] 2025-10-13 00:59:44,942 | INFO     | zombie collector waiting for pid 367738
[2025-10-12 21:00:18] 2025-10-13 00:59:44,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:00:18] 2025-10-13 00:59:44,942 | INFO     | collected zombie processes
[2025-10-12 21:00:18] 2025-10-13 00:59:44,942 | INFO     | will attempt to kill all subprocesses of pid=367738
[2025-10-12 21:00:18] 2025-10-13 00:59:45,705 | INFO     | process IDs to be killed: [367738] (in reverse order)
[2025-10-12 21:00:18] 2025-10-13 00:59:45,892 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:00:18] 2025-10-13 00:59:45,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:00:18] 2025-10-13 00:59:45,915 | INFO     | did not find any defunct processes belonging to 367738
[2025-10-12 21:00:18] 2025-10-13 00:59:45,942 | INFO     | did not find any defunct processes belonging to 367738
[2025-10-12 21:00:18] 2025-10-13 00:59:45,942 | INFO     | ready for new job
[2025-10-12 21:00:18] 2025-10-13 00:59:45,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:00:18] 2025-10-13 00:59:45,946 | INFO     | ***************************************
[2025-10-12 21:00:18] 2025-10-13 00:59:45,946 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:00:18] 2025-10-13 00:59:45,946 | INFO     | ***************************************
[2025-10-12 21:00:18] 2025-10-13 00:59:45,946 | INFO     | 
[2025-10-12 21:00:18] 2025-10-13 00:59:45,951 | INFO     | architecture information:
[2025-10-12 21:00:18] 2025-10-13 00:59:45,951 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:00:18] 2025-10-13 00:59:45,973 | INFO     | cat /etc/os-release:
[2025-10-12 21:00:18] NAME="CentOS Linux"
[2025-10-12 21:00:18] VERSION="7 (Core)"
[2025-10-12 21:00:18] ID="centos"
[2025-10-12 21:00:18] ID_LIKE="rhel fedora"
[2025-10-12 21:00:18] VERSION_ID="7"
[2025-10-12 21:00:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:00:18] ANSI_COLOR="0;31"
[2025-10-12 21:00:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:00:18] HOME_URL="https://www.centos.org/"
[2025-10-12 21:00:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:00:18] 
[2025-10-12 21:00:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:00:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:00:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:00:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:00:18] 
[2025-10-12 21:00:18] 2025-10-13 00:59:45,974 | INFO     | ***************************************
[2025-10-12 21:00:18] 2025-10-13 00:59:46,476 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | INFO     | sufficient remaining disk space (169697345536 B)
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | INFO     | update_server=False
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:00:18] 2025-10-13 00:59:46,546 | INFO     | aborting loop
[2025-10-12 21:00:18] 2025-10-13 00:59:46,694 | INFO     | all data control threads have been joined
[2025-10-12 21:00:18] 2025-10-13 00:59:47,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:00:18] 2025-10-13 00:59:47,333 | INFO     | all payload control threads have been joined
[2025-10-12 21:00:18] 2025-10-13 00:59:47,451 | INFO     | all job control threads have been joined
[2025-10-12 21:00:18] 2025-10-13 00:59:47,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:00:18] 2025-10-13 00:59:47,551 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:47,552 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:47,622 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:47,700 | INFO     | [data] control thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:47,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,203 | INFO     | [job] validate thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,277 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,337 | INFO     | [payload] control thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,352 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,457 | INFO     | [job] control thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,557 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:48,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:00:18] 2025-10-13 00:59:49,053 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:49,106 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:49,139 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:49,613 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:00:18] 2025-10-13 00:59:49,936 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:51,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:00:18] 2025-10-13 00:59:53,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990438860608)>', '<ExcThread(monitor, started 139989962716928)>']
[2025-10-12 21:00:18] 2025-10-13 00:59:58,415 | INFO     | all workflow threads have been joined
[2025-10-12 21:00:18] 2025-10-13 00:59:58,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:00:18] 2025-10-13 00:59:58,415 | INFO     | traces error code: 0
[2025-10-12 21:00:18] 2025-10-13 00:59:58,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:00:18] 2025-10-13 01:00:17,489 | INFO     | PID=355621 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 21:00:18] 2025-10-13 01:00:17,489 | INFO     | .. there are 36 such processes running
[2025-10-12 21:00:18] 2025-10-13 01:00:17,490 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:00:18] 2025-10-13 01:00:17,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:00:18] 2025-10-13 01:00:17,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:00:18] 2025-10-13 01:00:17,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:00:18] 2025-10-13 01:00:17,490 | INFO     | [monitor] control thread has ended
[2025-10-12 21:00:18] 2025-10-13 01:00:17,733 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:00:18] 2025-10-13 01:00:17,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:00:18] 2025-10-13 01:00:17,769 [wrapper] pilotpid: 355621
[2025-10-12 21:00:18] 2025-10-13 01:00:17,772 [wrapper] Pilot exit status: 0
[2025-10-12 21:00:18] 2025-10-13 01:00:17,811 [wrapper] pandaids: 6840714472
[2025-10-12 21:00:18] 2025-10-13 01:00:17,933 [wrapper] cleanup supervisor_pilot  805821 355622
[2025-10-12 21:00:18] 2025-10-13 01:00:17,952 [wrapper] Test setup, not cleaning
[2025-10-12 21:00:18] 2025-10-13 01:00:17,996 [wrapper] apfmon messages muted
[2025-10-12 21:00:18] 2025-10-13 01:00:17,999 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:00:18] 2025-10-13 01:00:18,003 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:00:18]  *** Error codes and diagnostics ***
[2025-10-12 21:00:18]     "exeErrorCode": 0,
[2025-10-12 21:00:18]     "exeErrorDiag": "",
[2025-10-12 21:00:18]     "pilotErrorCode": 0,
[2025-10-12 21:00:18]     "pilotErrorDiag": "",
[2025-10-12 21:00:18]  *** Listing of results directory ***
[2025-10-12 21:00:18] total 414776
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:47 queuedata.json
[2025-10-12 21:00:18] -rwx------. 1 boincer umatlas     36292 Oct 12 15:48 runpilot2-wrapper.sh
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:00:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:43 run_atlas
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:43 job.xml
[2025-10-12 21:00:18] -rw-r--r--. 2 boincer umatlas 222064425 Oct 12 19:43 EVNT.46676267._004469.pool.root.1
[2025-10-12 21:00:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:43 start_atlas.sh
[2025-10-12 21:00:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:43 shared
[2025-10-12 21:00:18] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 19:43 input.tar.gz
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:43 boinc_lockfile
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:43 pandaJob.out
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas    975603 Oct 12 19:44 agis_schedconf.cvmfs.json
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:00:18] drwx------. 5 boincer umatlas      4096 Oct 12 19:44 pilot3
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 20:58 init_data.xml
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas 196803839 Oct 12 20:58 HITS.46676269._087868.pool.root.1
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas       529 Oct 12 20:58 boinc_task_state.xml
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas      1045 Oct 12 20:59 memory_monitor_summary.json
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas    354489 Oct 12 20:59 log.46676269._087868.job.log.tgz.1
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas      7806 Oct 12 20:59 heartbeat.json
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:00 boinc_mmap_file
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:00 wrapper_checkpoint.txt
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas       822 Oct 12 21:00 pilotlog.txt
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas        95 Oct 12 21:00 pilot_heartbeat.json
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas    626372 Oct 12 21:00 log.46676269._087868.job.log.1
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas       357 Oct 12 21:00 output.list
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:00 runtime_log
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas   1003520 Oct 12 21:00 result.tar.gz
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas       656 Oct 12 21:00 U6GODmsEHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6KlNDmT6Bmmn.diag
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 21:00 runtime_log.err
[2025-10-12 21:00:18] -rw-r--r--. 1 boincer umatlas     22291 Oct 12 21:00 stderr.txt
[2025-10-12 21:00:18] HITS file was successfully produced:
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas 196803839 Oct 12 20:58 shared/HITS.pool.root.1
[2025-10-12 21:00:18]  *** Contents of shared directory: ***
[2025-10-12 21:00:18] total 410616
[2025-10-12 21:00:18] -rw-r--r--. 2 boincer umatlas 222064425 Oct 12 19:43 ATLAS.root_0
[2025-10-12 21:00:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:43 start_atlas.sh
[2025-10-12 21:00:18] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 19:43 input.tar.gz
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas 196803839 Oct 12 20:58 HITS.pool.root.1
[2025-10-12 21:00:18] -rw-------. 1 boincer umatlas   1003520 Oct 12 21:00 result.tar.gz
21:00:20 (341922): run_atlas exited; CPU time 24568.979455
21:00:20 (341922): called boinc_finish(0)

</stderr_txt>
]]>

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