Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:41:37 (13828): wrapper (7.7.26015): starting
19:41:37 (13828): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:41:37] Arguments: --nthreads 8
[2025-10-12 19:41:37] Threads: 8
[2025-10-12 19:41:37] Checking for CVMFS
[2025-10-12 19:41:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:41:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:41:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:41:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:41:37] 2.11.2.0 3733 53573 124916 151641 0 56 14670682 18432001 1833 130560 0 48567627 99.976 2403993 39131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:41:37] CVMFS is ok
[2025-10-12 19:41:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:41:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:41:37] Further information can be found at the LHC@home message board.
[2025-10-12 19:41:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:41:37] Checking for apptainer binary...
[2025-10-12 19:41:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:41:37] Running /usr/bin/apptainer --version
[2025-10-12 19:41:37] apptainer version 1.3.2-1.el7
[2025-10-12 19:41:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:41:38] c-206-23.aglt2.org
[2025-10-12 19:41:38] apptainer works
[2025-10-12 19:41:38] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:41:38] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:41:38] Starting ATLAS job with PandaID=6840428746
[2025-10-12 19:41:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:43:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:43:12] 2025-10-13 02:42:16,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:43:12] 2025-10-13 02:42:17,722 | INFO     | time since job start (10829s) is within the limit (172800.0s)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,093 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:43:12] 2025-10-13 02:42:18,099 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2400.2916666666665
[2025-10-12 22:43:12] 2025-10-13 02:42:18,104 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840428746/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,105 | INFO     | extracted standard info from prmon json
[2025-10-12 22:43:12] 2025-10-13 02:42:18,105 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:43:12] 2025-10-13 02:42:18,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:43:12] 2025-10-13 02:42:18,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:43:12] 2025-10-13 02:42:18,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:43:12] 2025-10-13 02:42:18,111 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:43:12] 2025-10-13 02:42:18,112 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,113 | INFO     | sum of deviations: -5843765473.999996
[2025-10-12 22:43:12] 2025-10-13 02:42:18,113 | INFO     | mean x: 1760317901.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,114 | INFO     | mean y: 2505079.265536723
[2025-10-12 22:43:12] 2025-10-13 02:42:18,114 | INFO     | -- intersect: 5985236726.14608
[2025-10-12 22:43:12] 2025-10-13 02:42:18,114 | INFO     | intersect: 5985236726.14608
[2025-10-12 22:43:12] 2025-10-13 02:42:18,114 | INFO     | chi2: 1.5296678370549375
[2025-10-12 22:43:12] 2025-10-13 02:42:18,115 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,116 | INFO     | sum of deviations: -5487085419.999997
[2025-10-12 22:43:12] 2025-10-13 02:42:18,116 | INFO     | mean x: 1760317748.5
[2025-10-12 22:43:12] 2025-10-13 02:42:18,117 | INFO     | mean y: 2505463.406976744
[2025-10-12 22:43:12] 2025-10-13 02:42:18,117 | INFO     | -- intersect: 6124369846.613246
[2025-10-12 22:43:12] 2025-10-13 02:42:18,117 | INFO     | intersect: 6124369846.613246
[2025-10-12 22:43:12] 2025-10-13 02:42:18,117 | INFO     | chi2: 1.5293331241219772
[2025-10-12 22:43:12] 2025-10-13 02:42:18,118 | INFO     | current chi2=1.5293331241219772 (change=0.021881412738905506 %)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,118 | INFO     | right removable region: 171
[2025-10-12 22:43:12] 2025-10-13 02:42:18,118 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,120 | INFO     | sum of deviations: -30896711212.500008
[2025-10-12 22:43:12] 2025-10-13 02:42:18,120 | INFO     | mean x: 1760318053.5
[2025-10-12 22:43:12] 2025-10-13 02:42:18,120 | INFO     | mean y: 2531688.9941860465
[2025-10-12 22:43:12] 2025-10-13 02:42:18,120 | INFO     | -- intersect: 34473565803.52202
[2025-10-12 22:43:12] 2025-10-13 02:42:18,120 | INFO     | intersect: 34473565803.52202
[2025-10-12 22:43:12] 2025-10-13 02:42:18,121 | INFO     | chi2: 0.1604927533044879
[2025-10-12 22:43:12] 2025-10-13 02:42:18,121 | INFO     | current chi2=0.1604927533044879 (change=89.5079997489204 %)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,121 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,123 | INFO     | sum of deviations: -28162380447.999985
[2025-10-12 22:43:12] 2025-10-13 02:42:18,123 | INFO     | mean x: 1760318206.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,123 | INFO     | mean y: 2528523.7425149702
[2025-10-12 22:43:12] 2025-10-13 02:42:18,123 | INFO     | -- intersect: 34330510768.11219
[2025-10-12 22:43:12] 2025-10-13 02:42:18,124 | INFO     | intersect: 34330510768.11219
[2025-10-12 22:43:12] 2025-10-13 02:42:18,124 | INFO     | chi2: 0.15058833075528041
[2025-10-12 22:43:12] 2025-10-13 02:42:18,124 | INFO     | current chi2=0.15058833075528041 (change=6.171258418388989 %)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,124 | INFO     | left removable region: 20
[2025-10-12 22:43:12] 2025-10-13 02:42:18,125 | INFO     | sum of square deviations: 1067554900.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,126 | INFO     | sum of deviations: -16679059322.000002
[2025-10-12 22:43:12] 2025-10-13 02:42:18,126 | INFO     | mean x: 1760318328.0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,126 | INFO     | mean y: 2515888.821192053
[2025-10-12 22:43:12] 2025-10-13 02:42:18,126 | INFO     | -- intersect: 27505039476.428593
[2025-10-12 22:43:12] 2025-10-13 02:42:18,127 | INFO     | intersect: 27505039476.428593
[2025-10-12 22:43:12] 2025-10-13 02:42:18,127 | INFO     | chi2: 0.12247934725405372
[2025-10-12 22:43:12] 2025-10-13 02:42:18,127 | INFO     | -- intersect: 27505039476.428593
[2025-10-12 22:43:12] 2025-10-13 02:42:18,127 | INFO     | current memory leak: -15.62 B/s (using 151 data points, chi2=0.12)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,128 | INFO     | could have reported an average CPU frequency of 2538 MHz (9 samples)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,128 | INFO     | ..............................
[2025-10-12 22:43:12] 2025-10-13 02:42:18,128 | INFO     | . Timing measurements:
[2025-10-12 22:43:12] 2025-10-13 02:42:18,128 | INFO     | . get job = 0 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,129 | INFO     | . initial setup = 2 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,129 | INFO     | . payload setup = 4 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,129 | INFO     | . stage-in = 0 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,129 | INFO     | . payload execution = 10795 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,129 | INFO     | . stage-out = 2 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,129 | INFO     | . log creation = 0 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,130 | INFO     | ..............................
[2025-10-12 22:43:12] 2025-10-13 02:42:18,208 | INFO     | 
[2025-10-12 22:43:12] 2025-10-13 02:42:18,208 | INFO     | job summary report
[2025-10-12 22:43:12] 2025-10-13 02:42:18,208 | INFO     | --------------------------------------------------
[2025-10-12 22:43:12] 2025-10-13 02:42:18,208 | INFO     | PanDA job id: 6840428746
[2025-10-12 22:43:12] 2025-10-13 02:42:18,208 | INFO     | task id: 46676269
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | errors: (none)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | pilot state: finished 
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | transexitcode: 0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | exeerrorcode: 0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | exeerrordiag: 
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | exitcode: 0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | exitmsg: OK
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | cpuconsumptiontime: 81777 s
[2025-10-12 22:43:12] 2025-10-13 02:42:18,209 | INFO     | nevents: 400
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | neventsw: 0
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | pid: 24341
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | pgrp: 24341
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | corecount: 8
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | event service: False
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10804: 2378249, 10808: 2387247, 10809: 2387431, 10814: 2387689}
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | --------------------------------------------------
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | 
[2025-10-12 22:43:12] 2025-10-13 02:42:18,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 22:43:12] 2025-10-13 02:42:18,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:43:12] 2025-10-13 02:42:18,295 | INFO     | job 6840428746 has completed (purged errors)
[2025-10-12 22:43:12] 2025-10-13 02:42:18,296 | INFO     | overall cleanup function is called
[2025-10-12 22:43:12] 2025-10-13 02:42:19,303 | INFO     | --- collectZombieJob: --- 10, [24341]
[2025-10-12 22:43:12] 2025-10-13 02:42:19,304 | INFO     | zombie collector waiting for pid 24341
[2025-10-12 22:43:12] 2025-10-13 02:42:19,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:43:12] 2025-10-13 02:42:19,304 | INFO     | collected zombie processes
[2025-10-12 22:43:12] 2025-10-13 02:42:19,304 | INFO     | will attempt to kill all subprocesses of pid=24341
[2025-10-12 22:43:12] 2025-10-13 02:42:19,468 | INFO     | process IDs to be killed: [24341] (in reverse order)
[2025-10-12 22:43:12] 2025-10-13 02:42:19,510 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:43:12] 2025-10-13 02:42:19,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:43:12] 2025-10-13 02:42:19,513 | INFO     | did not find any defunct processes belonging to 24341
[2025-10-12 22:43:12] 2025-10-13 02:42:19,515 | INFO     | did not find any defunct processes belonging to 24341
[2025-10-12 22:43:12] 2025-10-13 02:42:19,515 | INFO     | ready for new job
[2025-10-12 22:43:12] 2025-10-13 02:42:19,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:43:12] 2025-10-13 02:42:19,517 | INFO     | ***************************************
[2025-10-12 22:43:12] 2025-10-13 02:42:19,517 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:43:12] 2025-10-13 02:42:19,517 | INFO     | ***************************************
[2025-10-12 22:43:12] 2025-10-13 02:42:19,517 | INFO     | 
[2025-10-12 22:43:12] 2025-10-13 02:42:19,518 | INFO     | architecture information:
[2025-10-12 22:43:12] 2025-10-13 02:42:19,518 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:43:12] 2025-10-13 02:42:19,528 | INFO     | cat /etc/os-release:
[2025-10-12 22:43:12] NAME="CentOS Linux"
[2025-10-12 22:43:12] VERSION="7 (Core)"
[2025-10-12 22:43:12] ID="centos"
[2025-10-12 22:43:12] ID_LIKE="rhel fedora"
[2025-10-12 22:43:12] VERSION_ID="7"
[2025-10-12 22:43:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:43:12] ANSI_COLOR="0;31"
[2025-10-12 22:43:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:43:12] HOME_URL="https://www.centos.org/"
[2025-10-12 22:43:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:43:12] 
[2025-10-12 22:43:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:43:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:43:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:43:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:43:12] 
[2025-10-12 22:43:12] 2025-10-13 02:42:19,528 | INFO     | ***************************************
[2025-10-12 22:43:12] 2025-10-13 02:42:20,032 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 22:43:12] 2025-10-13 02:42:20,047 | INFO     | sufficient remaining disk space (28100788224 B)
[2025-10-12 22:43:12] 2025-10-13 02:42:20,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:43:12] 2025-10-13 02:42:20,048 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:43:12] 2025-10-13 02:42:20,048 | INFO     | update_server=False
[2025-10-12 22:43:12] 2025-10-13 02:42:20,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:43:12] 2025-10-13 02:42:20,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:43:12] 2025-10-13 02:42:20,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:43:12] 2025-10-13 02:42:20,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:43:12] 2025-10-13 02:42:20,225 | INFO     | all data control threads have been joined
[2025-10-12 22:43:12] 2025-10-13 02:42:20,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:43:12] 2025-10-13 02:42:20,303 | INFO     | aborting loop
[2025-10-12 22:43:12] 2025-10-13 02:42:21,010 | INFO     | all payload control threads have been joined
[2025-10-12 22:43:12] 2025-10-13 02:42:21,049 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:21,053 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:21,124 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:21,131 | INFO     | all job control threads have been joined
[2025-10-12 22:43:12] 2025-10-13 02:42:21,231 | INFO     | [data] control thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:21,309 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:21,577 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,016 | INFO     | [payload] control thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,055 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,135 | INFO     | [job] control thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,174 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,208 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,255 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,256 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:22,551 | INFO     | [job] validate thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:24,056 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:30,843 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:43:12] 2025-10-13 02:42:31,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:43:12] 2025-10-13 02:42:50,977 | INFO     | PID=17497 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:43:12] 2025-10-13 02:42:50,977 | INFO     | .. there are 3 such processes running
[2025-10-12 22:43:12] 2025-10-13 02:42:50,978 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:43:12] 2025-10-13 02:42:50,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:43:12] 2025-10-13 02:42:50,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:43:12] 2025-10-13 02:43:05,457 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:43:12] 2025-10-13 02:43:06,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726967428928)>', '<ExcThread(monitor, started 139726149379840)>']
[2025-10-12 22:43:12] 2025-10-13 02:43:07,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:43:12] 2025-10-13 02:43:07,060 | INFO     | [monitor] control thread has ended
[2025-10-12 22:43:12] 2025-10-13 02:43:11,809 | INFO     | all workflow threads have been joined
[2025-10-12 22:43:12] 2025-10-13 02:43:11,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:43:12] 2025-10-13 02:43:11,810 | INFO     | traces error code: 0
[2025-10-12 22:43:12] 2025-10-13 02:43:11,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:43:12] 2025-10-13 02:43:11,935 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:43:12] 2025-10-13 02:43:11,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:43:12] 2025-10-13 02:43:11,940 [wrapper] pilotpid: 17497
[2025-10-12 22:43:12] 2025-10-13 02:43:11,943 [wrapper] Pilot exit status: 0
[2025-10-12 22:43:12] 2025-10-13 02:43:11,953 [wrapper] pandaids: 6840428746
[2025-10-12 22:43:12] 2025-10-13 02:43:11,995 [wrapper] cleanup supervisor_pilot  2936 17498
[2025-10-12 22:43:12] 2025-10-13 02:43:11,998 [wrapper] Test setup, not cleaning
[2025-10-12 22:43:12] 2025-10-13 02:43:12,001 [wrapper] apfmon messages muted
[2025-10-12 22:43:12] 2025-10-13 02:43:12,004 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:43:12] 2025-10-13 02:43:12,006 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:43:12]  *** Error codes and diagnostics ***
[2025-10-12 22:43:12]     "exeErrorCode": 0,
[2025-10-12 22:43:12]     "exeErrorDiag": "",
[2025-10-12 22:43:12]     "pilotErrorCode": 0,
[2025-10-12 22:43:12]     "pilotErrorDiag": "",
[2025-10-12 22:43:12]  *** Listing of results directory ***
[2025-10-12 22:43:12] total 416652
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:07 queuedata.json
[2025-10-12 22:43:12] -rwx------ 1 boincer umatlas     36292 Oct 12 13:09 runpilot2-wrapper.sh
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:43:12] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:41 run_atlas
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:41 job.xml
[2025-10-12 22:43:12] -rw-r--r-- 2 boincer umatlas 223630462 Oct 12 19:41 EVNT.46676267._004798.pool.root.1
[2025-10-12 22:43:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:41 start_atlas.sh
[2025-10-12 22:43:12] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:41 shared
[2025-10-12 22:43:12] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 19:41 input.tar.gz
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:41 boinc_lockfile
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:41 pandaJob.out
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas    975603 Oct 12 19:41 agis_schedconf.cvmfs.json
[2025-10-12 22:43:12] drwx------ 5 boincer umatlas      4096 Oct 12 19:41 pilot3
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 22:40 init_data.xml
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas 195243219 Oct 12 22:41 HITS.46676269._084330.pool.root.1
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas       530 Oct 12 22:41 boinc_task_state.xml
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas      1054 Oct 12 22:42 memory_monitor_summary.json
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas   1560580 Oct 12 22:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas    414410 Oct 12 22:42 log.46676269._084330.job.log.tgz.1
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas      7856 Oct 12 22:42 heartbeat.json
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas        95 Oct 12 22:42 pilot_heartbeat.json
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:43 boinc_mmap_file
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas        28 Oct 12 22:43 wrapper_checkpoint.txt
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas      4893 Oct 12 22:43 pilotlog.txt
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas   1520342 Oct 12 22:43 log.46676269._084330.job.log.1
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas       357 Oct 12 22:43 output.list
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:43 runtime_log
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas   1955840 Oct 12 22:43 result.tar.gz
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 22:43 runtime_log.err
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas       662 Oct 12 22:43 ocZNDmPkES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmInkNDmZYdftm.diag
[2025-10-12 22:43:12] -rw-r--r-- 1 boincer umatlas     21093 Oct 12 22:43 stderr.txt
[2025-10-12 22:43:12] HITS file was successfully produced:
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas 195243219 Oct 12 22:41 shared/HITS.pool.root.1
[2025-10-12 22:43:12]  *** Contents of shared directory: ***
[2025-10-12 22:43:12] total 411552
[2025-10-12 22:43:12] -rw-r--r-- 2 boincer umatlas 223630462 Oct 12 19:41 ATLAS.root_0
[2025-10-12 22:43:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:41 start_atlas.sh
[2025-10-12 22:43:12] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 19:41 input.tar.gz
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas 195243219 Oct 12 22:41 HITS.pool.root.1
[2025-10-12 22:43:12] -rw------- 1 boincer umatlas   1955840 Oct 12 22:43 result.tar.gz
22:43:13 (13828): run_atlas exited; CPU time 81915.046758
22:43:13 (13828): called boinc_finish(0)

</stderr_txt>
]]>

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