Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:18:01 (1729108): wrapper (7.7.26015): starting
20:18:01 (1729108): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 20:18:01] Arguments: --nthreads 9
[2025-10-12 20:18:01] Threads: 9
[2025-10-12 20:18:01] Checking for CVMFS
[2025-10-12 20:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:18:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:18:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:18:01] 2.13.2.0 5414 6387 159672 151641 1 687 22364953 40960001 13005 16776704 0 9945644 99.755 4493123 37034 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:18:01] CVMFS is ok
[2025-10-12 20:18:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:18:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:18:01] Further information can be found at the LHC@home message board.
[2025-10-12 20:18:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:18:01] Checking for apptainer binary...
[2025-10-12 20:18:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:18:01] Running /usr/bin/apptainer --version
[2025-10-12 20:18:01] apptainer version 1.4.3-1.el9
[2025-10-12 20:18:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:18:02] c-210-33-3.aglt2.org
[2025-10-12 20:18:02] apptainer works
[2025-10-12 20:18:02] Set ATHENA_PROC_NUMBER=9
[2025-10-12 20:18:02] Set ATHENA_CORE_NUMBER=9
[2025-10-12 20:18:02] Starting ATLAS job with PandaID=6840714600
[2025-10-12 20:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:32:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:32:46] 2025-10-13 02:32:06,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:32:46] 2025-10-13 02:32:06,802 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:32:46] 2025-10-13 02:32:06,802 | INFO     | sum of square deviations: 681274971.0769244
[2025-10-12 22:32:46] 2025-10-13 02:32:06,803 | INFO     | sum of deviations: -22078215378.692314
[2025-10-12 22:32:46] 2025-10-13 02:32:06,803 | INFO     | mean x: 1760318770.7692308
[2025-10-12 22:32:46] 2025-10-13 02:32:06,803 | INFO     | mean y: 2661482.376923077
[2025-10-12 22:32:46] 2025-10-13 02:32:06,803 | INFO     | -- intersect: 57049666885.735085
[2025-10-12 22:32:46] 2025-10-13 02:32:06,803 | INFO     | intersect: 57049666885.735085
[2025-10-12 22:32:46] 2025-10-13 02:32:06,804 | INFO     | chi2: 2.971539275886489
[2025-10-12 22:32:46] 2025-10-13 02:32:06,804 | INFO     | sum of square deviations: 605657936.7519985
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | sum of deviations: -11157901979.271992
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | mean x: 1760318618.272
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | mean y: 2682947.008
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | -- intersect: 32432642835.42132
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | intersect: 32432642835.42132
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | chi2: 2.204294799067299
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | current chi2=2.204294799067299 (change=25.819765636121396 %)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,805 | INFO     | sum of square deviations: 535815975.46666616
[2025-10-12 22:32:46] 2025-10-13 02:32:06,806 | INFO     | sum of deviations: -9268119060.6
[2025-10-12 22:32:46] 2025-10-13 02:32:06,806 | INFO     | mean x: 1760318465.7333333
[2025-10-12 22:32:46] 2025-10-13 02:32:06,806 | INFO     | mean y: 2687076.825
[2025-10-12 22:32:46] 2025-10-13 02:32:06,806 | INFO     | -- intersect: 30451277398.865936
[2025-10-12 22:32:46] 2025-10-13 02:32:06,806 | INFO     | intersect: 30451277398.865936
[2025-10-12 22:32:46] 2025-10-13 02:32:06,807 | INFO     | chi2: 2.2071472481224452
[2025-10-12 22:32:46] 2025-10-13 02:32:06,807 | INFO     | current chi2=2.2071472481224452 (change=-0.12940415485048595 %)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,807 | INFO     | right removable region: 119
[2025-10-12 22:32:46] 2025-10-13 02:32:06,807 | INFO     | sum of square deviations: 605644273.1999978
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | sum of deviations: -47768762337.15998
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | mean x: 1760318923.28
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | mean y: 2712582.976
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | -- intersect: 138843712167.56183
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | intersect: 138843712167.56183
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | chi2: 1.054744848399622
[2025-10-12 22:32:46] 2025-10-13 02:32:06,808 | INFO     | current chi2=1.054744848399622 (change=64.50510154926478 %)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,809 | INFO     | sum of square deviations: 535827637.79166526
[2025-10-12 22:32:46] 2025-10-13 02:32:06,809 | INFO     | sum of deviations: -47998952743.25
[2025-10-12 22:32:46] 2025-10-13 02:32:06,809 | INFO     | mean x: 1760319075.7916667
[2025-10-12 22:32:46] 2025-10-13 02:32:06,809 | INFO     | mean y: 2712949.35
[2025-10-12 22:32:46] 2025-10-13 02:32:06,809 | INFO     | -- intersect: 157690495685.21848
[2025-10-12 22:32:46] 2025-10-13 02:32:06,810 | INFO     | intersect: 157690495685.21848
[2025-10-12 22:32:46] 2025-10-13 02:32:06,810 | INFO     | chi2: 0.9961811824595519
[2025-10-12 22:32:46] 2025-10-13 02:32:06,810 | INFO     | current chi2=0.9961811824595519 (change=5.552401230395154 %)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,810 | INFO     | left removable region: 20
[2025-10-12 22:32:46] 2025-10-13 02:32:06,810 | INFO     | sum of square deviations: 300846291.63636416
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | sum of deviations: -26775240870.27273
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | mean x: 1760319045.2727273
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | mean y: 2725884.232323232
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | -- intersect: 156670658167.32617
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | intersect: 156670658167.32617
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | chi2: 0.15696022903419174
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | -- intersect: 156670658167.32617
[2025-10-12 22:32:46] 2025-10-13 02:32:06,811 | INFO     | current memory leak: -89.00 B/s (using 99 data points, chi2=0.16)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | could have reported an average CPU frequency of 2664 MHz (8 samples)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | ..............................
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | . Timing measurements:
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | . get job = 0 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | . initial setup = 2 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | . payload setup = 40 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,812 | INFO     | . stage-in = 0 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,813 | INFO     | . payload execution = 7909 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,813 | INFO     | . stage-out = 1 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,813 | INFO     | . log creation = 0 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,813 | INFO     | ..............................
[2025-10-12 22:32:46] 2025-10-13 02:32:06,913 | INFO     | 
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | job summary report
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | --------------------------------------------------
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | PanDA job id: 6840714600
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | task id: 46676269
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | errors: (none)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | pilot state: finished 
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | transexitcode: 0
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | exeerrorcode: 0
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | exeerrordiag: 
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | exitcode: 0
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | exitmsg: OK
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | cpuconsumptiontime: 42243 s
[2025-10-12 22:32:46] 2025-10-13 02:32:06,914 | INFO     | nevents: 400
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | neventsw: 0
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | pid: 1742351
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | pgrp: 1742351
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | corecount: 9
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | event service: False
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | sizes: {0: 2348856, 11: 2349146, 22: 2349146, 7954: 2376966, 7955: 2385964, 7956: 2386020, 7964: 2386342}
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | --------------------------------------------------
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | 
[2025-10-12 22:32:46] 2025-10-13 02:32:06,915 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | job 6840714600 has completed (purged errors)
[2025-10-12 22:32:46] 2025-10-13 02:32:06,939 | INFO     | overall cleanup function is called
[2025-10-12 22:32:46] 2025-10-13 02:32:07,948 | INFO     | --- collectZombieJob: --- 10, [1742351]
[2025-10-12 22:32:46] 2025-10-13 02:32:07,949 | INFO     | zombie collector waiting for pid 1742351
[2025-10-12 22:32:46] 2025-10-13 02:32:07,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:32:46] 2025-10-13 02:32:07,949 | INFO     | collected zombie processes
[2025-10-12 22:32:46] 2025-10-13 02:32:07,949 | INFO     | will attempt to kill all subprocesses of pid=1742351
[2025-10-12 22:32:46] 2025-10-13 02:32:08,237 | INFO     | process IDs to be killed: [1742351] (in reverse order)
[2025-10-12 22:32:46] 2025-10-13 02:32:08,355 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:32:46] 2025-10-13 02:32:08,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:32:46] 2025-10-13 02:32:08,364 | INFO     | did not find any defunct processes belonging to 1742351
[2025-10-12 22:32:46] 2025-10-13 02:32:08,372 | INFO     | did not find any defunct processes belonging to 1742351
[2025-10-12 22:32:46] 2025-10-13 02:32:08,372 | INFO     | ready for new job
[2025-10-12 22:32:46] 2025-10-13 02:32:08,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:32:46] 2025-10-13 02:32:08,374 | INFO     | ***************************************
[2025-10-12 22:32:46] 2025-10-13 02:32:08,374 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:32:46] 2025-10-13 02:32:08,374 | INFO     | ***************************************
[2025-10-12 22:32:46] 2025-10-13 02:32:08,374 | INFO     | 
[2025-10-12 22:32:46] 2025-10-13 02:32:08,378 | INFO     | architecture information:
[2025-10-12 22:32:46] 2025-10-13 02:32:08,378 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:32:46] 2025-10-13 02:32:08,397 | INFO     | cat /etc/os-release:
[2025-10-12 22:32:46] NAME="CentOS Linux"
[2025-10-12 22:32:46] VERSION="7 (Core)"
[2025-10-12 22:32:46] ID="centos"
[2025-10-12 22:32:46] ID_LIKE="rhel fedora"
[2025-10-12 22:32:46] VERSION_ID="7"
[2025-10-12 22:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:32:46] ANSI_COLOR="0;31"
[2025-10-12 22:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:32:46] HOME_URL="https://www.centos.org/"
[2025-10-12 22:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:32:46] 
[2025-10-12 22:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:32:46] 
[2025-10-12 22:32:46] 2025-10-13 02:32:08,397 | INFO     | ***************************************
[2025-10-12 22:32:46] 2025-10-13 02:32:08,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:32:46] 2025-10-13 02:32:08,974 | INFO     | sufficient remaining disk space (74173120512 B)
[2025-10-12 22:32:46] 2025-10-13 02:32:08,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:32:46] 2025-10-13 02:32:08,977 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:32:46] 2025-10-13 02:32:08,977 | INFO     | update_server=False
[2025-10-12 22:32:46] 2025-10-13 02:32:08,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:32:46] 2025-10-13 02:32:08,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:32:46] 2025-10-13 02:32:09,303 | INFO     | all data control threads have been joined
[2025-10-12 22:32:46] 2025-10-13 02:32:09,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:32:46] 2025-10-13 02:32:09,458 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:32:46] 2025-10-13 02:32:09,459 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:32:46] 2025-10-13 02:32:09,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:32:46] 2025-10-13 02:32:09,459 | INFO     | will abort loop
[2025-10-12 22:32:46] 2025-10-13 02:32:09,735 | INFO     | all payload control threads have been joined
[2025-10-12 22:32:46] 2025-10-13 02:32:09,984 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,310 | INFO     | [data] control thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,398 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,465 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,591 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,670 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,683 | INFO     | all job control threads have been joined
[2025-10-12 22:32:46] 2025-10-13 02:32:10,736 | INFO     | [job] validate thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,748 | INFO     | [payload] control thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,857 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:10,986 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:11,155 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:11,219 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:11,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:11,689 | INFO     | [job] control thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:11,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:32:46] 2025-10-13 02:32:12,932 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:13,351 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:32:46] 2025-10-13 02:32:39,122 | INFO     | PID=1733963 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:32:46] 2025-10-13 02:32:39,122 | INFO     | .. there are 10 such processes running
[2025-10-12 22:32:46] 2025-10-13 02:32:39,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:32:46] 2025-10-13 02:32:39,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:32:46] 2025-10-13 02:32:39,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:32:46] 2025-10-13 02:32:39,211 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:32:46] 2025-10-13 02:32:41,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367822772032)>', '<ExcThread(monitor, started 140367097747200)>']
[2025-10-12 22:32:46] 2025-10-13 02:32:41,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:32:46] 2025-10-13 02:32:41,136 | INFO     | [monitor] control thread has ended
[2025-10-12 22:32:46] 2025-10-13 02:32:46,076 | INFO     | all workflow threads have been joined
[2025-10-12 22:32:46] 2025-10-13 02:32:46,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:32:46] 2025-10-13 02:32:46,077 | INFO     | traces error code: 0
[2025-10-12 22:32:46] 2025-10-13 02:32:46,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:32:46] 2025-10-13 02:32:46,299 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:32:46] 2025-10-13 02:32:46,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:32:46] 2025-10-13 02:32:46,307 [wrapper] pilotpid: 1733963
[2025-10-12 22:32:46] 2025-10-13 02:32:46,311 [wrapper] Pilot exit status: 0
[2025-10-12 22:32:46] 2025-10-13 02:32:46,327 [wrapper] pandaids: 6840714600
[2025-10-12 22:32:46] 2025-10-13 02:32:46,418 [wrapper] cleanup supervisor_pilot 1935649 1733964
[2025-10-12 22:32:46] 2025-10-13 02:32:46,440 [wrapper] Test setup, not cleaning
[2025-10-12 22:32:46] 2025-10-13 02:32:46,498 [wrapper] apfmon messages muted
[2025-10-12 22:32:46] 2025-10-13 02:32:46,520 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:32:46] 2025-10-13 02:32:46,536 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:32:46]  *** Error codes and diagnostics ***
[2025-10-12 22:32:46]     "exeErrorCode": 0,
[2025-10-12 22:32:46]     "exeErrorDiag": "",
[2025-10-12 22:32:46]     "pilotErrorCode": 0,
[2025-10-12 22:32:46]     "pilotErrorDiag": "",
[2025-10-12 22:32:46]  *** Listing of results directory ***
[2025-10-12 22:32:46] total 414508
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:51 queuedata.json
[2025-10-12 22:32:46] -rwx------. 1 boincer umatlas     36292 Oct 12 15:52 runpilot2-wrapper.sh
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:32:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:18 run_atlas
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:18 job.xml
[2025-10-12 22:32:46] -rw-r--r--. 2 boincer umatlas 219405438 Oct 12 20:18 EVNT.46676267._004474.pool.root.1
[2025-10-12 22:32:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:18 start_atlas.sh
[2025-10-12 22:32:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:18 shared
[2025-10-12 22:32:46] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 20:18 input.tar.gz
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:18 boinc_lockfile
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 20:18 pandaJob.out
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas    975603 Oct 12 20:18 agis_schedconf.cvmfs.json
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:32:46] drwx------. 5 boincer umatlas      4096 Oct 12 20:18 pilot3
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 22:31 init_data.xml
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas       529 Oct 12 22:31 boinc_task_state.xml
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas 198119947 Oct 12 22:31 HITS.46676269._087996.pool.root.1
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas        95 Oct 12 22:31 pilot_heartbeat.json
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas      1042 Oct 12 22:31 memory_monitor_summary.json
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas    394338 Oct 12 22:31 log.46676269._087996.job.log.tgz.1
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas      7836 Oct 12 22:32 heartbeat.json
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:32 boinc_mmap_file
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas      5010 Oct 12 22:32 pilotlog.txt
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:32 wrapper_checkpoint.txt
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas   1118155 Oct 12 22:32 log.46676269._087996.job.log.1
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas       357 Oct 12 22:32 output.list
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:32 runtime_log
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas   1536000 Oct 12 22:32 result.tar.gz
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas      8713 Oct 12 22:32 runtime_log.err
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas       655 Oct 12 22:32 fU0LDm2HHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8LlNDm7zVJkn.diag
[2025-10-12 22:32:46] -rw-r--r--. 1 boincer umatlas     20954 Oct 12 22:32 stderr.txt
[2025-10-12 22:32:46] HITS file was successfully produced:
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas 198119947 Oct 12 22:31 shared/HITS.pool.root.1
[2025-10-12 22:32:46]  *** Contents of shared directory: ***
[2025-10-12 22:32:46] total 409824
[2025-10-12 22:32:46] -rw-r--r--. 2 boincer umatlas 219405438 Oct 12 20:18 ATLAS.root_0
[2025-10-12 22:32:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:18 start_atlas.sh
[2025-10-12 22:32:46] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 20:18 input.tar.gz
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas 198119947 Oct 12 22:31 HITS.pool.root.1
[2025-10-12 22:32:46] -rw-------. 1 boincer umatlas   1536000 Oct 12 22:32 result.tar.gz
22:32:48 (1729108): run_atlas exited; CPU time 42409.205221
22:32:48 (1729108): called boinc_finish(0)

</stderr_txt>
]]>

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