Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:49:15 (2616038): wrapper (7.7.26015): starting
17:49:15 (2616038): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 17:49:15] Arguments: --nthreads 12
[2025-10-13 17:49:15] Threads: 12
[2025-10-13 17:49:15] Checking for CVMFS
[2025-10-13 17:49:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:49:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:49:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:49:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:49:15] 2.13.1.0 2584362 13532 84404 151666 2 57 2913720 4097025 0 130560 0 24116976 99.996 466776 4155 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 17:49:15] CVMFS is ok
[2025-10-13 17:49:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:49:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:49:15] Further information can be found at the LHC@home message board.
[2025-10-13 17:49:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:49:15] Checking for apptainer binary...
[2025-10-13 17:49:15] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 17:49:15] apptainer is not installed, using version from CVMFS
[2025-10-13 17:49:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:49:16] pckelar1.cern.ch
[2025-10-13 17:49:16] apptainer works
[2025-10-13 17:49:16] Set ATHENA_PROC_NUMBER=12
[2025-10-13 17:49:16] Set ATHENA_CORE_NUMBER=12
[2025-10-13 17:49:16] Starting ATLAS job with PandaID=6840713448
[2025-10-13 17:49:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:33:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:33:32]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6840713448/log.46676269._087770.job.log.tgz.1
[2025-10-13 18:33:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/a8/log.46676269._087770.job.log.tgz.1
[2025-10-13 18:33:32]  workdir=None
[2025-10-13 18:33:32] ]
[2025-10-13 18:33:32] 2025-10-13 16:32:22,403 | INFO     | transferring file log.46676269._087770.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6840713448/log.46676269._087770.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 18:33:32] 2025-10-13 16:32:22,403 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6840713448/log.46676269._087770.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._087770.job
[2025-10-13 18:33:32] 2025-10-13 16:32:22,415 | INFO     | adding to output.list: log.46676269._087770.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/a8/log.46676269._087770.job.log.tg
[2025-10-13 18:33:32] 2025-10-13 16:32:22,416 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 18:33:32] 2025-10-13 16:32:22,416 | INFO     | summary of transferred files:
[2025-10-13 18:33:32] 2025-10-13 16:32:22,416 | INFO     |  -- lfn=log.46676269._087770.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 18:33:32] 2025-10-13 16:32:22,416 | INFO     | stage-out finished correctly
[2025-10-13 18:33:32] 2025-10-13 16:32:23,430 | INFO     | time since job start (2580s) is within the limit (172800.0s)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,154 | WARNING  | process 2627323 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 18:33:32] 2025-10-13 16:32:25,155 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840713448/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,217 | INFO     | number of running child processes to parent process 2627323: 1
[2025-10-13 18:33:32] 2025-10-13 16:32:25,217 | INFO     | maximum number of monitored processes: 6
[2025-10-13 18:33:32] 2025-10-13 16:32:25,355 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 18:33:32] 2025-10-13 16:32:25,398 | INFO     | job 6840713448 has state=finished
[2025-10-13 18:33:32] 2025-10-13 16:32:25,398 | INFO     | preparing for final server update for job 6840713448 in state='finished'
[2025-10-13 18:33:32] 2025-10-13 16:32:25,435 | INFO     | time since job start (2582s) is within the limit (172800.0s)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,841 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,841 | INFO     | this job has now completed (state=finished)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,841 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,842 | INFO     | log transfer has been attempted: DONE
[2025-10-13 18:33:32] 2025-10-13 16:32:25,842 | INFO     | job 6840713448 has finished - writing final server update
[2025-10-13 18:33:32] 2025-10-13 16:32:25,842 | INFO     | total number of processed events: 400 (read)
[2025-10-13 18:33:32] 2025-10-13 16:32:25,843 | INFO     | executing command: lscpu
[2025-10-13 18:33:32] 2025-10-13 16:32:25,864 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 18:33:32] 2025-10-13 16:32:27,441 | INFO     | time since job start (2584s) is within the limit (172800.0s)
[2025-10-13 18:33:32] 2025-10-13 16:32:27,719 | INFO     | monitor loop #200: job 0:6840713448 is in state 'finished'
[2025-10-13 18:33:32] 2025-10-13 16:32:27,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:33:32] 2025-10-13 16:32:29,446 | INFO     | time since job start (2586s) is within the limit (172800.0s)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,222 | INFO     | monitor loop #201: job 0:6840713448 is in state 'finished'
[2025-10-13 18:33:32] 2025-10-13 16:32:30,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,416 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 18:33:32] 2025-10-13 16:32:30,418 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2395.52145
[2025-10-13 18:33:32] 2025-10-13 16:32:30,420 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840713448/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,420 | INFO     | extracted standard info from prmon json
[2025-10-13 18:33:32] 2025-10-13 16:32:30,421 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 18:33:32] 2025-10-13 16:32:30,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 18:33:32] 2025-10-13 16:32:30,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:33:32] 2025-10-13 16:32:30,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | sum of square deviations: 13283970.0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | sum of deviations: -3577980437.0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | mean x: 1760371929.0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | mean y: 2992848.6
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | -- intersect: 474151633940.52905
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | intersect: 474151633940.52905
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | chi2: 0.049979624166945756
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | -- intersect: 474151633940.52905
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | current memory leak: -269.35 B/s (using 35 data points, chi2=0.05)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,422 | INFO     | could have reported an average CPU frequency of 2471 MHz (5 samples)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | ..............................
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . Timing measurements:
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . get job = 0 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . initial setup = 1 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . payload setup = 6 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . stage-in = 0 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . payload execution = 2553 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . stage-out = 0 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | . log creation = 0 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,423 | INFO     | ..............................
[2025-10-13 18:33:32] 2025-10-13 16:32:30,938 | INFO     | 
[2025-10-13 18:33:32] 2025-10-13 16:32:30,938 | INFO     | job summary report
[2025-10-13 18:33:32] 2025-10-13 16:32:30,938 | INFO     | --------------------------------------------------
[2025-10-13 18:33:32] 2025-10-13 16:32:30,938 | INFO     | PanDA job id: 6840713448
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | task id: 46676269
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | errors: (none)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | pilot state: finished 
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | transexitcode: 0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | exeerrorcode: 0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | exeerrordiag: 
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | exitcode: 0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | exitmsg: OK
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | cpuconsumptiontime: 27776 s
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | nevents: 400
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | neventsw: 0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | pid: 2627323
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | pgrp: 2627323
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | corecount: 12
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | event service: False
[2025-10-13 18:33:32] 2025-10-13 16:32:30,939 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 2563: 2374372, 2564: 2383370, 2567: 2383426, 2572: 2383780}
[2025-10-13 18:33:32] 2025-10-13 16:32:30,940 | INFO     | --------------------------------------------------
[2025-10-13 18:33:32] 2025-10-13 16:32:30,940 | INFO     | 
[2025-10-13 18:33:32] 2025-10-13 16:32:30,940 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 18:33:32] 2025-10-13 16:32:30,959 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:33:32] 2025-10-13 16:32:30,961 | INFO     | job 6840713448 has completed (purged errors)
[2025-10-13 18:33:32] 2025-10-13 16:32:30,961 | INFO     | overall cleanup function is called
[2025-10-13 18:33:32] 2025-10-13 16:32:31,968 | INFO     | --- collectZombieJob: --- 10, [2627323]
[2025-10-13 18:33:32] 2025-10-13 16:32:31,968 | INFO     | zombie collector waiting for pid 2627323
[2025-10-13 18:33:32] 2025-10-13 16:32:31,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:33:32] 2025-10-13 16:32:31,968 | INFO     | collected zombie processes
[2025-10-13 18:33:32] 2025-10-13 16:32:31,968 | INFO     | will attempt to kill all subprocesses of pid=2627323
[2025-10-13 18:33:32] 2025-10-13 16:32:32,045 | INFO     | process IDs to be killed: [2627323] (in reverse order)
[2025-10-13 18:33:32] 2025-10-13 16:32:32,076 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:33:32] 2025-10-13 16:32:32,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:33:32] 2025-10-13 16:32:32,078 | INFO     | did not find any defunct processes belonging to 2627323
[2025-10-13 18:33:32] 2025-10-13 16:32:32,079 | INFO     | did not find any defunct processes belonging to 2627323
[2025-10-13 18:33:32] 2025-10-13 16:32:32,079 | INFO     | ready for new job
[2025-10-13 18:33:32] 2025-10-13 16:32:32,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:33:32] 2025-10-13 16:32:32,080 | INFO     | ***************************************
[2025-10-13 18:33:32] 2025-10-13 16:32:32,080 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:33:32] 2025-10-13 16:32:32,080 | INFO     | ***************************************
[2025-10-13 18:33:32] 2025-10-13 16:32:32,081 | INFO     | 
[2025-10-13 18:33:32] 2025-10-13 16:32:32,081 | INFO     | architecture information:
[2025-10-13 18:33:32] 2025-10-13 16:32:32,082 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:33:32] 2025-10-13 16:32:32,090 | INFO     | cat /etc/os-release:
[2025-10-13 18:33:32] NAME="CentOS Linux"
[2025-10-13 18:33:32] VERSION="7 (Core)"
[2025-10-13 18:33:32] ID="centos"
[2025-10-13 18:33:32] ID_LIKE="rhel fedora"
[2025-10-13 18:33:32] VERSION_ID="7"
[2025-10-13 18:33:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:33:32] ANSI_COLOR="0;31"
[2025-10-13 18:33:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:33:32] HOME_URL="https://www.centos.org/"
[2025-10-13 18:33:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:33:32] 
[2025-10-13 18:33:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:33:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:33:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:33:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:33:32] 
[2025-10-13 18:33:32] 2025-10-13 16:32:32,090 | INFO     | ***************************************
[2025-10-13 18:33:32] 2025-10-13 16:32:32,593 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 18:33:32] 2025-10-13 16:32:32,604 | INFO     | sufficient remaining disk space (826974142464 B)
[2025-10-13 18:33:32] 2025-10-13 16:32:32,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:33:32] 2025-10-13 16:32:32,605 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:33:32] 2025-10-13 16:32:32,605 | INFO     | update_server=False
[2025-10-13 18:33:32] 2025-10-13 16:32:32,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:33:32] 2025-10-13 16:32:32,609 | INFO     | all data control threads have been joined
[2025-10-13 18:33:32] 2025-10-13 16:32:32,725 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 18:33:32] 2025-10-13 16:32:32,725 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 18:33:32] 2025-10-13 16:32:32,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:33:32] 2025-10-13 16:32:32,725 | INFO     | will abort loop
[2025-10-13 18:33:32] 2025-10-13 16:32:32,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:33:32] 2025-10-13 16:32:33,611 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:33,614 | INFO     | [data] control thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:33,730 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:33,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:33,843 | INFO     | all payload control threads have been joined
[2025-10-13 18:33:32] 2025-10-13 16:32:33,946 | INFO     | all job control threads have been joined
[2025-10-13 18:33:32] 2025-10-13 16:32:34,128 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,150 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,685 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,813 | INFO     | [job] validate thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,848 | INFO     | [payload] control thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,951 | INFO     | [job] control thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,974 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:34,988 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:35,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:35,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:33:32] 2025-10-13 16:32:35,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:33:32] 2025-10-13 16:32:36,487 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:39,912 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:32:42,671 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:33:32] 2025-10-13 16:32:43,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:33:32] 2025-10-13 16:33:02,637 | INFO     | PID=2619870 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:33:32] 2025-10-13 16:33:02,637 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:33:32] 2025-10-13 16:33:02,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:33:32] 2025-10-13 16:33:02,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:33:32] 2025-10-13 16:33:26,480 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:33:32] 2025-10-13 16:33:26,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718181181248)>', '<ExcThread(monitor, started 139717332940544)>']
[2025-10-13 18:33:32] 2025-10-13 16:33:27,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:33:32] 2025-10-13 16:33:27,762 | INFO     | [monitor] control thread has ended
[2025-10-13 18:33:32] 2025-10-13 16:33:32,008 | INFO     | all workflow threads have been joined
[2025-10-13 18:33:32] 2025-10-13 16:33:32,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:33:32] 2025-10-13 16:33:32,009 | INFO     | traces error code: 0
[2025-10-13 18:33:32] 2025-10-13 16:33:32,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:33:32] 2025-10-13 16:33:32,083 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:33:32] 2025-10-13 16:33:32,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:33:32] 2025-10-13 16:33:32,088 [wrapper] pilotpid: 2619870
[2025-10-13 18:33:32] 2025-10-13 16:33:32,091 [wrapper] Pilot exit status: 0
[2025-10-13 18:33:32] 2025-10-13 16:33:32,099 [wrapper] pandaids: 6840713448
[2025-10-13 18:33:32] 2025-10-13 16:33:32,124 [wrapper] cleanup supervisor_pilot 2636612 2619871
[2025-10-13 18:33:32] 2025-10-13 16:33:32,126 [wrapper] Test setup, not cleaning
[2025-10-13 18:33:32] 2025-10-13 16:33:32,128 [wrapper] apfmon messages muted
[2025-10-13 18:33:32] 2025-10-13 16:33:32,130 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:33:32] 2025-10-13 16:33:32,132 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:33:32]  *** Error codes and diagnostics ***
[2025-10-13 18:33:32]     "exeErrorCode": 0,
[2025-10-13 18:33:32]     "exeErrorDiag": "",
[2025-10-13 18:33:32]     "pilotErrorCode": 0,
[2025-10-13 18:33:32]     "pilotErrorDiag": "",
[2025-10-13 18:33:32]  *** Listing of results directory ***
[2025-10-13 18:33:32] total 415788
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:45 queuedata.json
[2025-10-13 18:33:32] -rwx------ 1 boinc boinc     36292 Oct 12 21:45 runpilot2-wrapper.sh
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc       100 Oct 13 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:33:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 17:49 run_atlas
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc       105 Oct 13 17:49 job.xml
[2025-10-13 18:33:32] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:49 input.tar.gz
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc      6532 Oct 13 17:49 init_data.xml
[2025-10-13 18:33:32] -rw-r--r-- 2 boinc boinc 224317575 Oct 13 17:49 EVNT.46676267._004465.pool.root.1
[2025-10-13 18:33:32] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:49 start_atlas.sh
[2025-10-13 18:33:32] drwxrwx--x 2 boinc boinc        68 Oct 13 17:49 shared
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc         0 Oct 13 17:49 boinc_lockfile
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc      2550 Oct 13 17:49 pandaJob.out
[2025-10-13 18:33:32] -rw------- 1 boinc boinc    972783 Oct 13 17:49 agis_schedconf.cvmfs.json
[2025-10-13 18:33:32] -rw------- 1 boinc boinc   1560580 Oct 13 17:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:33:32] drwx------ 5 boinc boinc      4096 Oct 13 17:49 pilot3
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:31 boinc_task_state.xml
[2025-10-13 18:33:32] -rw------- 1 boinc boinc 196042283 Oct 13 18:31 HITS.46676269._087770.pool.root.1
[2025-10-13 18:33:32] -rw------- 1 boinc boinc      1020 Oct 13 18:32 memory_monitor_summary.json
[2025-10-13 18:33:32] -rw------- 1 boinc boinc    357874 Oct 13 18:32 log.46676269._087770.job.log.tgz.1
[2025-10-13 18:33:32] -rw------- 1 boinc boinc      7802 Oct 13 18:32 heartbeat.json
[2025-10-13 18:33:32] -rw------- 1 boinc boinc        95 Oct 13 18:33 pilot_heartbeat.json
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:33 wrapper_checkpoint.txt
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:33 boinc_mmap_file
[2025-10-13 18:33:32] -rw------- 1 boinc boinc      5007 Oct 13 18:33 pilotlog.txt
[2025-10-13 18:33:32] -rw------- 1 boinc boinc    401961 Oct 13 18:33 log.46676269._087770.job.log.1
[2025-10-13 18:33:32] -rw------- 1 boinc boinc       357 Oct 13 18:33 output.list
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:33 runtime_log
[2025-10-13 18:33:32] -rw------- 1 boinc boinc    778240 Oct 13 18:33 result.tar.gz
[2025-10-13 18:33:32] -rw------- 1 boinc boinc       653 Oct 13 18:33 YtFNDmmBHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCrUMDmpFPwPn.diag
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc      8727 Oct 13 18:33 runtime_log.err
[2025-10-13 18:33:32] -rw-r--r-- 1 boinc boinc     22352 Oct 13 18:33 stderr.txt
[2025-10-13 18:33:32] HITS file was successfully produced:
[2025-10-13 18:33:32] -rw------- 1 boinc boinc 196042283 Oct 13 18:31 shared/HITS.pool.root.1
[2025-10-13 18:33:32]  *** Contents of shared directory: ***
[2025-10-13 18:33:32] total 411848
[2025-10-13 18:33:32] -rw-r--r-- 2 boinc boinc    569683 Oct 13 17:49 input.tar.gz
[2025-10-13 18:33:32] -rw-r--r-- 2 boinc boinc 224317575 Oct 13 17:49 ATLAS.root_0
[2025-10-13 18:33:32] -rw-r--r-- 2 boinc boinc     15120 Oct 13 17:49 start_atlas.sh
[2025-10-13 18:33:32] -rw------- 1 boinc boinc 196042283 Oct 13 18:31 HITS.pool.root.1
[2025-10-13 18:33:32] -rw------- 1 boinc boinc    778240 Oct 13 18:33 result.tar.gz
18:33:33 (2616038): run_atlas exited; CPU time 27786.267788
18:33:33 (2616038): called boinc_finish(0)

</stderr_txt>
]]>

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