Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:11 (3927134): wrapper (7.7.26015): starting
11:19:11 (3927134): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 11:19:11] Arguments: --nthreads 4
[2025-10-13 11:19:11] Threads: 4
[2025-10-13 11:19:11] Checking for CVMFS
[2025-10-13 11:19:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:19:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:19:12] 2.9.2.0 1950177 5636 95684 151656 2 57 30338520 36864001 0 130560 0 5171664 99.992 191086 755 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:19:12] CVMFS is ok
[2025-10-13 11:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:19:12] Further information can be found at the LHC@home message board.
[2025-10-13 11:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:19:12] Checking for apptainer binary...
[2025-10-13 11:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:19:12] Running /usr/bin/apptainer --version
[2025-10-13 11:19:12] apptainer version 1.4.1-1.1
[2025-10-13 11:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:19:12] thA314a
[2025-10-13 11:19:12] apptainer works
[2025-10-13 11:19:12] Set ATHENA_PROC_NUMBER=4
[2025-10-13 11:19:12] Set ATHENA_CORE_NUMBER=4
[2025-10-13 11:19:12] Starting ATLAS job with PandaID=6840713436
[2025-10-13 11:19:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:30:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:30:32] 2025-10-13 10:29:30,556 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:30,557 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:30,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:30:32] 2025-10-13 10:29:30,629 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:30,631 | INFO     | [data] control thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:30,765 | INFO     | all payload control threads have been joined
[2025-10-13 12:30:32] 2025-10-13 10:29:30,860 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:30,887 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:30,928 | INFO     | [job] control thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:31,016 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:31,341 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:31,459 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:31,771 | INFO     | [payload] control thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:31,945 | INFO     | [job] validate thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:32,028 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:32,043 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:34,564 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:29:40,563 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:30:32] 2025-10-13 10:29:41,569 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:30:32] 2025-10-13 10:30:00,615 | INFO     | PID=3930909 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:30:32] 2025-10-13 10:30:00,616 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:30:32] 2025-10-13 10:30:00,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:30:32] 2025-10-13 10:30:00,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:30:32] 2025-10-13 10:30:25,739 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:30:32] 2025-10-13 10:30:26,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673469085504)>', '<ExcThread(monitor, started 140672359184128)>']
[2025-10-13 12:30:32] 2025-10-13 10:30:27,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:30:32] 2025-10-13 10:30:27,760 | INFO     | [monitor] control thread has ended
[2025-10-13 12:30:32] 2025-10-13 10:30:31,870 | INFO     | all workflow threads have been joined
[2025-10-13 12:30:32] 2025-10-13 10:30:31,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:30:32] 2025-10-13 10:30:31,871 | INFO     | traces error code: 0
[2025-10-13 12:30:32] 2025-10-13 10:30:31,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:30:32] 2025-10-13 10:30:31,939 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:30:32] 2025-10-13 10:30:31,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:30:32] 2025-10-13 10:30:31,946 [wrapper] pilotpid: 3930909
[2025-10-13 12:30:32] 2025-10-13 10:30:31,950 [wrapper] Pilot exit status: 0
[2025-10-13 12:30:32] 2025-10-13 10:30:31,961 [wrapper] pandaids: 6840713436
[2025-10-13 12:30:32] 2025-10-13 10:30:31,983 [wrapper] cleanup supervisor_pilot 3947662 3930910
[2025-10-13 12:30:32] 2025-10-13 10:30:31,987 [wrapper] Test setup, not cleaning
[2025-10-13 12:30:32] 2025-10-13 10:30:31,990 [wrapper] apfmon messages muted
[2025-10-13 12:30:32] 2025-10-13 10:30:31,994 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:30:32] 2025-10-13 10:30:31,998 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:30:32]  *** Error codes and diagnostics ***
[2025-10-13 12:30:32]     "exeErrorCode": 0,
[2025-10-13 12:30:32]     "exeErrorDiag": "",
[2025-10-13 12:30:32]     "pilotErrorCode": 0,
[2025-10-13 12:30:32]     "pilotErrorDiag": "",
[2025-10-13 12:30:32]  *** Listing of results directory ***
[2025-10-13 12:30:32] total 415880
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:43 queuedata.json
[2025-10-13 12:30:32] -rwx------ 1 boinc boinc     36292 Oct 12 21:44 runpilot2-wrapper.sh
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:30:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:19 run_atlas
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:19 job.xml
[2025-10-13 12:30:32] -rw-r--r-- 2 boinc boinc 224317575 Oct 13 11:19 EVNT.46676267._004465.pool.root.1
[2025-10-13 12:30:32] -rw-r--r-- 2 boinc boinc    569683 Oct 13 11:19 input.tar.gz
[2025-10-13 12:30:32] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:19 start_atlas.sh
[2025-10-13 12:30:32] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:19 shared
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:19 boinc_setup_complete
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc      6371 Oct 13 11:19 init_data.xml
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:19 boinc_lockfile
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc      2549 Oct 13 11:19 pandaJob.out
[2025-10-13 12:30:32] -rw------- 1 boinc boinc    972849 Oct 13 11:19 agis_schedconf.cvmfs.json
[2025-10-13 12:30:32] -rw------- 1 boinc boinc   1560580 Oct 13 11:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:30:32] drwx------ 5 boinc boinc      4096 Oct 13 11:19 pilot3
[2025-10-13 12:30:32] -rw------- 1 boinc boinc 195908866 Oct 13 12:29 HITS.46676269._087758.pool.root.1
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:29 boinc_task_state.xml
[2025-10-13 12:30:32] -rw------- 1 boinc boinc      1022 Oct 13 12:29 memory_monitor_summary.json
[2025-10-13 12:30:32] -rw------- 1 boinc boinc    246244 Oct 13 12:29 log.46676269._087758.job.log.tgz.1
[2025-10-13 12:30:32] -rw------- 1 boinc boinc      7765 Oct 13 12:29 heartbeat.json
[2025-10-13 12:30:32] -rw------- 1 boinc boinc        95 Oct 13 12:30 pilot_heartbeat.json
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:30 boinc_mmap_file
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:30 wrapper_checkpoint.txt
[2025-10-13 12:30:32] -rw------- 1 boinc boinc      4824 Oct 13 12:30 pilotlog.txt
[2025-10-13 12:30:32] -rw------- 1 boinc boinc    626537 Oct 13 12:30 log.46676269._087758.job.log.1
[2025-10-13 12:30:32] -rw------- 1 boinc boinc       357 Oct 13 12:30 output.list
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:30 runtime_log
[2025-10-13 12:30:32] -rw------- 1 boinc boinc    890880 Oct 13 12:30 result.tar.gz
[2025-10-13 12:30:32] -rw------- 1 boinc boinc       659 Oct 13 12:30 xKrKDmBBHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9JlNDmGrzmtn.diag
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc      8782 Oct 13 12:30 runtime_log.err
[2025-10-13 12:30:32] -rw-r--r-- 1 boinc boinc      6630 Oct 13 12:30 stderr.txt
[2025-10-13 12:30:32] HITS file was successfully produced:
[2025-10-13 12:30:32] -rw------- 1 boinc boinc 195908866 Oct 13 12:29 shared/HITS.pool.root.1
[2025-10-13 12:30:32]  *** Contents of shared directory: ***
[2025-10-13 12:30:32] total 411840
[2025-10-13 12:30:32] -rw-r--r-- 2 boinc boinc 224317575 Oct 13 11:19 ATLAS.root_0
[2025-10-13 12:30:32] -rw-r--r-- 2 boinc boinc    569683 Oct 13 11:19 input.tar.gz
[2025-10-13 12:30:32] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:19 start_atlas.sh
[2025-10-13 12:30:32] -rw------- 1 boinc boinc 195908866 Oct 13 12:29 HITS.pool.root.1
[2025-10-13 12:30:32] -rw------- 1 boinc boinc    890880 Oct 13 12:30 result.tar.gz
12:30:33 (3927134): run_atlas exited; CPU time 15811.621221
12:30:33 (3927134): called boinc_finish(0)

</stderr_txt>
]]>

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