Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:16 (15535): wrapper (7.7.26015): starting
19:48:16 (15535): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:48:16] Arguments: --nthreads 8
[2025-10-12 19:48:16] Threads: 8
[2025-10-12 19:48:16] Checking for CVMFS
[2025-10-12 19:48:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:48:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:48:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:48:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:48:17] 2.11.2.0 13817 481239 275184 151641 1 57 9916048 18432001 2749 130560 8 210134971 99.520 263805694 24851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 19:48:17] CVMFS is ok
[2025-10-12 19:48:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:48:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:48:17] Further information can be found at the LHC@home message board.
[2025-10-12 19:48:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:48:17] Checking for apptainer binary...
[2025-10-12 19:48:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:48:17] Running /usr/bin/apptainer --version
[2025-10-12 19:48:17] apptainer version 1.3.2-1.el7
[2025-10-12 19:48:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:48:18] c-9-29.aglt2.org
[2025-10-12 19:48:18] apptainer works
[2025-10-12 19:48:18] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:48:18] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:48:18] Starting ATLAS job with PandaID=6840429702
[2025-10-12 19:48:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:28:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:28:49] 2025-10-13 02:28:10,180 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:28:49] 2025-10-13 02:28:10,184 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9119375000014
[2025-10-12 22:28:49] 2025-10-13 02:28:10,187 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840429702/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,188 | INFO     | extracted standard info from prmon json
[2025-10-12 22:28:49] 2025-10-13 02:28:10,188 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:28:49] 2025-10-13 02:28:10,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:28:49] 2025-10-13 02:28:10,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:28:49] 2025-10-13 02:28:10,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:28:49] 2025-10-13 02:28:10,190 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:28:49] 2025-10-13 02:28:10,191 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,191 | INFO     | sum of deviations: 3429153368.9999967
[2025-10-12 22:28:49] 2025-10-13 02:28:10,191 | INFO     | mean x: 1760317691.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,191 | INFO     | mean y: 2497702.203821656
[2025-10-12 22:28:49] 2025-10-13 02:28:10,191 | INFO     | -- intersect: -5028083936.121312
[2025-10-12 22:28:49] 2025-10-13 02:28:10,192 | INFO     | intersect: -5028083936.121312
[2025-10-12 22:28:49] 2025-10-13 02:28:10,192 | INFO     | chi2: 1.4272933748700376
[2025-10-12 22:28:49] 2025-10-13 02:28:10,192 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | sum of deviations: 3405830537.500002
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | mean x: 1760317538.5
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | mean y: 2497670.1513157897
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | -- intersect: -5503343274.183473
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | intersect: -5503343274.183473
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | chi2: 1.4280706390879543
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | current chi2=1.4280706390879543 (change=-0.05445721472556112 %)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,193 | INFO     | right removable region: 151
[2025-10-12 22:28:49] 2025-10-13 02:28:10,194 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,194 | INFO     | sum of deviations: -17681799861.5
[2025-10-12 22:28:49] 2025-10-13 02:28:10,194 | INFO     | mean x: 1760317843.5
[2025-10-12 22:28:49] 2025-10-13 02:28:10,194 | INFO     | mean y: 2526229.111842105
[2025-10-12 22:28:49] 2025-10-13 02:28:10,195 | INFO     | -- intersect: 28586800591.23569
[2025-10-12 22:28:49] 2025-10-13 02:28:10,195 | INFO     | intersect: 28586800591.23569
[2025-10-12 22:28:49] 2025-10-13 02:28:10,195 | INFO     | chi2: 0.10810949010620112
[2025-10-12 22:28:49] 2025-10-13 02:28:10,195 | INFO     | current chi2=0.10810949010620112 (change=92.4255593131969 %)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,195 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | sum of deviations: -14960590563.000002
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | mean x: 1760317996.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | mean y: 2522177.3673469387
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | -- intersect: 26740560192.25643
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | intersect: 26740560192.25643
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | chi2: 0.09598398081819164
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | current chi2=0.09598398081819164 (change=11.215952712475117 %)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,196 | INFO     | left removable region: 20
[2025-10-12 22:28:49] 2025-10-13 02:28:10,197 | INFO     | sum of square deviations: 697054930.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,197 | INFO     | sum of deviations: -4354633047.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,197 | INFO     | mean x: 1760318118.0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,197 | INFO     | mean y: 2505429.603053435
[2025-10-12 22:28:49] 2025-10-13 02:28:10,197 | INFO     | -- intersect: 10999543281.23355
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | intersect: 10999543281.23355
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | chi2: 0.038425169151111174
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | -- intersect: 10999543281.23355
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | current memory leak: -6.25 B/s (using 131 data points, chi2=0.04)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | ..............................
[2025-10-12 22:28:49] 2025-10-13 02:28:10,198 | INFO     | . Timing measurements:
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . get job = 0 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . initial setup = 2 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . payload setup = 4 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . stage-in = 0 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . payload execution = 9552 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . stage-out = 0 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | . log creation = 0 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,199 | INFO     | ..............................
[2025-10-12 22:28:49] 2025-10-13 02:28:10,307 | INFO     | 
[2025-10-12 22:28:49] 2025-10-13 02:28:10,307 | INFO     | job summary report
[2025-10-12 22:28:49] 2025-10-13 02:28:10,308 | INFO     | --------------------------------------------------
[2025-10-12 22:28:49] 2025-10-13 02:28:10,308 | INFO     | PanDA job id: 6840429702
[2025-10-12 22:28:49] 2025-10-13 02:28:10,308 | INFO     | task id: 46676269
[2025-10-12 22:28:49] 2025-10-13 02:28:10,308 | INFO     | errors: (none)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:28:49] 2025-10-13 02:28:10,308 | INFO     | pilot state: finished 
[2025-10-12 22:28:49] 2025-10-13 02:28:10,309 | INFO     | transexitcode: 0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,309 | INFO     | exeerrorcode: 0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,309 | INFO     | exeerrordiag: 
[2025-10-12 22:28:49] 2025-10-13 02:28:10,309 | INFO     | exitcode: 0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,309 | INFO     | exitmsg: OK
[2025-10-12 22:28:49] 2025-10-13 02:28:10,309 | INFO     | cpuconsumptiontime: 71971 s
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | nevents: 400
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | neventsw: 0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | pid: 26995
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | pgrp: 26995
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | corecount: 8
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | event service: False
[2025-10-12 22:28:49] 2025-10-13 02:28:10,310 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 9561: 2377627, 9562: 2386625, 9563: 2386681, 9567: 2387067}
[2025-10-12 22:28:49] 2025-10-13 02:28:10,311 | INFO     | --------------------------------------------------
[2025-10-12 22:28:49] 2025-10-13 02:28:10,311 | INFO     | 
[2025-10-12 22:28:49] 2025-10-13 02:28:10,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:28:49] 2025-10-13 02:28:10,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:28:49] 2025-10-13 02:28:10,333 | INFO     | job 6840429702 has completed (purged errors)
[2025-10-12 22:28:49] 2025-10-13 02:28:10,333 | INFO     | overall cleanup function is called
[2025-10-12 22:28:49] 2025-10-13 02:28:11,341 | INFO     | --- collectZombieJob: --- 10, [26995]
[2025-10-12 22:28:49] 2025-10-13 02:28:11,341 | INFO     | zombie collector waiting for pid 26995
[2025-10-12 22:28:49] 2025-10-13 02:28:11,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:28:49] 2025-10-13 02:28:11,342 | INFO     | collected zombie processes
[2025-10-12 22:28:49] 2025-10-13 02:28:11,342 | INFO     | will attempt to kill all subprocesses of pid=26995
[2025-10-12 22:28:49] 2025-10-13 02:28:11,573 | INFO     | process IDs to be killed: [26995] (in reverse order)
[2025-10-12 22:28:49] 2025-10-13 02:28:11,643 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:28:49] 2025-10-13 02:28:11,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:28:49] 2025-10-13 02:28:11,653 | INFO     | did not find any defunct processes belonging to 26995
[2025-10-12 22:28:49] 2025-10-13 02:28:11,660 | INFO     | did not find any defunct processes belonging to 26995
[2025-10-12 22:28:49] 2025-10-13 02:28:11,661 | INFO     | ready for new job
[2025-10-12 22:28:49] 2025-10-13 02:28:11,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:28:49] 2025-10-13 02:28:11,663 | INFO     | ***************************************
[2025-10-12 22:28:49] 2025-10-13 02:28:11,663 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:28:49] 2025-10-13 02:28:11,663 | INFO     | ***************************************
[2025-10-12 22:28:49] 2025-10-13 02:28:11,663 | INFO     | 
[2025-10-12 22:28:49] 2025-10-13 02:28:11,665 | INFO     | architecture information:
[2025-10-12 22:28:49] 2025-10-13 02:28:11,665 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:28:49] 2025-10-13 02:28:11,681 | INFO     | cat /etc/os-release:
[2025-10-12 22:28:49] NAME="CentOS Linux"
[2025-10-12 22:28:49] VERSION="7 (Core)"
[2025-10-12 22:28:49] ID="centos"
[2025-10-12 22:28:49] ID_LIKE="rhel fedora"
[2025-10-12 22:28:49] VERSION_ID="7"
[2025-10-12 22:28:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:28:49] ANSI_COLOR="0;31"
[2025-10-12 22:28:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:28:49] HOME_URL="https://www.centos.org/"
[2025-10-12 22:28:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:28:49] 
[2025-10-12 22:28:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:28:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:28:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:28:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:28:49] 
[2025-10-12 22:28:49] 2025-10-13 02:28:11,681 | INFO     | ***************************************
[2025-10-12 22:28:49] 2025-10-13 02:28:12,183 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:28:49] 2025-10-13 02:28:12,214 | INFO     | sufficient remaining disk space (104810414080 B)
[2025-10-12 22:28:49] 2025-10-13 02:28:12,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:28:49] 2025-10-13 02:28:12,214 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:28:49] 2025-10-13 02:28:12,215 | INFO     | update_server=False
[2025-10-12 22:28:49] 2025-10-13 02:28:12,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:28:49] 2025-10-13 02:28:12,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:28:49] 2025-10-13 02:28:12,435 | INFO     | all data control threads have been joined
[2025-10-12 22:28:49] 2025-10-13 02:28:12,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:28:49] 2025-10-13 02:28:12,525 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:28:49] 2025-10-13 02:28:12,525 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:28:49] 2025-10-13 02:28:12,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:28:49] 2025-10-13 02:28:12,526 | INFO     | will abort loop
[2025-10-12 22:28:49] 2025-10-13 02:28:12,749 | INFO     | all job control threads have been joined
[2025-10-12 22:28:49] 2025-10-13 02:28:13,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:28:49] 2025-10-13 02:28:13,221 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,221 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,440 | INFO     | [data] control thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,530 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,647 | INFO     | all payload control threads have been joined
[2025-10-12 22:28:49] 2025-10-13 02:28:13,751 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,754 | INFO     | [job] control thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,765 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:13,890 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:14,030 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:14,163 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:14,254 | INFO     | [job] validate thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:14,653 | INFO     | [payload] control thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:14,816 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:15,164 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:16,475 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:22,289 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:28:49] 2025-10-13 02:28:23,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:28:49] 2025-10-13 02:28:42,644 | INFO     | PID=19367 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:28:49] 2025-10-13 02:28:42,644 | INFO     | .. there are 4 such processes running
[2025-10-12 22:28:49] 2025-10-13 02:28:42,645 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:28:49] 2025-10-13 02:28:42,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:28:49] 2025-10-13 02:28:42,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:28:49] 2025-10-13 02:28:44,136 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:28:49] 2025-10-13 02:28:44,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999601461056)>', '<ExcThread(monitor, started 139999374120704)>']
[2025-10-12 22:28:49] 2025-10-13 02:28:44,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:28:49] 2025-10-13 02:28:44,655 | INFO     | [monitor] control thread has ended
[2025-10-12 22:28:49] 2025-10-13 02:28:49,336 | INFO     | all workflow threads have been joined
[2025-10-12 22:28:49] 2025-10-13 02:28:49,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:28:49] 2025-10-13 02:28:49,337 | INFO     | traces error code: 0
[2025-10-12 22:28:49] 2025-10-13 02:28:49,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:28:49] 2025-10-13 02:28:49,472 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:28:49] 2025-10-13 02:28:49,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:28:49] 2025-10-13 02:28:49,477 [wrapper] pilotpid: 19367
[2025-10-12 22:28:49] 2025-10-13 02:28:49,479 [wrapper] Pilot exit status: 0
[2025-10-12 22:28:49] 2025-10-13 02:28:49,488 [wrapper] pandaids: 6840429702
[2025-10-12 22:28:49] 2025-10-13 02:28:49,521 [wrapper] cleanup supervisor_pilot 47572 19368
[2025-10-12 22:28:49] 2025-10-13 02:28:49,523 [wrapper] Test setup, not cleaning
[2025-10-12 22:28:49] 2025-10-13 02:28:49,525 [wrapper] apfmon messages muted
[2025-10-12 22:28:49] 2025-10-13 02:28:49,527 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:28:49] 2025-10-13 02:28:49,529 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:28:49]  *** Error codes and diagnostics ***
[2025-10-12 22:28:49]     "exeErrorCode": 0,
[2025-10-12 22:28:49]     "exeErrorDiag": "",
[2025-10-12 22:28:49]     "pilotErrorCode": 0,
[2025-10-12 22:28:49]     "pilotErrorDiag": "",
[2025-10-12 22:28:49]  *** Listing of results directory ***
[2025-10-12 22:28:49] total 411324
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 22:28:49] -rwx------ 1 boincer umatlas     36292 Oct 12 13:27 runpilot2-wrapper.sh
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:27 queuedata.json
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:28:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:48 run_atlas
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:48 job.xml
[2025-10-12 22:28:49] -rw-r--r-- 2 boincer umatlas 222805151 Oct 12 19:48 EVNT.46676267._004817.pool.root.1
[2025-10-12 22:28:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:48 start_atlas.sh
[2025-10-12 22:28:49] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:48 shared
[2025-10-12 22:28:49] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 19:48 input.tar.gz
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:48 boinc_lockfile
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:48 pandaJob.out
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas    975603 Oct 12 19:48 agis_schedconf.cvmfs.json
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas   1560580 Oct 12 19:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:28:49] drwx------ 5 boincer umatlas      4096 Oct 12 19:48 pilot3
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas      6035 Oct 12 22:19 init_data.xml
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas 190985598 Oct 12 22:27 HITS.46676269._084815.pool.root.1
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:27 boinc_task_state.xml
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas      1045 Oct 12 22:28 memory_monitor_summary.json
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas    407109 Oct 12 22:28 log.46676269._084815.job.log.tgz.1
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas      7827 Oct 12 22:28 heartbeat.json
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas        95 Oct 12 22:28 pilot_heartbeat.json
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:28 boinc_mmap_file
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:28 wrapper_checkpoint.txt
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas      5080 Oct 12 22:28 pilotlog.txt
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas   1340982 Oct 12 22:28 log.46676269._084815.job.log.1
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas       357 Oct 12 22:28 output.list
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:28 runtime_log
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas   1771520 Oct 12 22:28 result.tar.gz
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 22:28 runtime_log.err
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas       657 Oct 12 22:28 r3eLDmJ2ES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGWUMDm18jfZn.diag
[2025-10-12 22:28:49] -rw-r--r-- 1 boincer umatlas     21041 Oct 12 22:28 stderr.txt
[2025-10-12 22:28:49] HITS file was successfully produced:
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas 190985598 Oct 12 22:27 shared/HITS.pool.root.1
[2025-10-12 22:28:49]  *** Contents of shared directory: ***
[2025-10-12 22:28:49] total 406408
[2025-10-12 22:28:49] -rw-r--r-- 2 boincer umatlas 222805151 Oct 12 19:48 ATLAS.root_0
[2025-10-12 22:28:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:48 start_atlas.sh
[2025-10-12 22:28:49] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 19:48 input.tar.gz
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas 190985598 Oct 12 22:27 HITS.pool.root.1
[2025-10-12 22:28:49] -rw------- 1 boincer umatlas   1771520 Oct 12 22:28 result.tar.gz
22:28:51 (15535): run_atlas exited; CPU time 72170.794608
22:28:51 (15535): called boinc_finish(0)

</stderr_txt>
]]>

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