Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:07:27 (908138): wrapper (7.7.26015): starting
20:07:27 (908138): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:07:27] Arguments: --nthreads 8
[2025-10-12 20:07:27] Threads: 8
[2025-10-12 20:07:27] Checking for CVMFS
[2025-10-12 20:07:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:07:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:07:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:07:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:07:28] 2.13.2.0 24018 129961 466108 151641 3 474 31062254 32935937 42681 16776704 0 490141907 99.697 399455855 17487 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:07:28] CVMFS is ok
[2025-10-12 20:07:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:07:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:07:28] Further information can be found at the LHC@home message board.
[2025-10-12 20:07:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:07:28] Checking for apptainer binary...
[2025-10-12 20:07:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:07:28] Running /usr/bin/apptainer --version
[2025-10-12 20:07:28] apptainer version 1.4.3-1.el9
[2025-10-12 20:07:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:07:28] c7-2-16.aglt2.org
[2025-10-12 20:07:28] apptainer works
[2025-10-12 20:07:28] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:07:28] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:07:28] Starting ATLAS job with PandaID=6840849838
[2025-10-12 20:07:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:54:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:54:09] 2025-10-13 02:53:00,191 | INFO     | PID=911863 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:54:09] 2025-10-13 02:53:00,191 | INFO     | .. there are 57 such processes running
[2025-10-12 22:54:09] 2025-10-13 02:53:01,192 | INFO     | time since job start (9916s) is within the limit (172800.0s)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,549 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:54:09] 2025-10-13 02:53:01,554 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3219.548708333332
[2025-10-12 22:54:09] 2025-10-13 02:53:01,566 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840849838/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,566 | INFO     | extracted standard info from prmon json
[2025-10-12 22:54:09] 2025-10-13 02:53:01,566 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:54:09] 2025-10-13 02:53:01,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:54:09] 2025-10-13 02:53:01,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:54:09] 2025-10-13 02:53:01,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:54:09] 2025-10-13 02:53:01,569 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:54:09] 2025-10-13 02:53:01,569 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 22:54:09] 2025-10-13 02:53:01,570 | INFO     | sum of deviations: 27868466160.999996
[2025-10-12 22:54:09] 2025-10-13 02:53:01,570 | INFO     | mean x: 1760319014.5
[2025-10-12 22:54:09] 2025-10-13 02:53:01,570 | INFO     | mean y: 2163833.4814814813
[2025-10-12 22:54:09] 2025-10-13 02:53:01,570 | INFO     | -- intersect: -37211079917.074066
[2025-10-12 22:54:09] 2025-10-13 02:53:01,570 | INFO     | intersect: -37211079917.074066
[2025-10-12 22:54:09] 2025-10-13 02:53:01,571 | INFO     | chi2: 1.615238297201886
[2025-10-12 22:54:09] 2025-10-13 02:53:01,571 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,571 | INFO     | sum of deviations: 27793171909.000004
[2025-10-12 22:54:09] 2025-10-13 02:53:01,571 | INFO     | mean x: 1760318862.0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | mean y: 2163714.6433121017
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | -- intersect: -40770557199.09013
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | intersect: -40770557199.09013
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | chi2: 1.6099809181841558
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | current chi2=1.6099809181841558 (change=0.32548627820660486 %)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | right removable region: 156
[2025-10-12 22:54:09] 2025-10-13 02:53:01,572 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | sum of deviations: 3811033803.9999986
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | mean x: 1760319167.0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | mean y: 2194492.5987261147
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | -- intersect: -5588611951.333143
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | intersect: -5588611951.333143
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | chi2: 0.07101505185317583
[2025-10-12 22:54:09] 2025-10-13 02:53:01,573 | INFO     | current chi2=0.07101505185317583 (change=95.6034318913688 %)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,574 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,574 | INFO     | sum of deviations: 3802319923.500001
[2025-10-12 22:54:09] 2025-10-13 02:53:01,574 | INFO     | mean x: 1760319319.5
[2025-10-12 22:54:09] 2025-10-13 02:53:01,574 | INFO     | mean y: 2194453.4407894737
[2025-10-12 22:54:09] 2025-10-13 02:53:01,574 | INFO     | -- intersect: -6144614575.575887
[2025-10-12 22:54:09] 2025-10-13 02:53:01,574 | INFO     | intersect: -6144614575.575887
[2025-10-12 22:54:09] 2025-10-13 02:53:01,575 | INFO     | chi2: 0.05393584092323757
[2025-10-12 22:54:09] 2025-10-13 02:53:01,575 | INFO     | current chi2=0.05393584092323757 (change=24.05012808446534 %)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,575 | INFO     | left removable region: 20
[2025-10-12 22:54:09] 2025-10-13 02:53:01,575 | INFO     | sum of square deviations: 779958810.0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | sum of deviations: 3061315194.9999995
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | mean x: 1760319441.5
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | mean y: 2197403.455882353
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | -- intersect: -6907004191.841006
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | intersect: -6907004191.841006
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | chi2: 0.03703641535871055
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | -- intersect: -6907004191.841006
[2025-10-12 22:54:09] 2025-10-13 02:53:01,576 | INFO     | current memory leak: 3.92 B/s (using 136 data points, chi2=0.04)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | could have reported an average CPU frequency of 3215 MHz (9 samples)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | ..............................
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . Timing measurements:
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . get job = 0 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . initial setup = 2 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . payload setup = 12 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . stage-in = 0 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . payload execution = 9867 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . stage-out = 0 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | . log creation = 0 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,577 | INFO     | ..............................
[2025-10-12 22:54:09] 2025-10-13 02:53:01,667 | INFO     | 
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | job summary report
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | --------------------------------------------------
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | PanDA job id: 6840849838
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | task id: 46676269
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | errors: (none)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | pilot state: finished 
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | transexitcode: 0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | exeerrorcode: 0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | exeerrordiag: 
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | exitcode: 0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | exitmsg: OK
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | cpuconsumptiontime: 31346 s
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | nevents: 400
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | neventsw: 0
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | pid: 919220
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | pgrp: 919220
[2025-10-12 22:54:09] 2025-10-13 02:53:01,668 | INFO     | corecount: 8
[2025-10-12 22:54:09] 2025-10-13 02:53:01,669 | INFO     | event service: False
[2025-10-12 22:54:09] 2025-10-13 02:53:01,669 | INFO     | sizes: {0: 2348804, 8: 2349066, 11: 2349094, 9883: 2377517, 9884: 2386515, 9887: 2386571, 9898: 2386957}
[2025-10-12 22:54:09] 2025-10-13 02:53:01,669 | INFO     | --------------------------------------------------
[2025-10-12 22:54:09] 2025-10-13 02:53:01,669 | INFO     | 
[2025-10-12 22:54:09] 2025-10-13 02:53:01,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 22:54:09] 2025-10-13 02:53:01,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | job 6840849838 has completed (purged errors)
[2025-10-12 22:54:09] 2025-10-13 02:53:01,698 | INFO     | overall cleanup function is called
[2025-10-12 22:54:09] 2025-10-13 02:53:02,707 | INFO     | --- collectZombieJob: --- 10, [919220]
[2025-10-12 22:54:09] 2025-10-13 02:53:02,708 | INFO     | zombie collector waiting for pid 919220
[2025-10-12 22:54:09] 2025-10-13 02:53:02,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:54:09] 2025-10-13 02:53:02,708 | INFO     | collected zombie processes
[2025-10-12 22:54:09] 2025-10-13 02:53:02,708 | INFO     | will attempt to kill all subprocesses of pid=919220
[2025-10-12 22:54:09] 2025-10-13 02:53:03,282 | INFO     | process IDs to be killed: [919220] (in reverse order)
[2025-10-12 22:54:09] 2025-10-13 02:53:03,467 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:54:09] 2025-10-13 02:53:03,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:54:09] 2025-10-13 02:53:03,490 | INFO     | did not find any defunct processes belonging to 919220
[2025-10-12 22:54:09] 2025-10-13 02:53:03,514 | INFO     | did not find any defunct processes belonging to 919220
[2025-10-12 22:54:09] 2025-10-13 02:53:03,514 | INFO     | ready for new job
[2025-10-12 22:54:09] 2025-10-13 02:53:03,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:54:09] 2025-10-13 02:53:03,516 | INFO     | ***************************************
[2025-10-12 22:54:09] 2025-10-13 02:53:03,516 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:54:09] 2025-10-13 02:53:03,516 | INFO     | ***************************************
[2025-10-12 22:54:09] 2025-10-13 02:53:03,516 | INFO     | 
[2025-10-12 22:54:09] 2025-10-13 02:53:03,534 | INFO     | architecture information:
[2025-10-12 22:54:09] 2025-10-13 02:53:03,535 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:54:09] 2025-10-13 02:53:03,552 | INFO     | cat /etc/os-release:
[2025-10-12 22:54:09] NAME="CentOS Linux"
[2025-10-12 22:54:09] VERSION="7 (Core)"
[2025-10-12 22:54:09] ID="centos"
[2025-10-12 22:54:09] ID_LIKE="rhel fedora"
[2025-10-12 22:54:09] VERSION_ID="7"
[2025-10-12 22:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:54:09] ANSI_COLOR="0;31"
[2025-10-12 22:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:54:09] HOME_URL="https://www.centos.org/"
[2025-10-12 22:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:54:09] 
[2025-10-12 22:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:54:09] 
[2025-10-12 22:54:09] 2025-10-13 02:53:03,552 | INFO     | ***************************************
[2025-10-12 22:54:09] 2025-10-13 02:53:04,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 22:54:09] 2025-10-13 02:53:04,111 | INFO     | sufficient remaining disk space (73970745344 B)
[2025-10-12 22:54:09] 2025-10-13 02:53:04,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:54:09] 2025-10-13 02:53:04,111 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:54:09] 2025-10-13 02:53:04,111 | INFO     | update_server=False
[2025-10-12 22:54:09] 2025-10-13 02:53:04,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:54:09] 2025-10-13 02:53:04,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:54:09] 2025-10-13 02:53:04,112 | INFO     | aborting loop
[2025-10-12 22:54:09] 2025-10-13 02:53:04,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:54:09] 2025-10-13 02:53:04,190 | INFO     | all payload control threads have been joined
[2025-10-12 22:54:09] 2025-10-13 02:53:04,237 | INFO     | all job control threads have been joined
[2025-10-12 22:54:09] 2025-10-13 02:53:05,083 | INFO     | all data control threads have been joined
[2025-10-12 22:54:09] 2025-10-13 02:53:05,122 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,123 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,183 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,198 | INFO     | [payload] control thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,243 | INFO     | [job] control thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,682 | INFO     | [job] validate thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,747 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:05,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:54:09] 2025-10-13 02:53:05,962 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:06,049 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:06,088 | INFO     | [data] control thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:06,119 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:06,193 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:06,489 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:06,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:54:09] 2025-10-13 02:53:07,663 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:09,831 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:54:09] 2025-10-13 02:53:34,998 | INFO     | PID=911863 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:54:09] 2025-10-13 02:53:34,998 | INFO     | .. there are 57 such processes running
[2025-10-12 22:54:09] 2025-10-13 02:53:34,999 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:54:09] 2025-10-13 02:53:34,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:54:09] 2025-10-13 02:53:34,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:54:09] 2025-10-13 02:54:03,088 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:54:09] 2025-10-13 02:54:04,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179997263680)>', '<ExcThread(monitor, started 140179067102976)>']
[2025-10-12 22:54:09] 2025-10-13 02:54:04,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:54:09] 2025-10-13 02:54:04,192 | INFO     | [monitor] control thread has ended
[2025-10-12 22:54:09] 2025-10-13 02:54:09,199 | INFO     | all workflow threads have been joined
[2025-10-12 22:54:09] 2025-10-13 02:54:09,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:54:09] 2025-10-13 02:54:09,200 | INFO     | traces error code: 0
[2025-10-12 22:54:09] 2025-10-13 02:54:09,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:54:09] 2025-10-13 02:54:09,489 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:54:09] 2025-10-13 02:54:09,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:54:09] 2025-10-13 02:54:09,496 [wrapper] pilotpid: 911863
[2025-10-12 22:54:09] 2025-10-13 02:54:09,498 [wrapper] Pilot exit status: 0
[2025-10-12 22:54:09] 2025-10-13 02:54:09,542 [wrapper] pandaids: 6840849838
[2025-10-12 22:54:09] 2025-10-13 02:54:09,706 [wrapper] cleanup supervisor_pilot 1754305 911864
[2025-10-12 22:54:09] 2025-10-13 02:54:09,709 [wrapper] Test setup, not cleaning
[2025-10-12 22:54:09] 2025-10-13 02:54:09,712 [wrapper] apfmon messages muted
[2025-10-12 22:54:09] 2025-10-13 02:54:09,715 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:54:09] 2025-10-13 02:54:09,717 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:54:09]  *** Error codes and diagnostics ***
[2025-10-12 22:54:09]     "exeErrorCode": 0,
[2025-10-12 22:54:09]     "exeErrorDiag": "",
[2025-10-12 22:54:09]     "pilotErrorCode": 0,
[2025-10-12 22:54:09]     "pilotErrorDiag": "",
[2025-10-12 22:54:09]  *** Listing of results directory ***
[2025-10-12 22:54:09] total 409484
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:50 queuedata.json
[2025-10-12 22:54:09] -rwx------. 1 boincer umatlas     36292 Oct 12 17:51 runpilot2-wrapper.sh
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:54:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:07 run_atlas
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:07 job.xml
[2025-10-12 22:54:09] -rw-r--r--. 2 boincer umatlas 220277630 Oct 12 20:07 EVNT.46676267._001930.pool.root.1
[2025-10-12 22:54:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:07 start_atlas.sh
[2025-10-12 22:54:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:07 shared
[2025-10-12 22:54:09] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 20:07 input.tar.gz
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:07 boinc_lockfile
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 20:07 pandaJob.out
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas    975603 Oct 12 20:07 agis_schedconf.cvmfs.json
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:54:09] drwx------. 5 boincer umatlas      4096 Oct 12 20:07 pilot3
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas      6935 Oct 12 22:46 init_data.xml
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas 191913663 Oct 12 22:52 HITS.46676269._090430.pool.root.1
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas       530 Oct 12 22:52 boinc_task_state.xml
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas      1033 Oct 12 22:52 memory_monitor_summary.json
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas    380048 Oct 12 22:52 log.46676269._090430.job.log.tgz.1
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas      7769 Oct 12 22:53 heartbeat.json
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas        95 Oct 12 22:53 pilot_heartbeat.json
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:54 boinc_mmap_file
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:54 wrapper_checkpoint.txt
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas      4823 Oct 12 22:54 pilotlog.txt
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas   1228156 Oct 12 22:54 log.46676269._090430.job.log.1
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas       357 Oct 12 22:54 output.list
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:54 runtime_log
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas   1628160 Oct 12 22:54 result.tar.gz
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 22:54 runtime_log.err
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas       655 Oct 12 22:54 HfsMDmd9IS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm36UMDmA1b4fm.diag
[2025-10-12 22:54:09] -rw-r--r--. 1 boincer umatlas     21194 Oct 12 22:54 stderr.txt
[2025-10-12 22:54:09] HITS file was successfully produced:
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas 191913663 Oct 12 22:52 shared/HITS.pool.root.1
[2025-10-12 22:54:09]  *** Contents of shared directory: ***
[2025-10-12 22:54:09] total 404708
[2025-10-12 22:54:09] -rw-r--r--. 2 boincer umatlas 220277630 Oct 12 20:07 ATLAS.root_0
[2025-10-12 22:54:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:07 start_atlas.sh
[2025-10-12 22:54:09] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 20:07 input.tar.gz
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas 191913663 Oct 12 22:52 HITS.pool.root.1
[2025-10-12 22:54:09] -rw-------. 1 boincer umatlas   1628160 Oct 12 22:54 result.tar.gz
22:54:11 (908138): run_atlas exited; CPU time 31769.519678
22:54:11 (908138): called boinc_finish(0)

</stderr_txt>
]]>

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