Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:18 (826802): wrapper (7.7.26015): starting
16:46:18 (826802): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:46:18] Arguments: --nthreads 12
[2025-10-12 16:46:18] Threads: 12
[2025-10-12 16:46:18] Checking for CVMFS
[2025-10-12 16:46:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:46:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:46:21] 2.11.5.0 2582 32135 196656 151641 1 435 38343470 45568001 26913 130560 0 355795002 99.893 119036073 8596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 16:46:21] CVMFS is ok
[2025-10-12 16:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:46:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:46:21] Further information can be found at the LHC@home message board.
[2025-10-12 16:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:46:21] Checking for apptainer binary...
[2025-10-12 16:46:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:46:21] Running /usr/bin/apptainer --version
[2025-10-12 16:46:21] apptainer version 1.4.1-1.el9
[2025-10-12 16:46:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:46:22] wns0047.triumf.lcg
[2025-10-12 16:46:22] apptainer works
[2025-10-12 16:46:22] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:46:22] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:46:22] Starting ATLAS job with PandaID=6840834823
[2025-10-12 16:46:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:52:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:52:36] 2025-10-12 23:52:01,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:52:36] 2025-10-12 23:52:01,796 | WARNING  | wrong length of table data, x=[1760312937.0], y=[1790.0] (must be same and length>=4)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,796 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | ..............................
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . Timing measurements:
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . get job = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . initial setup = 5 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . payload setup = 25 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . stage-in = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . payload execution = 57 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . stage-out = 1 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . log creation = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | ..............................
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840834823/pilotlog.txt
[2025-10-12 16:52:36] 2025-10-12 23:52:01,941 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 16:52:36] - Log from pilotlog.txt -
[2025-10-12 16:52:36] 2025-10-12 23:52:01,771 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840834823/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | INFO     | extracted standard info from prmon json
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:52:36] 2025-10-12 23:52:01,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:52:36] 2025-10-12 23:52:01,796 | WARNING  | wrong length of table data, x=[1760312937.0], y=[1790.0] (must be same and length>=4)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,796 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | ..............................
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . Timing measurements:
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . get job = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . initial setup = 5 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . payload setup = 25 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . stage-in = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . payload execution = 57 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . stage-out = 1 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . log creation = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | ..............................
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840834823/pilotlog.txt
[2025-10-12 16:52:36] 2025-10-12 23:52:01,941 | WARNING  | 
[2025-10-12 16:52:36] [begin log extracts]
[2025-10-12 16:52:36] - Log from pilotlog.txt -
[2025-10-12 16:52:36] 2025-10-12 23:52:01,771 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840834823/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | INFO     | extracted standard info from prmon json
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:52:36] 2025-10-12 23:52:01,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:52:36] 2025-10-12 23:52:01,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:52:36] 2025-10-12 23:52:01,796 | WARNING  | wrong length of table data, x=[1760312937.0], y=[1790.0] (must be same and length>=4)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,796 | INFO     | could have reported an average CPU frequency of 2753 MHz (4 samples)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | ..............................
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . Timing measurements:
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . get job = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . initial setup = 5 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . payload setup = 25 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . stage-in = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . payload execution = 57 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . stage-out = 1 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | . log creation = 0 s
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | ..............................
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:52:36] 2025-10-12 23:52:01,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840834823/pilotlog.txt
[2025-10-12 16:52:36] [end log extracts]
[2025-10-12 16:52:36] 2025-10-12 23:52:01,941 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 16:52:36] 2025-10-12 23:52:01,942 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 16:52:36] 2025-10-12 23:52:02,297 | INFO     | 
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | job summary report
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | --------------------------------------------------
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | PanDA job id: 6840834823
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | task id: 46676269
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 16:49:25,179 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | pilot state: failed 
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | transexitcode: 65
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | exeerrorcode: 65
[2025-10-12 16:52:36] 2025-10-12 23:52:02,312 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | exitcode: 65
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | nevents: 0
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | neventsw: 0
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | pid: 837678
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | pgrp: 837678
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | corecount: 12
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | event service: False
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | sizes: {0: 2348803, 11: 2348803, 22: 2348887, 23: 2349121, 34: 2349149, 87: 2372510, 89: 2376802, 90: 2376830, 233: 2376996}
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | --------------------------------------------------
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | 
[2025-10-12 16:52:36] 2025-10-12 23:52:02,313 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 16:52:36] 2025-10-12 23:52:02,479 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | job 6840834823 has completed (purged errors)
[2025-10-12 16:52:36] 2025-10-12 23:52:02,480 | INFO     | overall cleanup function is called
[2025-10-12 16:52:36] 2025-10-12 23:52:03,487 | INFO     | --- collectZombieJob: --- 10, [837678]
[2025-10-12 16:52:36] 2025-10-12 23:52:03,487 | INFO     | zombie collector waiting for pid 837678
[2025-10-12 16:52:36] 2025-10-12 23:52:03,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:52:36] 2025-10-12 23:52:03,487 | INFO     | collected zombie processes
[2025-10-12 16:52:36] 2025-10-12 23:52:03,487 | INFO     | will attempt to kill all subprocesses of pid=837678
[2025-10-12 16:52:36] 2025-10-12 23:52:04,118 | INFO     | process IDs to be killed: [837678] (in reverse order)
[2025-10-12 16:52:36] 2025-10-12 23:52:04,228 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:52:36] 2025-10-12 23:52:04,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:52:36] 2025-10-12 23:52:04,267 | INFO     | did not find any defunct processes belonging to 837678
[2025-10-12 16:52:36] 2025-10-12 23:52:04,312 | INFO     | did not find any defunct processes belonging to 837678
[2025-10-12 16:52:36] 2025-10-12 23:52:04,312 | INFO     | ready for new job
[2025-10-12 16:52:36] 2025-10-12 23:52:04,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:52:36] 2025-10-12 23:52:04,314 | INFO     | ***************************************
[2025-10-12 16:52:36] 2025-10-12 23:52:04,314 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:52:36] 2025-10-12 23:52:04,314 | INFO     | ***************************************
[2025-10-12 16:52:36] 2025-10-12 23:52:04,314 | INFO     | 
[2025-10-12 16:52:36] 2025-10-12 23:52:04,316 | INFO     | architecture information:
[2025-10-12 16:52:36] 2025-10-12 23:52:04,334 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:52:36] 2025-10-12 23:52:04,411 | INFO     | cat /etc/os-release:
[2025-10-12 16:52:36] NAME="CentOS Linux"
[2025-10-12 16:52:36] VERSION="7 (Core)"
[2025-10-12 16:52:36] ID="centos"
[2025-10-12 16:52:36] ID_LIKE="rhel fedora"
[2025-10-12 16:52:36] VERSION_ID="7"
[2025-10-12 16:52:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:52:36] ANSI_COLOR="0;31"
[2025-10-12 16:52:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:52:36] HOME_URL="https://www.centos.org/"
[2025-10-12 16:52:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:52:36] 
[2025-10-12 16:52:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:52:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:52:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:52:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:52:36] 
[2025-10-12 16:52:36] 2025-10-12 23:52:04,411 | INFO     | ***************************************
[2025-10-12 16:52:36] 2025-10-12 23:52:04,915 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 16:52:36] 2025-10-12 23:52:05,020 | INFO     | sufficient remaining disk space (1878949625856 B)
[2025-10-12 16:52:36] 2025-10-12 23:52:05,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:52:36] 2025-10-12 23:52:05,021 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:52:36] 2025-10-12 23:52:05,021 | INFO     | update_server=False
[2025-10-12 16:52:36] 2025-10-12 23:52:05,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:52:36] 2025-10-12 23:52:05,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:52:36] 2025-10-12 23:52:05,022 | INFO     | aborting loop
[2025-10-12 16:52:36] 2025-10-12 23:52:05,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:52:36] 2025-10-12 23:52:05,242 | INFO     | all data control threads have been joined
[2025-10-12 16:52:36] 2025-10-12 23:52:05,369 | INFO     | all job control threads have been joined
[2025-10-12 16:52:36] 2025-10-12 23:52:05,510 | INFO     | all payload control threads have been joined
[2025-10-12 16:52:36] 2025-10-12 23:52:06,027 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,028 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,154 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,240 | INFO     | [job] validate thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,248 | INFO     | [data] control thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,286 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,375 | INFO     | [job] control thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:52:36] 2025-10-12 23:52:06,475 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,516 | INFO     | [payload] control thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:06,617 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:07,042 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:07,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:52:36] 2025-10-12 23:52:07,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:07,506 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:08,319 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:08,444 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:09,040 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:52:36] 2025-10-12 23:52:11,568 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:52:36] 2025-10-12 23:52:13,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051137775424)>', '<ExcThread(monitor, started 140050218084096)>']
[2025-10-12 16:52:36] 2025-10-12 23:52:18,472 | INFO     | all workflow threads have been joined
[2025-10-12 16:52:36] 2025-10-12 23:52:18,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:52:36] 2025-10-12 23:52:18,472 | INFO     | traces error code: 0
[2025-10-12 16:52:36] 2025-10-12 23:52:18,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:52:36] 2025-10-12 23:52:34,900 | INFO     | PID=830643 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 16:52:36] 2025-10-12 23:52:34,901 | INFO     | .. there are 49 such processes running
[2025-10-12 16:52:36] 2025-10-12 23:52:34,901 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:52:36] 2025-10-12 23:52:34,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:52:36] 2025-10-12 23:52:34,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:52:36] 2025-10-12 23:52:34,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:52:36] 2025-10-12 23:52:34,901 | INFO     | [monitor] control thread has ended
[2025-10-12 16:52:36] 2025-10-12 23:52:35,405 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:52:36] 2025-10-12 23:52:35,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:52:36] 2025-10-12 23:52:35,414 [wrapper] pilotpid: 830643
[2025-10-12 16:52:36] 2025-10-12 23:52:35,421 [wrapper] Pilot exit status: 0
[2025-10-12 16:52:36] 2025-10-12 23:52:35,495 [wrapper] pandaids: 6840834823
[2025-10-12 16:52:36] 2025-10-12 23:52:35,933 [wrapper] cleanup supervisor_pilot  830649 830644
[2025-10-12 16:52:36] 2025-10-12 23:52:35,963 [wrapper] Test setup, not cleaning
[2025-10-12 16:52:36] 2025-10-12 23:52:35,980 [wrapper] apfmon messages muted
[2025-10-12 16:52:36] 2025-10-12 23:52:36,039 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:52:36] 2025-10-12 23:52:36,056 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:52:36]  *** Error codes and diagnostics ***
[2025-10-12 16:52:36]     "exeErrorCode": 65,
[2025-10-12 16:52:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 16:52:36]     "pilotErrorCode": 1305,
[2025-10-12 16:52:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 16:52:36]  *** Listing of results directory ***
[2025-10-12 16:52:36] total 219656
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:31 pilot3.tar.gz
[2025-10-12 16:52:36] -rwx------. 1 boinc boinc     36292 Oct 12 14:50 runpilot2-wrapper.sh
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:50 queuedata.json
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:52:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:46 run_atlas
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:46 job.xml
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc      6594 Oct 12 16:46 init_data.xml
[2025-10-12 16:52:36] -rw-r--r--. 2 boinc boinc 220797655 Oct 12 16:46 EVNT.46676267._004845.pool.root.1
[2025-10-12 16:52:36] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:46 start_atlas.sh
[2025-10-12 16:52:36] drwxrwx--x. 2 boinc boinc      4096 Oct 12 16:46 shared
[2025-10-12 16:52:36] -rw-r--r--. 2 boinc boinc    569679 Oct 12 16:46 input.tar.gz
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:46 boinc_lockfile
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc      2549 Oct 12 16:46 pandaJob.out
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc    975603 Oct 12 16:47 agis_schedconf.cvmfs.json
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc   1560580 Oct 12 16:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:52:36] drwx------. 5 boinc boinc      4096 Oct 12 16:47 pilot3
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc       524 Oct 12 16:49 boinc_task_state.xml
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc       954 Oct 12 16:49 memory_monitor_summary.json
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc     22432 Oct 12 16:49 log.46676269._090416.job.log.tgz.1
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc      8395 Oct 12 16:52 heartbeat.json
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:52 boinc_mmap_file
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc        23 Oct 12 16:52 wrapper_checkpoint.txt
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc       822 Oct 12 16:52 pilotlog.txt
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc        95 Oct 12 16:52 pilot_heartbeat.json
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc     95979 Oct 12 16:52 log.46676269._090416.job.log.1
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc       188 Oct 12 16:52 output.list
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:52 runtime_log
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc    133120 Oct 12 16:52 result.tar.gz
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc      8528 Oct 12 16:52 runtime_log.err
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc       643 Oct 12 16:52 3NtMDmP8IS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkklNDmfwSvMn.diag
[2025-10-12 16:52:36] -rw-r--r--. 1 boinc boinc     21732 Oct 12 16:52 stderr.txt
[2025-10-12 16:52:36] No HITS result produced
[2025-10-12 16:52:36]  *** Contents of shared directory: ***
[2025-10-12 16:52:36] total 216332
[2025-10-12 16:52:36] -rw-r--r--. 2 boinc boinc 220797655 Oct 12 16:46 ATLAS.root_0
[2025-10-12 16:52:36] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:46 start_atlas.sh
[2025-10-12 16:52:36] -rw-r--r--. 2 boinc boinc    569679 Oct 12 16:46 input.tar.gz
[2025-10-12 16:52:36] -rw-------. 1 boinc boinc    133120 Oct 12 16:52 result.tar.gz
16:52:38 (826802): run_atlas exited; CPU time 31.300757
16:52:38 (826802): called boinc_finish(0)

</stderr_txt>
]]>

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