Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:38:56 (3803108): wrapper (7.7.26015): starting
20:38:56 (3803108): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:38:56] Arguments: --nthreads 8
[2025-10-12 20:38:56] Threads: 8
[2025-10-12 20:38:56] Checking for CVMFS
[2025-10-12 20:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:38:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:38:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:38:57] 2.13.2.0 2437980 129975 271548 151642 2 253 26482598 32935937 18244 16776704 0 184899843 99.619 200605773 29381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:38:57] CVMFS is ok
[2025-10-12 20:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:38:57] Further information can be found at the LHC@home message board.
[2025-10-12 20:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:38:57] Checking for apptainer binary...
[2025-10-12 20:38:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:38:57] Running /usr/bin/apptainer --version
[2025-10-12 20:38:57] apptainer version 1.4.3-1.el9
[2025-10-12 20:38:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:38:57] c6-2-29-1.aglt2.org
[2025-10-12 20:38:57] apptainer works
[2025-10-12 20:38:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:38:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:38:58] Starting ATLAS job with PandaID=6840714613
[2025-10-12 20:38:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:54:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:54:45] 2025-10-13 03:53:47,935 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840714613/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:54:45] 2025-10-13 03:53:47,936 | INFO     | extracted standard info from prmon json
[2025-10-12 23:54:45] 2025-10-13 03:53:47,936 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:54:45] 2025-10-13 03:53:47,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:54:45] 2025-10-13 03:53:47,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:54:45] 2025-10-13 03:53:47,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:54:45] 2025-10-13 03:53:47,942 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:54:45] 2025-10-13 03:53:47,943 | INFO     | sum of square deviations: 2160639074.9214754
[2025-10-12 23:54:45] 2025-10-13 03:53:47,944 | INFO     | sum of deviations: -37323980676.46597
[2025-10-12 23:54:45] 2025-10-13 03:53:47,944 | INFO     | mean x: 1760321796.2408378
[2025-10-12 23:54:45] 2025-10-13 03:53:47,944 | INFO     | mean y: 2160596.1623036647
[2025-10-12 23:54:45] 2025-10-13 03:53:47,944 | INFO     | -- intersect: 30410856555.54771
[2025-10-12 23:54:45] 2025-10-13 03:53:47,944 | INFO     | intersect: 30410856555.54771
[2025-10-12 23:54:45] 2025-10-13 03:53:47,945 | INFO     | chi2: 2.782422176470306
[2025-10-12 23:54:45] 2025-10-13 03:53:47,945 | INFO     | sum of square deviations: 1995375587.1236632
[2025-10-12 23:54:45] 2025-10-13 03:53:47,946 | INFO     | sum of deviations: -25291068066.365593
[2025-10-12 23:54:45] 2025-10-13 03:53:47,946 | INFO     | mean x: 1760321643.7473118
[2025-10-12 23:54:45] 2025-10-13 03:53:47,946 | INFO     | mean y: 2171505.2688172045
[2025-10-12 23:54:45] 2025-10-13 03:53:47,946 | INFO     | -- intersect: 22313968240.68246
[2025-10-12 23:54:45] 2025-10-13 03:53:47,947 | INFO     | intersect: 22313968240.68246
[2025-10-12 23:54:45] 2025-10-13 03:53:47,947 | INFO     | chi2: 2.134390937671751
[2025-10-12 23:54:45] 2025-10-13 03:53:47,947 | INFO     | current chi2=2.134390937671751 (change=23.290183793051384 %)
[2025-10-12 23:54:45] 2025-10-13 03:53:47,947 | INFO     | right removable region: 185
[2025-10-12 23:54:45] 2025-10-13 03:53:47,948 | INFO     | sum of square deviations: 1995347527.1236632
[2025-10-12 23:54:45] 2025-10-13 03:53:47,949 | INFO     | sum of deviations: -62442942373.451645
[2025-10-12 23:54:45] 2025-10-13 03:53:47,949 | INFO     | mean x: 1760321948.7473118
[2025-10-12 23:54:45] 2025-10-13 03:53:47,949 | INFO     | mean y: 2183502.0967741935
[2025-10-12 23:54:45] 2025-10-13 03:53:47,949 | INFO     | -- intersect: 55090172190.86524
[2025-10-12 23:54:45] 2025-10-13 03:53:47,949 | INFO     | intersect: 55090172190.86524
[2025-10-12 23:54:45] 2025-10-13 03:53:47,949 | INFO     | chi2: 1.2805247818651724
[2025-10-12 23:54:45] 2025-10-13 03:53:47,950 | INFO     | current chi2=1.2805247818651724 (change=53.97805578556716 %)
[2025-10-12 23:54:45] 2025-10-13 03:53:47,950 | INFO     | sum of square deviations: 1838718649.8121595
[2025-10-12 23:54:45] 2025-10-13 03:53:47,951 | INFO     | sum of deviations: -57938175763.69616
[2025-10-12 23:54:45] 2025-10-13 03:53:47,951 | INFO     | mean x: 1760322101.2486188
[2025-10-12 23:54:45] 2025-10-13 03:53:47,951 | INFO     | mean y: 2179047.215469613
[2025-10-12 23:54:45] 2025-10-13 03:53:47,951 | INFO     | -- intersect: 55470073122.9516
[2025-10-12 23:54:45] 2025-10-13 03:53:47,951 | INFO     | intersect: 55470073122.9516
[2025-10-12 23:54:45] 2025-10-13 03:53:47,952 | INFO     | chi2: 1.246065054504923
[2025-10-12 23:54:45] 2025-10-13 03:53:47,952 | INFO     | current chi2=1.246065054504923 (change=2.6910629023560495 %)
[2025-10-12 23:54:45] 2025-10-13 03:53:47,952 | INFO     | left removable region: 20
[2025-10-12 23:54:45] 2025-10-13 03:53:47,952 | INFO     | sum of square deviations: 1392931868.7272735
[2025-10-12 23:54:45] 2025-10-13 03:53:47,953 | INFO     | sum of deviations: -27365479123.818176
[2025-10-12 23:54:45] 2025-10-13 03:53:47,953 | INFO     | mean x: 1760322223.2727273
[2025-10-12 23:54:45] 2025-10-13 03:53:47,953 | INFO     | mean y: 2170262.9515151517
[2025-10-12 23:54:45] 2025-10-13 03:53:47,953 | INFO     | -- intersect: 34585384369.595505
[2025-10-12 23:54:45] 2025-10-13 03:53:47,953 | INFO     | intersect: 34585384369.595505
[2025-10-12 23:54:45] 2025-10-13 03:53:47,953 | INFO     | chi2: 0.4717161076198137
[2025-10-12 23:54:45] 2025-10-13 03:53:47,954 | INFO     | -- intersect: 34585384369.595505
[2025-10-12 23:54:45] 2025-10-13 03:53:47,954 | INFO     | current memory leak: -19.65 B/s (using 165 data points, chi2=0.47)
[2025-10-12 23:54:45] 2025-10-13 03:53:47,954 | INFO     | could have reported an average CPU frequency of 2706 MHz (10 samples)
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | ..............................
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . Timing measurements:
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . get job = 0 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . initial setup = 3 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . payload setup = 12 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . stage-in = 0 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . payload execution = 11610 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . stage-out = 2 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | . log creation = 0 s
[2025-10-12 23:54:45] 2025-10-13 03:53:47,956 | INFO     | ..............................
[2025-10-12 23:54:45] 2025-10-13 03:53:47,955 | INFO     | monitor loop #734: job 0:6840714613 is in state 'finished'
[2025-10-12 23:54:45] 2025-10-13 03:53:47,963 | WARNING  | exception caught: deque index out of range
[2025-10-12 23:54:45] 2025-10-13 03:53:48,057 | INFO     | 
[2025-10-12 23:54:45] 2025-10-13 03:53:48,057 | INFO     | job summary report
[2025-10-12 23:54:45] 2025-10-13 03:53:48,057 | INFO     | --------------------------------------------------
[2025-10-12 23:54:45] 2025-10-13 03:53:48,057 | INFO     | PanDA job id: 6840714613
[2025-10-12 23:54:45] 2025-10-13 03:53:48,057 | INFO     | task id: 46676269
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | errors: (none)
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | pilot state: finished 
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | transexitcode: 0
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | exeerrorcode: 0
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | exeerrordiag: 
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | exitcode: 0
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | exitmsg: OK
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | cpuconsumptiontime: 45398 s
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | nevents: 400
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | neventsw: 0
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | pid: 3819784
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | pgrp: 3819784
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | corecount: 8
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | event service: False
[2025-10-12 23:54:45] 2025-10-13 03:53:48,058 | INFO     | sizes: {0: 2348686, 1: 2348885, 9: 2349147, 12: 2349175, 11627: 2378718, 11631: 2387716, 11632: 2387900, 11649: 2388094}
[2025-10-12 23:54:45] 2025-10-13 03:53:48,060 | INFO     | --------------------------------------------------
[2025-10-12 23:54:45] 2025-10-13 03:53:48,060 | INFO     | 
[2025-10-12 23:54:45] 2025-10-13 03:53:48,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:54:45] 2025-10-13 03:53:48,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | job 6840714613 has completed (purged errors)
[2025-10-12 23:54:45] 2025-10-13 03:53:48,125 | INFO     | overall cleanup function is called
[2025-10-12 23:54:45] 2025-10-13 03:53:49,133 | INFO     | --- collectZombieJob: --- 10, [3819784]
[2025-10-12 23:54:45] 2025-10-13 03:53:49,134 | INFO     | zombie collector waiting for pid 3819784
[2025-10-12 23:54:45] 2025-10-13 03:53:49,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:54:45] 2025-10-13 03:53:49,134 | INFO     | collected zombie processes
[2025-10-12 23:54:45] 2025-10-13 03:53:49,134 | INFO     | will attempt to kill all subprocesses of pid=3819784
[2025-10-12 23:54:45] 2025-10-13 03:53:49,609 | INFO     | process IDs to be killed: [3819784] (in reverse order)
[2025-10-12 23:54:45] 2025-10-13 03:53:49,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:54:45] 2025-10-13 03:53:49,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:54:45] 2025-10-13 03:53:49,766 | INFO     | did not find any defunct processes belonging to 3819784
[2025-10-12 23:54:45] 2025-10-13 03:53:49,791 | INFO     | did not find any defunct processes belonging to 3819784
[2025-10-12 23:54:45] 2025-10-13 03:53:49,791 | INFO     | ready for new job
[2025-10-12 23:54:45] 2025-10-13 03:53:49,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:54:45] 2025-10-13 03:53:49,795 | INFO     | ***************************************
[2025-10-12 23:54:45] 2025-10-13 03:53:49,797 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:54:45] 2025-10-13 03:53:49,797 | INFO     | ***************************************
[2025-10-12 23:54:45] 2025-10-13 03:53:49,797 | INFO     | 
[2025-10-12 23:54:45] 2025-10-13 03:53:49,817 | INFO     | architecture information:
[2025-10-12 23:54:45] 2025-10-13 03:53:49,818 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:54:45] 2025-10-13 03:53:49,853 | INFO     | cat /etc/os-release:
[2025-10-12 23:54:45] NAME="CentOS Linux"
[2025-10-12 23:54:45] VERSION="7 (Core)"
[2025-10-12 23:54:45] ID="centos"
[2025-10-12 23:54:45] ID_LIKE="rhel fedora"
[2025-10-12 23:54:45] VERSION_ID="7"
[2025-10-12 23:54:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:54:45] ANSI_COLOR="0;31"
[2025-10-12 23:54:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:54:45] HOME_URL="https://www.centos.org/"
[2025-10-12 23:54:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:54:45] 
[2025-10-12 23:54:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:54:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:54:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:54:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:54:45] 
[2025-10-12 23:54:45] 2025-10-13 03:53:49,853 | INFO     | ***************************************
[2025-10-12 23:54:45] 2025-10-13 03:53:50,357 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:54:45] 2025-10-13 03:53:50,394 | INFO     | sufficient remaining disk space (75203870720 B)
[2025-10-12 23:54:45] 2025-10-13 03:53:50,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:54:45] 2025-10-13 03:53:50,395 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:54:45] 2025-10-13 03:53:50,395 | INFO     | update_server=False
[2025-10-12 23:54:45] 2025-10-13 03:53:50,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:54:45] 2025-10-13 03:53:50,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:54:45] 2025-10-13 03:53:50,403 | INFO     | all data control threads have been joined
[2025-10-12 23:54:45] 2025-10-13 03:53:50,468 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 23:54:45] 2025-10-13 03:53:50,468 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 23:54:45] 2025-10-13 03:53:50,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:54:45] 2025-10-13 03:53:50,468 | INFO     | will abort loop
[2025-10-12 23:54:45] 2025-10-13 03:53:50,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:54:45] 2025-10-13 03:53:50,937 | INFO     | all payload control threads have been joined
[2025-10-12 23:54:45] 2025-10-13 03:53:51,402 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,413 | INFO     | [data] control thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,458 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,475 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,484 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,945 | INFO     | [payload] control thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:51,987 | INFO     | all job control threads have been joined
[2025-10-12 23:54:45] 2025-10-13 03:53:52,327 | INFO     | [job] validate thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:52,404 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:52,505 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:52,583 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:52,677 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:52,771 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:52,996 | INFO     | [job] control thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:53,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:54:45] 2025-10-13 03:53:54,075 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:53:54,405 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:54:45] 2025-10-13 03:54:15,805 [wrapper] supervise_pilot (15 min periods counter: 14)
[2025-10-12 23:54:45] 2025-10-13 03:54:21,830 | INFO     | PID=3808209 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:54:45] 2025-10-13 03:54:21,830 | INFO     | .. there are 22 such processes running
[2025-10-12 23:54:45] 2025-10-13 03:54:21,831 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:54:45] 2025-10-13 03:54:21,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:54:45] 2025-10-13 03:54:21,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:54:45] 2025-10-13 03:54:38,794 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:54:45] 2025-10-13 03:54:38,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140670037636928)>', '<ExcThread(monitor, started 140669171529472)>']
[2025-10-12 23:54:45] 2025-10-13 03:54:38,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:54:45] 2025-10-13 03:54:38,943 | INFO     | [monitor] control thread has ended
[2025-10-12 23:54:45] 2025-10-13 03:54:43,898 | INFO     | all workflow threads have been joined
[2025-10-12 23:54:45] 2025-10-13 03:54:43,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:54:45] 2025-10-13 03:54:43,899 | INFO     | traces error code: 0
[2025-10-12 23:54:45] 2025-10-13 03:54:43,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:54:45] 2025-10-13 03:54:44,751 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:54:45] 2025-10-13 03:54:44,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:54:45] 2025-10-13 03:54:44,810 [wrapper] pilotpid: 3808209
[2025-10-12 23:54:45] 2025-10-13 03:54:44,824 [wrapper] Pilot exit status: 0
[2025-10-12 23:54:45] 2025-10-13 03:54:44,907 [wrapper] pandaids: 6840714613
[2025-10-12 23:54:45] 2025-10-13 03:54:45,033 [wrapper] cleanup supervisor_pilot  207074 3808210
[2025-10-12 23:54:45] 2025-10-13 03:54:45,087 [wrapper] Test setup, not cleaning
[2025-10-12 23:54:45] 2025-10-13 03:54:45,101 [wrapper] apfmon messages muted
[2025-10-12 23:54:45] 2025-10-13 03:54:45,109 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:54:45] 2025-10-13 03:54:45,112 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:54:45]  *** Error codes and diagnostics ***
[2025-10-12 23:54:45]     "exeErrorCode": 0,
[2025-10-12 23:54:45]     "exeErrorDiag": "",
[2025-10-12 23:54:45]     "pilotErrorCode": 0,
[2025-10-12 23:54:45]     "pilotErrorDiag": "",
[2025-10-12 23:54:45]  *** Listing of results directory ***
[2025-10-12 23:54:45] total 408164
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 23:54:45] -rwx------. 1 boincer umatlas     36292 Oct 12 15:57 runpilot2-wrapper.sh
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:57 queuedata.json
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:54:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:38 run_atlas
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:38 job.xml
[2025-10-12 23:54:45] -rw-r--r--. 2 boincer umatlas 220080545 Oct 12 20:38 EVNT.46676267._004475.pool.root.1
[2025-10-12 23:54:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:38 start_atlas.sh
[2025-10-12 23:54:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:38 shared
[2025-10-12 23:54:45] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 20:38 input.tar.gz
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:38 boinc_lockfile
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 20:38 pandaJob.out
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas    975603 Oct 12 20:39 agis_schedconf.cvmfs.json
[2025-10-12 23:54:45] drwx------. 5 boincer umatlas      4096 Oct 12 20:39 pilot3
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 23:48 init_data.xml
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas 190112779 Oct 12 23:52 HITS.46676269._088009.pool.root.1
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:52 boinc_task_state.xml
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas      1043 Oct 12 23:53 memory_monitor_summary.json
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas    415100 Oct 12 23:53 log.46676269._088009.job.log.tgz.1
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas      7831 Oct 12 23:53 heartbeat.json
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas        95 Oct 12 23:54 pilot_heartbeat.json
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:54 boinc_mmap_file
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:54 wrapper_checkpoint.txt
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas      5010 Oct 12 23:54 pilotlog.txt
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas   1516148 Oct 12 23:54 log.46676269._088009.job.log.1
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas       357 Oct 12 23:54 output.list
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:54 runtime_log
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas   1945600 Oct 12 23:54 result.tar.gz
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 23:54 runtime_log.err
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas       655 Oct 12 23:54 cuKODmvMHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmusUMDmXARyMo.diag
[2025-10-12 23:54:45] -rw-r--r--. 1 boincer umatlas     21152 Oct 12 23:54 stderr.txt
[2025-10-12 23:54:45] HITS file was successfully produced:
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas 190112779 Oct 12 23:52 shared/HITS.pool.root.1
[2025-10-12 23:54:45]  *** Contents of shared directory: ***
[2025-10-12 23:54:45] total 403068
[2025-10-12 23:54:45] -rw-r--r--. 2 boincer umatlas 220080545 Oct 12 20:38 ATLAS.root_0
[2025-10-12 23:54:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:38 start_atlas.sh
[2025-10-12 23:54:45] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 20:38 input.tar.gz
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas 190112779 Oct 12 23:52 HITS.pool.root.1
[2025-10-12 23:54:45] -rw-------. 1 boincer umatlas   1945600 Oct 12 23:54 result.tar.gz
23:54:46 (3803108): run_atlas exited; CPU time 45747.928891
23:54:46 (3803108): called boinc_finish(0)

</stderr_txt>
]]>

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