Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 03:42:16 (41312): vboxwrapper version 26210
2025-10-13 03:42:16 (41312): BOINC client version: 8.2.4
2025-10-13 03:42:17 (41312): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-10-13 03:42:17 (41312): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 03:42:17 (41312): Create VM. (boinc_e48f11f152a190db, slot#3)
2025-10-13 03:42:18 (41312): Setting Memory Size for VM. (4300MB)
2025-10-13 03:42:18 (41312): Setting CPU Count for VM. (3)
2025-10-13 03:42:19 (41312): Setting Chipset Options for VM.
2025-10-13 03:42:19 (41312): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 03:42:19 (41312): Setting Boot Options for VM.
2025-10-13 03:42:20 (41312): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 03:42:20 (41312): Enabling VM Network Access.
2025-10-13 03:42:20 (41312): Disabling USB Support for VM.
2025-10-13 03:42:20 (41312): Disabling COM Port Support for VM.
2025-10-13 03:42:21 (41312): Disabling LPT Port Support for VM.
2025-10-13 03:42:21 (41312): Disabling Audio Support for VM.
2025-10-13 03:42:21 (41312): Disabling Clipboard Support for VM.
2025-10-13 03:42:21 (41312): Disabling Drag and Drop Support for VM.
2025-10-13 03:42:22 (41312): Adding storage controller(s) to VM.
2025-10-13 03:42:22 (41312): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 03:42:22 (41312): Adding VirtualBox Guest Additions to VM.
2025-10-13 03:42:23 (41312): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 03:42:23 (41312): forwarding host port 42398 to guest port 80
2025-10-13 03:42:23 (41312): Enabling remote desktop for VM.
2025-10-13 03:42:23 (41312): Required extension pack not installed, remote desktop not enabled.
2025-10-13 03:42:23 (41312): Enabling shared directory for VM.
2025-10-13 03:42:24 (41312): Starting VM using VBoxManage interface. (boinc_e48f11f152a190db, slot#3)
2025-10-13 03:42:31 (41312): Successfully started VM. (PID = '40648')
2025-10-13 03:42:31 (41312): Reporting VM Process ID to BOINC.
2025-10-13 03:42:31 (41312): Guest Log: BIOS: VirtualBox 7.0.22
2025-10-13 03:42:31 (41312): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 03:42:31 (41312): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 03:42:31 (41312): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 03:42:31 (41312): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 03:42:31 (41312): Detected: Web Application Enabled (http://localhost:42398)
2025-10-13 03:42:31 (41312): Preference change detected
2025-10-13 03:42:31 (41312): Setting CPU throttle for VM. (90%)
2025-10-13 03:42:31 (41312): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 03:42:33 (41312): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 03:42:33 (41312): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 03:42:36 (41312): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 03:42:36 (41312): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 03:42:36 (41312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 03:43:41 (41312): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 03:43:41 (41312): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 03:43:48 (41312): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000149 main     Log opened 2025-10-13T03:43:45.864928000Z
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000244 main     OS Product: Linux
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000267 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000288 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000310 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000310 main     Process ID: 1292
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000310 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 03:43:48 (41312): Guest Log: 00:00:00.000905 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 03:43:48 (41312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 03:43:48 (41312): Guest Log: [INFO] Mounting shared directory
2025-10-13 03:43:48 (41312): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 03:43:50 (41312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 03:43:50 (41312): Guest Log: [INFO] Detected branch: prod
2025-10-13 03:43:50 (41312): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 03:43:50 (41312): Guest Log: Copying input files
2025-10-13 03:43:52 (41312): Guest Log: Copied input files into RunAtlas.
2025-10-13 03:43:53 (41312): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 03:43:53 (41312): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 03:43:53 (41312): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 03:43:53 (41312): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 03:43:58 (41312): Guest Log: 00:00:10.033348 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 590 821 700 000ns (GuestNow=1 760 323 435 047 175 000 ns GuestLast=1 760 327 025 868 875 000 ns fSetTimeLastLoop=true )
2025-10-13 03:44:01 (41312): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 03:44:01 (41312): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 03:44:01 (41312): Guest Log: 2.6.3.0 1566 0 32044 151645 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 03:44:02 (41312): Guest Log: copied the webapp to /var/www
2025-10-13 03:44:02 (41312): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-13 03:44:02 (41312): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-13 03:44:02 (41312): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 03:44:02 (41312): Guest Log:  *** Starting ATLAS job. (PandaID=6840713509 taskID=46676269) ***
2025-10-13 05:22:34 (41312): Status Report: Elapsed Time: '6000.000000'
2025-10-13 05:22:34 (41312): Status Report: CPU Time: '14931.578125'
2025-10-13 06:52:24 (41312): Guest Log:  *** Job finished ***
2025-10-13 06:52:24 (41312): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:03,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:03,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:08,015 | INFO     | [monitor] cgroup control has ended
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:10,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810696050496)>', '<ExcThread(monitor, started 139809884456704)>']
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:10,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:10,541 | INFO     | [monitor] control thread has ended
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,129 | INFO     | all workflow threads have been joined
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,129 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,129 | INFO     | traces error code: 0
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,222 [wrapper] ==== pilot stdout END ====
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,229 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,234 [wrapper] pilotpid: 5950
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:15,240 [wrapper] Pilot exit status: 0
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:16,438 [wrapper] pandaids: 6840713509
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:16,471 [wrapper] cleanup supervisor_pilot 10177 5951
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:16,479 [wrapper] Test setup, not cleaning
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:16,486 [wrapper] apfmon messages muted
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:16,492 [wrapper] ==== wrapper stdout END ====
2025-10-13 06:52:24 (41312): Guest Log: 2025-10-13 05:52:16,498 [wrapper] ==== wrapper stderr END ====
2025-10-13 06:52:24 (41312): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 06:52:24 (41312): Guest Log:     "exeErrorCode": 0,
2025-10-13 06:52:24 (41312): Guest Log:     "exeErrorDiag": "",
2025-10-13 06:52:24 (41312): Guest Log:     "pilotErrorCode": 0,
2025-10-13 06:52:24 (41312): Guest Log:     "pilotErrorDiag": "",
2025-10-13 06:52:24 (41312): Guest Log:  *** Listing of results directory ***
2025-10-13 06:52:24 (41312): Guest Log: total 191880
2025-10-13 06:52:24 (41312): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 19:28 pilot3.tar.gz
2025-10-13 06:52:24 (41312): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 19:43 queuedata.json
2025-10-13 06:52:24 (41312): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 19:43 runpilot2-wrapper.sh
2025-10-13 06:52:24 (41312): Guest Log: -rwxr-xr-x. 1 atlas atlas      8483 Oct 13 02:43 init_data.xml
2025-10-13 06:52:24 (41312): Guest Log: -rwxr-xr-x. 1 atlas atlas    569678 Oct 13 02:43 input.tar.gz
2025-10-13 06:52:24 (41312): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 02:43 start_atlas.sh
2025-10-13 06:52:24 (41312): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 02:43 EVNT.46676267._004468.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 06:52:24 (41312): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Oct 13 02:43 pandaJob.out
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas    974373 Oct 13 02:44 agis_schedconf.cvmfs.json
2025-10-13 06:52:24 (41312): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 02:44 pilot3
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas 188964819 Oct 13 05:50 HITS.46676269._087831.pool.root.1
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas      1025 Oct 13 05:51 memory_monitor_summary.json
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 05:51 agis_ddmendpoints.agis.ALL.json
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas    324085 Oct 13 05:51 log.46676269._087831.job.log.tgz.1
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas      7786 Oct 13 05:51 heartbeat.json
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 05:52 pilot_heartbeat.json
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 13 05:52 pilotlog.txt
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas   1521481 Oct 13 05:52 log.46676269._087831.job.log.1
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 05:52 output.list
2025-10-13 06:52:24 (41312): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 05:52 runtime_log
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas   1863680 Oct 13 05:52 result.tar.gz
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas       668 Oct 13 05:52 wp8NDmo9GS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9qUMDm6fP1tn.diag
2025-10-13 06:52:24 (41312): Guest Log: -rw-r--r--. 1 atlas atlas      8673 Oct 13 05:52 runtime_log.err
2025-10-13 06:52:24 (41312): Guest Log: Looking for outputfile HITS.46676269._087831.pool.root.1
2025-10-13 06:52:24 (41312): Guest Log: HITS file was successfully produced
2025-10-13 06:52:24 (41312): Guest Log: -rw-------. 1 atlas atlas 188964819 Oct 13 05:50 /home/atlas/RunAtlas/HITS.46676269._087831.pool.root.1
2025-10-13 06:52:25 (41312): Guest Log: Successfully finished the ATLAS job!
2025-10-13 06:52:25 (41312): Guest Log: Copying the results back to the shared directory!
2025-10-13 06:52:25 (41312): Guest Log:  *** Contents of shared directory: ***
2025-10-13 06:52:25 (41312): Guest Log: total 401996
2025-10-13 06:52:25 (41312): Guest Log: -rwxrwxrwx. 1 root root 220212047 Oct 13 02:42 ATLAS.root_0
2025-10-13 06:52:25 (41312): Guest Log: -rwxrwxrwx. 1 root root 188964819 Oct 13  2025 HITS.pool.root.1
2025-10-13 06:52:25 (41312): Guest Log: -rwxrwxrwx. 1 root root      8483 Oct 13 02:42 init_data.xml
2025-10-13 06:52:25 (41312): Guest Log: -rwxrwxrwx. 1 root root    569678 Oct 12 23:34 input.tar.gz
2025-10-13 06:52:25 (41312): Guest Log: -rwxrwxrwx. 1 root root   1863680 Oct 13  2025 result.tar.gz
2025-10-13 06:52:25 (41312): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 23:34 start_atlas.sh
2025-10-13 06:52:25 (41312): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 06:52:25 (41312): VM Completion File Detected.
2025-10-13 06:52:25 (41312): Powering off VM.
2025-10-13 06:52:26 (41312): Successfully stopped VM.
2025-10-13 06:52:26 (41312): Deregistering VM. (boinc_e48f11f152a190db, slot#3)
2025-10-13 06:52:26 (41312): Removing network bandwidth throttle group from VM.
2025-10-13 06:52:27 (41312): Removing VM from VirtualBox.
2025-10-13 06:52:32 (41312): called boinc_finish(0)

</stderr_txt>
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