Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:47:33 (10084): wrapper (7.7.26015): starting
19:47:33 (10084): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:47:33] Arguments: --nthreads 8
[2025-10-12 19:47:33] Threads: 8
[2025-10-12 19:47:33] Checking for CVMFS
[2025-10-12 19:47:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:47:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:47:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:47:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:47:33] 2.11.2.0 10718 53590 122840 151641 3 57 13066189 18432001 1833 130560 0 48371334 99.975 2288598 37467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:47:33] CVMFS is ok
[2025-10-12 19:47:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:47:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:47:33] Further information can be found at the LHC@home message board.
[2025-10-12 19:47:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:47:33] Checking for apptainer binary...
[2025-10-12 19:47:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:47:33] Running /usr/bin/apptainer --version
[2025-10-12 19:47:33] apptainer version 1.3.2-1.el7
[2025-10-12 19:47:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:47:34] c-206-2.aglt2.org
[2025-10-12 19:47:34] apptainer works
[2025-10-12 19:47:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:47:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:47:34] Starting ATLAS job with PandaID=6840714490
[2025-10-12 19:47:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:52:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:52:09] 2025-10-13 02:51:29,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:52:09] 2025-10-13 02:51:29,640 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:52:09] 2025-10-13 02:51:29,640 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,642 | INFO     | sum of deviations: 2313233764.999996
[2025-10-12 22:52:09] 2025-10-13 02:51:29,642 | INFO     | mean x: 1760318381.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,642 | INFO     | mean y: 2472428.574585635
[2025-10-12 22:52:09] 2025-10-13 02:51:29,642 | INFO     | -- intersect: -2212201814.292426
[2025-10-12 22:52:09] 2025-10-13 02:51:29,642 | INFO     | intersect: -2212201814.292426
[2025-10-12 22:52:09] 2025-10-13 02:51:29,643 | INFO     | chi2: 2.175960078279883
[2025-10-12 22:52:09] 2025-10-13 02:51:29,643 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,645 | INFO     | sum of deviations: 13975322650.000002
[2025-10-12 22:52:09] 2025-10-13 02:51:29,645 | INFO     | mean x: 1760318228.5
[2025-10-12 22:52:09] 2025-10-13 02:51:29,645 | INFO     | mean y: 2484154.4431818184
[2025-10-12 22:52:09] 2025-10-13 02:51:29,645 | INFO     | -- intersect: -14550451953.742863
[2025-10-12 22:52:09] 2025-10-13 02:51:29,645 | INFO     | intersect: -14550451953.742863
[2025-10-12 22:52:09] 2025-10-13 02:51:29,646 | INFO     | chi2: 1.4096105561314136
[2025-10-12 22:52:09] 2025-10-13 02:51:29,646 | INFO     | current chi2=1.4096105561314136 (change=35.218914620633846 %)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,647 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,648 | INFO     | sum of deviations: 13524648184.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,648 | INFO     | mean x: 1760318076.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,648 | INFO     | mean y: 2483663.4795321636
[2025-10-12 22:52:09] 2025-10-13 02:51:29,648 | INFO     | -- intersect: -15353060895.44426
[2025-10-12 22:52:09] 2025-10-13 02:51:29,649 | INFO     | intersect: -15353060895.44426
[2025-10-12 22:52:09] 2025-10-13 02:51:29,649 | INFO     | chi2: 1.410732779953845
[2025-10-12 22:52:09] 2025-10-13 02:51:29,649 | INFO     | current chi2=1.410732779953845 (change=-0.0796123310477466 %)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,649 | INFO     | right removable region: 170
[2025-10-12 22:52:09] 2025-10-13 02:51:29,650 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,651 | INFO     | sum of deviations: -23007518199.5
[2025-10-12 22:52:09] 2025-10-13 02:51:29,652 | INFO     | mean x: 1760318533.5
[2025-10-12 22:52:09] 2025-10-13 02:51:29,652 | INFO     | mean y: 2498131.971590909
[2025-10-12 22:52:09] 2025-10-13 02:51:29,652 | INFO     | -- intersect: 23960943225.813393
[2025-10-12 22:52:09] 2025-10-13 02:51:29,652 | INFO     | intersect: 23960943225.813393
[2025-10-12 22:52:09] 2025-10-13 02:51:29,653 | INFO     | chi2: 0.8449955779289797
[2025-10-12 22:52:09] 2025-10-13 02:51:29,653 | INFO     | current chi2=0.8449955779289797 (change=61.16677018279872 %)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,653 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,655 | INFO     | sum of deviations: -19130748752.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,655 | INFO     | mean x: 1760318686.0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,655 | INFO     | mean y: 2493863.1228070175
[2025-10-12 22:52:09] 2025-10-13 02:51:29,655 | INFO     | -- intersect: 21723071190.35054
[2025-10-12 22:52:09] 2025-10-13 02:51:29,655 | INFO     | intersect: 21723071190.35054
[2025-10-12 22:52:09] 2025-10-13 02:51:29,656 | INFO     | chi2: 0.8264399916082777
[2025-10-12 22:52:09] 2025-10-13 02:51:29,656 | INFO     | current chi2=0.8264399916082777 (change=2.1959388670625137 %)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,656 | INFO     | left removable region: 20
[2025-10-12 22:52:09] 2025-10-13 02:51:29,656 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 22:52:09] 2025-10-13 02:51:29,658 | INFO     | sum of deviations: -1675041516.9999998
[2025-10-12 22:52:09] 2025-10-13 02:51:29,658 | INFO     | mean x: 1760318655.5
[2025-10-12 22:52:09] 2025-10-13 02:51:29,658 | INFO     | mean y: 2499536.2266666666
[2025-10-12 22:52:09] 2025-10-13 02:51:29,658 | INFO     | -- intersect: 2820129574.6314263
[2025-10-12 22:52:09] 2025-10-13 02:51:29,658 | INFO     | intersect: 2820129574.6314263
[2025-10-12 22:52:09] 2025-10-13 02:51:29,659 | INFO     | chi2: 0.013071118401491274
[2025-10-12 22:52:09] 2025-10-13 02:51:29,659 | INFO     | -- intersect: 2820129574.6314263
[2025-10-12 22:52:09] 2025-10-13 02:51:29,659 | INFO     | current memory leak: -1.60 B/s (using 150 data points, chi2=0.01)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,659 | INFO     | could have reported an average CPU frequency of 2558 MHz (9 samples)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | ..............................
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . Timing measurements:
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . get job = 0 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . initial setup = 2 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . payload setup = 5 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . stage-in = 0 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . payload execution = 10993 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . stage-out = 2 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | . log creation = 0 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,660 | INFO     | ..............................
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | 
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | job summary report
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | --------------------------------------------------
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | PanDA job id: 6840714490
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | task id: 46676269
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | errors: (none)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | pilot state: finished 
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | transexitcode: 0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | exeerrorcode: 0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | exeerrordiag: 
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | exitcode: 0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | exitmsg: OK
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | cpuconsumptiontime: 83575 s
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | nevents: 400
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | neventsw: 0
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | pid: 21189
[2025-10-12 22:52:09] 2025-10-13 02:51:29,746 | INFO     | pgrp: 21189
[2025-10-12 22:52:09] 2025-10-13 02:51:29,747 | INFO     | corecount: 8
[2025-10-12 22:52:09] 2025-10-13 02:51:29,747 | INFO     | event service: False
[2025-10-12 22:52:09] 2025-10-13 02:51:29,747 | INFO     | sizes: {0: 2348743, 1: 2348885, 4: 2349147, 12: 2349175, 11002: 2378160, 11005: 2387342, 11009: 2387544}
[2025-10-12 22:52:09] 2025-10-13 02:51:29,747 | INFO     | --------------------------------------------------
[2025-10-12 22:52:09] 2025-10-13 02:51:29,747 | INFO     | 
[2025-10-12 22:52:09] 2025-10-13 02:51:29,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:52:09] 2025-10-13 02:51:29,766 | INFO     | job 6840714490 has completed (purged errors)
[2025-10-12 22:52:09] 2025-10-13 02:51:29,766 | INFO     | overall cleanup function is called
[2025-10-12 22:52:09] 2025-10-13 02:51:30,773 | INFO     | --- collectZombieJob: --- 10, [21189]
[2025-10-12 22:52:09] 2025-10-13 02:51:30,773 | INFO     | zombie collector waiting for pid 21189
[2025-10-12 22:52:09] 2025-10-13 02:51:30,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:52:09] 2025-10-13 02:51:30,773 | INFO     | collected zombie processes
[2025-10-12 22:52:09] 2025-10-13 02:51:30,774 | INFO     | will attempt to kill all subprocesses of pid=21189
[2025-10-12 22:52:09] 2025-10-13 02:51:30,937 | INFO     | process IDs to be killed: [21189] (in reverse order)
[2025-10-12 22:52:09] 2025-10-13 02:51:30,996 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:52:09] 2025-10-13 02:51:30,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:52:09] 2025-10-13 02:51:30,999 | INFO     | did not find any defunct processes belonging to 21189
[2025-10-12 22:52:09] 2025-10-13 02:51:31,001 | INFO     | did not find any defunct processes belonging to 21189
[2025-10-12 22:52:09] 2025-10-13 02:51:31,001 | INFO     | ready for new job
[2025-10-12 22:52:09] 2025-10-13 02:51:31,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:52:09] 2025-10-13 02:51:31,003 | INFO     | ***************************************
[2025-10-12 22:52:09] 2025-10-13 02:51:31,003 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:52:09] 2025-10-13 02:51:31,003 | INFO     | ***************************************
[2025-10-12 22:52:09] 2025-10-13 02:51:31,003 | INFO     | 
[2025-10-12 22:52:09] 2025-10-13 02:51:31,004 | INFO     | architecture information:
[2025-10-12 22:52:09] 2025-10-13 02:51:31,004 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:52:09] 2025-10-13 02:51:31,014 | INFO     | cat /etc/os-release:
[2025-10-12 22:52:09] NAME="CentOS Linux"
[2025-10-12 22:52:09] VERSION="7 (Core)"
[2025-10-12 22:52:09] ID="centos"
[2025-10-12 22:52:09] ID_LIKE="rhel fedora"
[2025-10-12 22:52:09] VERSION_ID="7"
[2025-10-12 22:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:52:09] ANSI_COLOR="0;31"
[2025-10-12 22:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:52:09] HOME_URL="https://www.centos.org/"
[2025-10-12 22:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:52:09] 
[2025-10-12 22:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:52:09] 
[2025-10-12 22:52:09] 2025-10-13 02:51:31,014 | INFO     | ***************************************
[2025-10-12 22:52:09] 2025-10-13 02:51:31,517 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:52:09] 2025-10-13 02:51:31,532 | INFO     | sufficient remaining disk space (27923578880 B)
[2025-10-12 22:52:09] 2025-10-13 02:51:31,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:52:09] 2025-10-13 02:51:31,532 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:52:09] 2025-10-13 02:51:31,533 | INFO     | update_server=False
[2025-10-12 22:52:09] 2025-10-13 02:51:31,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:52:09] 2025-10-13 02:51:31,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:52:09] 2025-10-13 02:51:31,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:52:09] 2025-10-13 02:51:31,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:52:09] 2025-10-13 02:51:31,869 | INFO     | all data control threads have been joined
[2025-10-12 22:52:09] 2025-10-13 02:51:32,002 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:52:09] 2025-10-13 02:51:32,002 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:52:09] 2025-10-13 02:51:32,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:52:09] 2025-10-13 02:51:32,002 | INFO     | will abort loop
[2025-10-12 22:52:09] 2025-10-13 02:51:32,371 | INFO     | all job control threads have been joined
[2025-10-12 22:52:09] 2025-10-13 02:51:32,390 | INFO     | all payload control threads have been joined
[2025-10-12 22:52:09] 2025-10-13 02:51:32,538 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,539 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,659 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,874 | INFO     | [data] control thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,926 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,933 | INFO     | [job] validate thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,939 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:32,959 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:33,008 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:33,376 | INFO     | [job] control thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:33,395 | INFO     | [payload] control thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:33,435 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:33,540 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:33,900 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:51:35,748 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:52:09] 2025-10-13 02:52:01,492 | INFO     | PID=13770 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:52:09] 2025-10-13 02:52:01,492 | INFO     | .. there are 3 such processes running
[2025-10-12 22:52:09] 2025-10-13 02:52:01,493 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:52:09] 2025-10-13 02:52:01,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:52:09] 2025-10-13 02:52:01,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:52:09] 2025-10-13 02:52:02,903 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:52:09] 2025-10-13 02:52:03,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666221942592)>', '<ExcThread(monitor, started 140665790908160)>']
[2025-10-12 22:52:09] 2025-10-13 02:52:04,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:52:09] 2025-10-13 02:52:04,509 | INFO     | [monitor] control thread has ended
[2025-10-12 22:52:09] 2025-10-13 02:52:08,699 | INFO     | all workflow threads have been joined
[2025-10-12 22:52:09] 2025-10-13 02:52:08,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:52:09] 2025-10-13 02:52:08,700 | INFO     | traces error code: 0
[2025-10-12 22:52:09] 2025-10-13 02:52:08,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:52:09] 2025-10-13 02:52:08,834 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:52:09] 2025-10-13 02:52:08,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:52:09] 2025-10-13 02:52:08,839 [wrapper] pilotpid: 13770
[2025-10-12 22:52:09] 2025-10-13 02:52:08,841 [wrapper] Pilot exit status: 0
[2025-10-12 22:52:09] 2025-10-13 02:52:08,849 [wrapper] pandaids: 6840714490
[2025-10-12 22:52:09] 2025-10-13 02:52:08,885 [wrapper] cleanup supervisor_pilot 10513 13771
[2025-10-12 22:52:09] 2025-10-13 02:52:08,887 [wrapper] Test setup, not cleaning
[2025-10-12 22:52:09] 2025-10-13 02:52:08,894 [wrapper] apfmon messages muted
[2025-10-12 22:52:09] 2025-10-13 02:52:08,896 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:52:09] 2025-10-13 02:52:08,898 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:52:09]  *** Error codes and diagnostics ***
[2025-10-12 22:52:09]     "exeErrorCode": 0,
[2025-10-12 22:52:09]     "exeErrorDiag": "",
[2025-10-12 22:52:09]     "pilotErrorCode": 0,
[2025-10-12 22:52:09]     "pilotErrorDiag": "",
[2025-10-12 22:52:09]  *** Listing of results directory ***
[2025-10-12 22:52:09] total 413176
[2025-10-12 22:52:09] -rwx------ 1 boincer umatlas     36292 Oct 12 15:50 runpilot2-wrapper.sh
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:50 queuedata.json
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:52:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:47 run_atlas
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:47 job.xml
[2025-10-12 22:52:09] -rw-r--r-- 2 boincer umatlas 219096256 Oct 12 19:47 EVNT.46676267._004470.pool.root.1
[2025-10-12 22:52:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:47 start_atlas.sh
[2025-10-12 22:52:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:47 shared
[2025-10-12 22:52:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 19:47 input.tar.gz
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:47 boinc_lockfile
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:47 pandaJob.out
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas    975603 Oct 12 19:47 agis_schedconf.cvmfs.json
[2025-10-12 22:52:09] drwx------ 5 boincer umatlas      4096 Oct 12 19:47 pilot3
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 22:48 init_data.xml
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas 196182006 Oct 12 22:50 HITS.46676269._087886.pool.root.1
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas       530 Oct 12 22:51 boinc_task_state.xml
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas      1054 Oct 12 22:51 memory_monitor_summary.json
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas   1560580 Oct 12 22:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas    409673 Oct 12 22:51 log.46676269._087886.job.log.tgz.1
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas      7855 Oct 12 22:51 heartbeat.json
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:51 boinc_mmap_file
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas        28 Oct 12 22:51 wrapper_checkpoint.txt
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas        95 Oct 12 22:52 pilot_heartbeat.json
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas      5007 Oct 12 22:52 pilotlog.txt
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas   1543861 Oct 12 22:52 log.46676269._087886.job.log.1
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas       357 Oct 12 22:52 output.list
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:52 runtime_log
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas   1976320 Oct 12 22:52 result.tar.gz
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 22:52 runtime_log.err
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas       661 Oct 12 22:52 5VrMDm4FHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhLlNDmnsCH2m.diag
[2025-10-12 22:52:09] -rw-r--r-- 1 boincer umatlas     20889 Oct 12 22:52 stderr.txt
[2025-10-12 22:52:09] HITS file was successfully produced:
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas 196182006 Oct 12 22:50 shared/HITS.pool.root.1
[2025-10-12 22:52:09]  *** Contents of shared directory: ***
[2025-10-12 22:52:09] total 408060
[2025-10-12 22:52:09] -rw-r--r-- 2 boincer umatlas 219096256 Oct 12 19:47 ATLAS.root_0
[2025-10-12 22:52:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:47 start_atlas.sh
[2025-10-12 22:52:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 19:47 input.tar.gz
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas 196182006 Oct 12 22:50 HITS.pool.root.1
[2025-10-12 22:52:09] -rw------- 1 boincer umatlas   1976320 Oct 12 22:52 result.tar.gz
22:52:10 (10084): run_atlas exited; CPU time 83679.950688
22:52:10 (10084): called boinc_finish(0)

</stderr_txt>
]]>

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