Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:30 (2023424): wrapper (7.7.26015): starting
11:53:30 (2023424): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 11:53:30] Arguments: --nthreads 3
[2025-10-13 11:53:30] Threads: 3
[2025-10-13 11:53:30] Checking for CVMFS
[2025-10-13 11:53:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:53:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:53:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:53:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:53:30] 2.9.2.0 420922 5421 83204 151656 2 57 24380011 36864001 0 130560 0 4235856 99.991 190649 814 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:53:30] CVMFS is ok
[2025-10-13 11:53:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:53:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:53:30] Further information can be found at the LHC@home message board.
[2025-10-13 11:53:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:53:30] Checking for apptainer binary...
[2025-10-13 11:53:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:53:30] Running /usr/bin/apptainer --version
[2025-10-13 11:53:30] apptainer version 1.4.1-1.1
[2025-10-13 11:53:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:53:30] atlasA214
[2025-10-13 11:53:30] apptainer works
[2025-10-13 11:53:30] Set ATHENA_PROC_NUMBER=3
[2025-10-13 11:53:30] Set ATHENA_CORE_NUMBER=3
[2025-10-13 11:53:30] Starting ATLAS job with PandaID=6840713273
[2025-10-13 11:53:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:23:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:23:02]  workdir=None
[2025-10-13 13:23:02] ]
[2025-10-13 13:23:02] 2025-10-13 11:22:20,839 | INFO     | transferring file log.46676269._087595.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840713273/log.46676269._087595.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 13:23:02] 2025-10-13 11:22:20,839 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840713273/log.46676269._087595.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0875
[2025-10-13 13:23:02] 2025-10-13 11:22:20,852 | INFO     | adding to output.list: log.46676269._087595.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/aa/log.46676269._087595.job.log.tg
[2025-10-13 13:23:02] 2025-10-13 11:22:20,852 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 13:23:02] 2025-10-13 11:22:20,852 | INFO     | summary of transferred files:
[2025-10-13 13:23:02] 2025-10-13 11:22:20,852 | INFO     |  -- lfn=log.46676269._087595.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 13:23:02] 2025-10-13 11:22:20,852 | INFO     | stage-out finished correctly
[2025-10-13 13:23:02] 2025-10-13 11:22:20,882 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 13:23:02] 2025-10-13 11:22:21,409 | WARNING  | process 2033577 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 13:23:02] 2025-10-13 11:22:21,409 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840713273/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:23:02] 2025-10-13 11:22:21,433 | INFO     | job 6840713273 has state=finished
[2025-10-13 13:23:02] 2025-10-13 11:22:21,433 | INFO     | preparing for final server update for job 6840713273 in state='finished'
[2025-10-13 13:23:02] 2025-10-13 11:22:21,451 | INFO     | number of running child processes to parent process 2033577: 1
[2025-10-13 13:23:02] 2025-10-13 11:22:21,451 | INFO     | maximum number of monitored processes: 6
[2025-10-13 13:23:02] 2025-10-13 11:22:21,589 | INFO     | time since job start (5325s) is within the limit (172800.0s)
[2025-10-13 13:23:02] 2025-10-13 11:22:22,010 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 13:23:02] 2025-10-13 11:22:22,011 | INFO     | this job has now completed (state=finished)
[2025-10-13 13:23:02] 2025-10-13 11:22:22,011 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 13:23:02] 2025-10-13 11:22:22,011 | INFO     | log transfer has been attempted: DONE
[2025-10-13 13:23:02] 2025-10-13 11:22:22,011 | INFO     | job 6840713273 has finished - writing final server update
[2025-10-13 13:23:02] 2025-10-13 11:22:22,011 | INFO     | total number of processed events: 400 (read)
[2025-10-13 13:23:02] 2025-10-13 11:22:22,012 | INFO     | executing command: lscpu
[2025-10-13 13:23:02] 2025-10-13 11:22:22,027 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 13:23:02] 2025-10-13 11:22:23,595 | INFO     | time since job start (5327s) is within the limit (172800.0s)
[2025-10-13 13:23:02] 2025-10-13 11:22:23,955 | INFO     | monitor loop #409: job 0:6840713273 is in state 'finished'
[2025-10-13 13:23:02] 2025-10-13 11:22:23,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:23:02] 2025-10-13 11:22:25,601 | INFO     | time since job start (5329s) is within the limit (172800.0s)
[2025-10-13 13:23:02] 2025-10-13 11:22:26,458 | INFO     | monitor loop #410: job 0:6840713273 is in state 'finished'
[2025-10-13 13:23:02] 2025-10-13 11:22:26,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:23:02] 2025-10-13 11:22:26,660 | INFO     | PID=2027138 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:23:02] 2025-10-13 11:22:27,660 | INFO     | time since job start (5331s) is within the limit (172800.0s)
[2025-10-13 13:23:02] 2025-10-13 11:22:28,961 | INFO     | monitor loop #411: job 0:6840713273 is in state 'finished'
[2025-10-13 13:23:02] 2025-10-13 11:22:28,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:23:02] 2025-10-13 11:22:29,666 | INFO     | time since job start (5333s) is within the limit (172800.0s)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,104 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:23:02] 2025-10-13 11:22:30,105 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3654.9478333333336
[2025-10-13 13:23:02] 2025-10-13 11:22:30,106 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840713273/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,106 | INFO     | extracted standard info from prmon json
[2025-10-13 13:23:02] 2025-10-13 11:22:30,106 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:23:02] 2025-10-13 11:22:30,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:23:02] 2025-10-13 11:22:30,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:23:02] 2025-10-13 11:22:30,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | sum of square deviations: 158737860.0
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | sum of deviations: -6441166076.5
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | mean x: 1760351949.5
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | mean y: 2404498.2625
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | -- intersect: 71432870171.79521
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | intersect: 71432870171.79521
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | chi2: 0.14009676756682599
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | -- intersect: 71432870171.79521
[2025-10-13 13:23:02] 2025-10-13 11:22:30,107 | INFO     | current memory leak: -40.58 B/s (using 80 data points, chi2=0.14)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | could have reported an average CPU frequency of 3845 MHz (6 samples)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | ..............................
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . Timing measurements:
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . get job = 0 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . initial setup = 1 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . payload setup = 2 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . stage-in = 0 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . payload execution = 5305 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . stage-out = 0 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | . log creation = 0 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,108 | INFO     | ..............................
[2025-10-13 13:23:02] 2025-10-13 11:22:30,586 | INFO     | 
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | job summary report
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | --------------------------------------------------
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | PanDA job id: 6840713273
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | task id: 46676269
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | errors: (none)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | pilot state: finished 
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | transexitcode: 0
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | exeerrorcode: 0
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | exeerrordiag: 
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | exitcode: 0
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | exitmsg: OK
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | cpuconsumptiontime: 15357 s
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | nevents: 400
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | neventsw: 0
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | pid: 2033577
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | pgrp: 2033577
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | corecount: 3
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | event service: False
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 5311: 2375829, 5312: 2384889, 5321: 2385027}
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | --------------------------------------------------
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | 
[2025-10-13 13:23:02] 2025-10-13 11:22:30,587 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | job 6840713273 has completed (purged errors)
[2025-10-13 13:23:02] 2025-10-13 11:22:30,602 | INFO     | overall cleanup function is called
[2025-10-13 13:23:02] 2025-10-13 11:22:31,609 | INFO     | --- collectZombieJob: --- 10, [2033577]
[2025-10-13 13:23:02] 2025-10-13 11:22:31,609 | INFO     | zombie collector waiting for pid 2033577
[2025-10-13 13:23:02] 2025-10-13 11:22:31,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:23:02] 2025-10-13 11:22:31,609 | INFO     | collected zombie processes
[2025-10-13 13:23:02] 2025-10-13 11:22:31,610 | INFO     | will attempt to kill all subprocesses of pid=2033577
[2025-10-13 13:23:02] 2025-10-13 11:22:31,652 | INFO     | process IDs to be killed: [2033577] (in reverse order)
[2025-10-13 13:23:02] 2025-10-13 11:22:31,676 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:23:02] 2025-10-13 11:22:31,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:23:02] 2025-10-13 11:22:31,677 | INFO     | did not find any defunct processes belonging to 2033577
[2025-10-13 13:23:02] 2025-10-13 11:22:31,678 | INFO     | did not find any defunct processes belonging to 2033577
[2025-10-13 13:23:02] 2025-10-13 11:22:31,678 | INFO     | ready for new job
[2025-10-13 13:23:02] 2025-10-13 11:22:31,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:23:02] 2025-10-13 11:22:31,679 | INFO     | ***************************************
[2025-10-13 13:23:02] 2025-10-13 11:22:31,679 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:23:02] 2025-10-13 11:22:31,679 | INFO     | ***************************************
[2025-10-13 13:23:02] 2025-10-13 11:22:31,679 | INFO     | 
[2025-10-13 13:23:02] 2025-10-13 11:22:31,679 | INFO     | architecture information:
[2025-10-13 13:23:02] 2025-10-13 11:22:31,679 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:23:02] 2025-10-13 11:22:31,688 | INFO     | cat /etc/os-release:
[2025-10-13 13:23:02] NAME="CentOS Linux"
[2025-10-13 13:23:02] VERSION="7 (Core)"
[2025-10-13 13:23:02] ID="centos"
[2025-10-13 13:23:02] ID_LIKE="rhel fedora"
[2025-10-13 13:23:02] VERSION_ID="7"
[2025-10-13 13:23:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:23:02] ANSI_COLOR="0;31"
[2025-10-13 13:23:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:23:02] HOME_URL="https://www.centos.org/"
[2025-10-13 13:23:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:23:02] 
[2025-10-13 13:23:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:23:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:23:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:23:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:23:02] 
[2025-10-13 13:23:02] 2025-10-13 11:22:31,688 | INFO     | ***************************************
[2025-10-13 13:23:02] 2025-10-13 11:22:32,191 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 13:23:02] 2025-10-13 11:22:32,202 | INFO     | sufficient remaining disk space (235449352192 B)
[2025-10-13 13:23:02] 2025-10-13 11:22:32,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:23:02] 2025-10-13 11:22:32,203 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:23:02] 2025-10-13 11:22:32,203 | INFO     | update_server=False
[2025-10-13 13:23:02] 2025-10-13 11:22:32,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:23:02] 2025-10-13 11:22:32,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:23:02] 2025-10-13 11:22:32,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:23:02] 2025-10-13 11:22:32,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:23:02] 2025-10-13 11:22:32,471 | INFO     | aborting loop
[2025-10-13 13:23:02] 2025-10-13 11:22:32,805 | INFO     | all job control threads have been joined
[2025-10-13 13:23:02] 2025-10-13 11:22:33,208 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:33,236 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:33,289 | INFO     | all data control threads have been joined
[2025-10-13 13:23:02] 2025-10-13 11:22:33,396 | INFO     | all payload control threads have been joined
[2025-10-13 13:23:02] 2025-10-13 11:22:33,477 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:33,526 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:33,572 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:33,811 | INFO     | [job] control thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,072 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,209 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,295 | INFO     | [data] control thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,355 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,402 | INFO     | [payload] control thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,628 | INFO     | [job] validate thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:34,703 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:35,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:23:02] 2025-10-13 11:22:36,156 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:36,210 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:41,769 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:23:02] 2025-10-13 11:22:42,647 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:23:02] 2025-10-13 11:22:43,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:23:02] 2025-10-13 11:22:44,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165179283264)>', '<ExcThread(monitor, started 140164311545600)>']
[2025-10-13 13:23:02] 2025-10-13 11:22:49,982 | INFO     | all workflow threads have been joined
[2025-10-13 13:23:02] 2025-10-13 11:22:49,982 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:23:02] 2025-10-13 11:22:49,982 | INFO     | traces error code: 0
[2025-10-13 13:23:02] 2025-10-13 11:22:49,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:23:02] 2025-10-13 11:23:02,782 | INFO     | PID=2027138 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:23:02] 2025-10-13 11:23:02,782 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:23:02] 2025-10-13 11:23:02,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:23:02] 2025-10-13 11:23:02,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:23:02] 2025-10-13 11:23:02,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:23:02] 2025-10-13 11:23:02,782 | INFO     | [monitor] control thread has ended
[2025-10-13 13:23:02] 2025-10-13 11:23:02,828 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:23:02] 2025-10-13 11:23:02,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:23:02] 2025-10-13 11:23:02,833 [wrapper] pilotpid: 2027138
[2025-10-13 13:23:02] 2025-10-13 11:23:02,836 [wrapper] Pilot exit status: 0
[2025-10-13 13:23:02] 2025-10-13 11:23:02,843 [wrapper] pandaids: 6840713273
[2025-10-13 13:23:02] 2025-10-13 11:23:02,858 [wrapper] cleanup supervisor_pilot 2045580 2027139
[2025-10-13 13:23:02] 2025-10-13 11:23:02,860 [wrapper] Test setup, not cleaning
[2025-10-13 13:23:02] 2025-10-13 11:23:02,863 [wrapper] apfmon messages muted
[2025-10-13 13:23:02] 2025-10-13 11:23:02,865 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:23:02] 2025-10-13 11:23:02,867 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:23:02]  *** Error codes and diagnostics ***
[2025-10-13 13:23:02]     "exeErrorCode": 0,
[2025-10-13 13:23:02]     "exeErrorDiag": "",
[2025-10-13 13:23:02]     "pilotErrorCode": 0,
[2025-10-13 13:23:02]     "pilotErrorDiag": "",
[2025-10-13 13:23:02]  *** Listing of results directory ***
[2025-10-13 13:23:02] total 415292
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:35 queuedata.json
[2025-10-13 13:23:02] -rwx------ 1 boinc boinc     36292 Oct 12 21:35 runpilot2-wrapper.sh
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:23:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:53 run_atlas
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:53 job.xml
[2025-10-13 13:23:02] -rw-r--r-- 2 boinc boinc 218433266 Oct 13 11:53 EVNT.46676267._004458.pool.root.1
[2025-10-13 13:23:02] -rw-r--r-- 2 boinc boinc    569682 Oct 13 11:53 input.tar.gz
[2025-10-13 13:23:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:53 start_atlas.sh
[2025-10-13 13:23:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:53 shared
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:53 boinc_setup_complete
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc      6442 Oct 13 11:53 init_data.xml
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:53 boinc_lockfile
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 11:53 pandaJob.out
[2025-10-13 13:23:02] -rw------- 1 boinc boinc    972849 Oct 13 11:53 agis_schedconf.cvmfs.json
[2025-10-13 13:23:02] -rw------- 1 boinc boinc   1560580 Oct 13 11:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:23:02] drwx------ 5 boinc boinc      4096 Oct 13 11:53 pilot3
[2025-10-13 13:23:02] -rw------- 1 boinc boinc 200836242 Oct 13 13:22 HITS.46676269._087595.pool.root.1
[2025-10-13 13:23:02] -rw------- 1 boinc boinc        95 Oct 13 13:22 pilot_heartbeat.json
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:22 boinc_task_state.xml
[2025-10-13 13:23:02] -rw------- 1 boinc boinc      1018 Oct 13 13:22 memory_monitor_summary.json
[2025-10-13 13:23:02] -rw------- 1 boinc boinc    262600 Oct 13 13:22 log.46676269._087595.job.log.tgz.1
[2025-10-13 13:23:02] -rw------- 1 boinc boinc      7765 Oct 13 13:22 heartbeat.json
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:22 boinc_mmap_file
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:22 wrapper_checkpoint.txt
[2025-10-13 13:23:02] -rw------- 1 boinc boinc       747 Oct 13 13:23 pilotlog.txt
[2025-10-13 13:23:02] -rw------- 1 boinc boinc    778498 Oct 13 13:23 log.46676269._087595.job.log.1
[2025-10-13 13:23:02] -rw------- 1 boinc boinc       357 Oct 13 13:23 output.list
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:23 runtime_log
[2025-10-13 13:23:02] -rw------- 1 boinc boinc   1064960 Oct 13 13:23 result.tar.gz
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc      8792 Oct 13 13:23 runtime_log.err
[2025-10-13 13:23:02] -rw------- 1 boinc boinc       661 Oct 13 13:23 rZhKDmM2GS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9HlNDmPu3odm.diag
[2025-10-13 13:23:02] -rw-r--r-- 1 boinc boinc     22353 Oct 13 13:23 stderr.txt
[2025-10-13 13:23:02] HITS file was successfully produced:
[2025-10-13 13:23:02] -rw------- 1 boinc boinc 200836242 Oct 13 13:22 shared/HITS.pool.root.1
[2025-10-13 13:23:02]  *** Contents of shared directory: ***
[2025-10-13 13:23:02] total 411072
[2025-10-13 13:23:02] -rw-r--r-- 2 boinc boinc 218433266 Oct 13 11:53 ATLAS.root_0
[2025-10-13 13:23:02] -rw-r--r-- 2 boinc boinc    569682 Oct 13 11:53 input.tar.gz
[2025-10-13 13:23:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:53 start_atlas.sh
[2025-10-13 13:23:02] -rw------- 1 boinc boinc 200836242 Oct 13 13:22 HITS.pool.root.1
[2025-10-13 13:23:02] -rw------- 1 boinc boinc   1064960 Oct 13 13:23 result.tar.gz
13:23:04 (2023424): run_atlas exited; CPU time 15376.432407
13:23:04 (2023424): called boinc_finish(0)

</stderr_txt>
]]>

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