Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:26:56 (20350): wrapper (7.7.26015): starting
19:26:56 (20350): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:26:56] Arguments: --nthreads 8
[2025-10-12 19:26:56] Threads: 8
[2025-10-12 19:26:56] Checking for CVMFS
[2025-10-12 19:26:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:26:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:26:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:26:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:26:57] 2.11.2.0 23418 12323 105532 151641 3 57 13916717 18432001 1833 130560 0 18368322 99.996 410755 34824 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:26:57] CVMFS is ok
[2025-10-12 19:26:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:26:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:26:57] Further information can be found at the LHC@home message board.
[2025-10-12 19:26:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:26:57] Checking for apptainer binary...
[2025-10-12 19:26:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:26:57] Running /usr/bin/apptainer --version
[2025-10-12 19:26:57] apptainer version 1.3.2-1.el7
[2025-10-12 19:26:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:26:57] c-206-24.aglt2.org
[2025-10-12 19:26:57] apptainer works
[2025-10-12 19:26:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:26:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:26:57] Starting ATLAS job with PandaID=6840538129
[2025-10-12 19:26:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:32:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:32:32] 2025-10-13 02:31:46,547 | INFO     | time since job start (11077s) is within the limit (172800.0s)
[2025-10-12 22:32:32] 2025-10-13 02:31:47,723 | INFO     | PID=24568 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:32:32] 2025-10-13 02:31:47,723 | INFO     | .. there are 3 such processes running
[2025-10-12 22:32:32] 2025-10-13 02:31:48,043 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:32:32] 2025-10-13 02:31:48,049 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2411.375
[2025-10-12 22:32:32] 2025-10-13 02:31:48,054 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840538129/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,055 | INFO     | extracted standard info from prmon json
[2025-10-12 22:32:32] 2025-10-13 02:31:48,055 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:32:32] 2025-10-13 02:31:48,055 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:32:32] 2025-10-13 02:31:48,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:32:32] 2025-10-13 02:31:48,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:32:32] 2025-10-13 02:31:48,061 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:32:32] 2025-10-13 02:31:48,061 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,063 | INFO     | sum of deviations: -16966147769.999998
[2025-10-12 22:32:32] 2025-10-13 02:31:48,063 | INFO     | mean x: 1760317144.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,063 | INFO     | mean y: 2529672.149171271
[2025-10-12 22:32:32] 2025-10-13 02:31:48,064 | INFO     | -- intersect: 16245792515.401876
[2025-10-12 22:32:32] 2025-10-13 02:31:48,064 | INFO     | intersect: 16245792515.401876
[2025-10-12 22:32:32] 2025-10-13 02:31:48,064 | INFO     | chi2: 1.5966876283101643
[2025-10-12 22:32:32] 2025-10-13 02:31:48,065 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,066 | INFO     | sum of deviations: -16025017596.500002
[2025-10-12 22:32:32] 2025-10-13 02:31:48,066 | INFO     | mean x: 1760316991.5
[2025-10-12 22:32:32] 2025-10-13 02:31:48,067 | INFO     | mean y: 2530641.3011363638
[2025-10-12 22:32:32] 2025-10-13 02:31:48,067 | INFO     | -- intersect: 16689865823.060368
[2025-10-12 22:32:32] 2025-10-13 02:31:48,067 | INFO     | intersect: 16689865823.060368
[2025-10-12 22:32:32] 2025-10-13 02:31:48,067 | INFO     | chi2: 1.5954401847907318
[2025-10-12 22:32:32] 2025-10-13 02:31:48,068 | INFO     | current chi2=1.5954401847907318 (change=0.07812696092301592 %)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,068 | INFO     | right removable region: 175
[2025-10-12 22:32:32] 2025-10-13 02:31:48,068 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,070 | INFO     | sum of deviations: -43561921063.50001
[2025-10-12 22:32:32] 2025-10-13 02:31:48,070 | INFO     | mean x: 1760317296.5
[2025-10-12 22:32:32] 2025-10-13 02:31:48,070 | INFO     | mean y: 2556687.1761363638
[2025-10-12 22:32:32] 2025-10-13 02:31:48,070 | INFO     | -- intersect: 45364909615.76962
[2025-10-12 22:32:32] 2025-10-13 02:31:48,070 | INFO     | intersect: 45364909615.76962
[2025-10-12 22:32:32] 2025-10-13 02:31:48,071 | INFO     | chi2: 0.1765064302338731
[2025-10-12 22:32:32] 2025-10-13 02:31:48,071 | INFO     | current chi2=0.1765064302338731 (change=88.94546265003152 %)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,071 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,073 | INFO     | sum of deviations: -41233816139.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,073 | INFO     | mean x: 1760317449.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,073 | INFO     | mean y: 2554107.2865497074
[2025-10-12 22:32:32] 2025-10-13 02:31:48,073 | INFO     | -- intersect: 46818372671.846565
[2025-10-12 22:32:32] 2025-10-13 02:31:48,074 | INFO     | intersect: 46818372671.846565
[2025-10-12 22:32:32] 2025-10-13 02:31:48,074 | INFO     | chi2: 0.16473691432765358
[2025-10-12 22:32:32] 2025-10-13 02:31:48,074 | INFO     | current chi2=0.16473691432765358 (change=6.668038037268544 %)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,074 | INFO     | left removable region: 20
[2025-10-12 22:32:32] 2025-10-13 02:31:48,075 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,076 | INFO     | sum of deviations: -29945552760.999985
[2025-10-12 22:32:32] 2025-10-13 02:31:48,076 | INFO     | mean x: 1760317571.0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,076 | INFO     | mean y: 2544108.7225806452
[2025-10-12 22:32:32] 2025-10-13 02:31:48,077 | INFO     | -- intersect: 45655396426.27424
[2025-10-12 22:32:32] 2025-10-13 02:31:48,077 | INFO     | intersect: 45655396426.27424
[2025-10-12 22:32:32] 2025-10-13 02:31:48,077 | INFO     | chi2: 0.15335438732516074
[2025-10-12 22:32:32] 2025-10-13 02:31:48,077 | INFO     | -- intersect: 45655396426.27424
[2025-10-12 22:32:32] 2025-10-13 02:31:48,078 | INFO     | current memory leak: -25.93 B/s (using 155 data points, chi2=0.15)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,078 | INFO     | could have reported an average CPU frequency of 2537 MHz (10 samples)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,078 | INFO     | ..............................
[2025-10-12 22:32:32] 2025-10-13 02:31:48,078 | INFO     | . Timing measurements:
[2025-10-12 22:32:32] 2025-10-13 02:31:48,079 | INFO     | . get job = 0 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,079 | INFO     | . initial setup = 2 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,079 | INFO     | . payload setup = 4 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,079 | INFO     | . stage-in = 0 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,079 | INFO     | . payload execution = 11044 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,079 | INFO     | . stage-out = 2 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,080 | INFO     | . log creation = 0 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,080 | INFO     | ..............................
[2025-10-12 22:32:32] 2025-10-13 02:31:48,156 | INFO     | 
[2025-10-12 22:32:32] 2025-10-13 02:31:48,157 | INFO     | job summary report
[2025-10-12 22:32:32] 2025-10-13 02:31:48,157 | INFO     | --------------------------------------------------
[2025-10-12 22:32:32] 2025-10-13 02:31:48,157 | INFO     | PanDA job id: 6840538129
[2025-10-12 22:32:32] 2025-10-13 02:31:48,157 | INFO     | task id: 46676269
[2025-10-12 22:32:32] 2025-10-13 02:31:48,157 | INFO     | errors: (none)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:32:32] 2025-10-13 02:31:48,158 | INFO     | pilot state: finished 
[2025-10-12 22:32:32] 2025-10-13 02:31:48,158 | INFO     | transexitcode: 0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,158 | INFO     | exeerrorcode: 0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,158 | INFO     | exeerrordiag: 
[2025-10-12 22:32:32] 2025-10-13 02:31:48,158 | INFO     | exitcode: 0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,158 | INFO     | exitmsg: OK
[2025-10-12 22:32:32] 2025-10-13 02:31:48,159 | INFO     | cpuconsumptiontime: 83284 s
[2025-10-12 22:32:32] 2025-10-13 02:31:48,159 | INFO     | nevents: 400
[2025-10-12 22:32:32] 2025-10-13 02:31:48,159 | INFO     | neventsw: 0
[2025-10-12 22:32:32] 2025-10-13 02:31:48,159 | INFO     | pid: 31608
[2025-10-12 22:32:32] 2025-10-13 02:31:48,159 | INFO     | pgrp: 31608
[2025-10-12 22:32:32] 2025-10-13 02:31:48,159 | INFO     | corecount: 8
[2025-10-12 22:32:32] 2025-10-13 02:31:48,160 | INFO     | event service: False
[2025-10-12 22:32:32] 2025-10-13 02:31:48,160 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 12: 2349174, 11053: 2378420, 11057: 2387418, 11058: 2387602, 11064: 2387796}
[2025-10-12 22:32:32] 2025-10-13 02:31:48,160 | INFO     | --------------------------------------------------
[2025-10-12 22:32:32] 2025-10-13 02:31:48,160 | INFO     | 
[2025-10-12 22:32:32] 2025-10-13 02:31:48,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 22:32:32] 2025-10-13 02:31:48,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:32:32] 2025-10-13 02:31:48,183 | INFO     | job 6840538129 has completed (purged errors)
[2025-10-12 22:32:32] 2025-10-13 02:31:48,184 | INFO     | overall cleanup function is called
[2025-10-12 22:32:32] 2025-10-13 02:31:49,191 | INFO     | --- collectZombieJob: --- 10, [31608]
[2025-10-12 22:32:32] 2025-10-13 02:31:49,191 | INFO     | zombie collector waiting for pid 31608
[2025-10-12 22:32:32] 2025-10-13 02:31:49,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:32:32] 2025-10-13 02:31:49,192 | INFO     | collected zombie processes
[2025-10-12 22:32:32] 2025-10-13 02:31:49,192 | INFO     | will attempt to kill all subprocesses of pid=31608
[2025-10-12 22:32:32] 2025-10-13 02:31:49,325 | INFO     | process IDs to be killed: [31608] (in reverse order)
[2025-10-12 22:32:32] 2025-10-13 02:31:49,363 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:32:32] 2025-10-13 02:31:49,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:32:32] 2025-10-13 02:31:49,366 | INFO     | did not find any defunct processes belonging to 31608
[2025-10-12 22:32:32] 2025-10-13 02:31:49,368 | INFO     | did not find any defunct processes belonging to 31608
[2025-10-12 22:32:32] 2025-10-13 02:31:49,368 | INFO     | ready for new job
[2025-10-12 22:32:32] 2025-10-13 02:31:49,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:32:32] 2025-10-13 02:31:49,370 | INFO     | ***************************************
[2025-10-12 22:32:32] 2025-10-13 02:31:49,370 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:32:32] 2025-10-13 02:31:49,370 | INFO     | ***************************************
[2025-10-12 22:32:32] 2025-10-13 02:31:49,370 | INFO     | 
[2025-10-12 22:32:32] 2025-10-13 02:31:49,371 | INFO     | architecture information:
[2025-10-12 22:32:32] 2025-10-13 02:31:49,371 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:32:32] 2025-10-13 02:31:49,385 | INFO     | cat /etc/os-release:
[2025-10-12 22:32:32] NAME="CentOS Linux"
[2025-10-12 22:32:32] VERSION="7 (Core)"
[2025-10-12 22:32:32] ID="centos"
[2025-10-12 22:32:32] ID_LIKE="rhel fedora"
[2025-10-12 22:32:32] VERSION_ID="7"
[2025-10-12 22:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:32:32] ANSI_COLOR="0;31"
[2025-10-12 22:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:32:32] HOME_URL="https://www.centos.org/"
[2025-10-12 22:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:32:32] 
[2025-10-12 22:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:32:32] 
[2025-10-12 22:32:32] 2025-10-13 02:31:49,385 | INFO     | ***************************************
[2025-10-12 22:32:32] 2025-10-13 02:31:49,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 22:32:32] 2025-10-13 02:31:49,912 | INFO     | sufficient remaining disk space (28246540288 B)
[2025-10-12 22:32:32] 2025-10-13 02:31:49,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:32:32] 2025-10-13 02:31:49,913 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:32:32] 2025-10-13 02:31:49,913 | INFO     | update_server=False
[2025-10-12 22:32:32] 2025-10-13 02:31:49,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:32:32] 2025-10-13 02:31:49,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:32:32] 2025-10-13 02:31:49,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:32:32] 2025-10-13 02:31:49,914 | INFO     | aborting loop
[2025-10-12 22:32:32] 2025-10-13 02:31:49,932 | INFO     | all job control threads have been joined
[2025-10-12 22:32:32] 2025-10-13 02:31:50,326 | INFO     | all data control threads have been joined
[2025-10-12 22:32:32] 2025-10-13 02:31:50,535 | INFO     | all payload control threads have been joined
[2025-10-12 22:32:32] 2025-10-13 02:31:50,919 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:50,920 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:50,920 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:50,937 | INFO     | [job] control thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:51,101 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:51,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:32:32] 2025-10-13 02:31:51,302 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:51,331 | INFO     | [data] control thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:51,469 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:51,541 | INFO     | [payload] control thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:52,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:52,155 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:52,207 | INFO     | [job] validate thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:52,211 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:52,507 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:52,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:32:32] 2025-10-13 02:31:53,228 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:31:56,812 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:32:32] 2025-10-13 02:32:19,902 | INFO     | PID=24568 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:32:32] 2025-10-13 02:32:19,903 | INFO     | .. there are 3 such processes running
[2025-10-12 22:32:32] 2025-10-13 02:32:19,903 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:32:32] 2025-10-13 02:32:19,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:32:32] 2025-10-13 02:32:19,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:32:32] 2025-10-13 02:32:26,439 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:32:32] 2025-10-13 02:32:27,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437789300544)>', '<ExcThread(monitor, started 140437335549696)>']
[2025-10-12 22:32:32] 2025-10-13 02:32:27,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:32:32] 2025-10-13 02:32:27,942 | INFO     | [monitor] control thread has ended
[2025-10-12 22:32:32] 2025-10-13 02:32:32,643 | INFO     | all workflow threads have been joined
[2025-10-12 22:32:32] 2025-10-13 02:32:32,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:32:32] 2025-10-13 02:32:32,644 | INFO     | traces error code: 0
[2025-10-12 22:32:32] 2025-10-13 02:32:32,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:32:32] 2025-10-13 02:32:32,761 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:32:32] 2025-10-13 02:32:32,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:32:32] 2025-10-13 02:32:32,766 [wrapper] pilotpid: 24568
[2025-10-12 22:32:32] 2025-10-13 02:32:32,768 [wrapper] Pilot exit status: 0
[2025-10-12 22:32:32] 2025-10-13 02:32:32,777 [wrapper] pandaids: 6840538129
[2025-10-12 22:32:32] 2025-10-13 02:32:32,819 [wrapper] cleanup supervisor_pilot 10908 24569
[2025-10-12 22:32:32] 2025-10-13 02:32:32,822 [wrapper] Test setup, not cleaning
[2025-10-12 22:32:32] 2025-10-13 02:32:32,824 [wrapper] apfmon messages muted
[2025-10-12 22:32:32] 2025-10-13 02:32:32,827 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:32:32] 2025-10-13 02:32:32,829 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:32:32]  *** Error codes and diagnostics ***
[2025-10-12 22:32:32]     "exeErrorCode": 0,
[2025-10-12 22:32:32]     "exeErrorDiag": "",
[2025-10-12 22:32:32]     "pilotErrorCode": 0,
[2025-10-12 22:32:32]     "pilotErrorDiag": "",
[2025-10-12 22:32:32]  *** Listing of results directory ***
[2025-10-12 22:32:32] total 411472
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:03 queuedata.json
[2025-10-12 22:32:32] -rwx------ 1 boincer umatlas     36292 Oct 12 15:04 runpilot2-wrapper.sh
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:32:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:26 run_atlas
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:26 job.xml
[2025-10-12 22:32:32] -rw-r--r-- 2 boincer umatlas 221435060 Oct 12 19:26 EVNT.46676267._004439.pool.root.1
[2025-10-12 22:32:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:26 start_atlas.sh
[2025-10-12 22:32:32] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:26 shared
[2025-10-12 22:32:32] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 19:26 input.tar.gz
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:26 boinc_lockfile
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 19:26 pandaJob.out
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas    975603 Oct 12 19:27 agis_schedconf.cvmfs.json
[2025-10-12 22:32:32] drwx------ 5 boincer umatlas      4096 Oct 12 19:27 pilot3
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 22:29 init_data.xml
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas       531 Oct 12 22:31 boinc_task_state.xml
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas 192030545 Oct 12 22:31 HITS.46676269._087001.pool.root.1
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas      1054 Oct 12 22:31 memory_monitor_summary.json
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas   1560580 Oct 12 22:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas    432977 Oct 12 22:31 log.46676269._087001.job.log.tgz.1
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas      7860 Oct 12 22:31 heartbeat.json
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:32 boinc_mmap_file
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas        28 Oct 12 22:32 wrapper_checkpoint.txt
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas        95 Oct 12 22:32 pilot_heartbeat.json
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas      4821 Oct 12 22:32 pilotlog.txt
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas   1554464 Oct 12 22:32 log.46676269._087001.job.log.1
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas       357 Oct 12 22:32 output.list
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:32 runtime_log
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas   2007040 Oct 12 22:32 result.tar.gz
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 22:32 runtime_log.err
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas       662 Oct 12 22:32 L6dMDmuXGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlDlNDm1he1Gn.diag
[2025-10-12 22:32:32] -rw-r--r-- 1 boincer umatlas     21174 Oct 12 22:32 stderr.txt
[2025-10-12 22:32:32] HITS file was successfully produced:
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas 192030545 Oct 12 22:31 shared/HITS.pool.root.1
[2025-10-12 22:32:32]  *** Contents of shared directory: ***
[2025-10-12 22:32:32] total 406324
[2025-10-12 22:32:32] -rw-r--r-- 2 boincer umatlas 221435060 Oct 12 19:26 ATLAS.root_0
[2025-10-12 22:32:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:26 start_atlas.sh
[2025-10-12 22:32:32] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 19:26 input.tar.gz
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas 192030545 Oct 12 22:31 HITS.pool.root.1
[2025-10-12 22:32:32] -rw------- 1 boincer umatlas   2007040 Oct 12 22:32 result.tar.gz
22:32:34 (20350): run_atlas exited; CPU time 83383.958616
22:32:34 (20350): called boinc_finish(0)

</stderr_txt>
]]>

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