Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:50:42 (2061353): wrapper (7.7.26015): starting
10:50:42 (2061353): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 10:50:42] Arguments: --nthreads 2
[2025-10-13 10:50:42] Threads: 2
[2025-10-13 10:50:42] Checking for CVMFS
[2025-10-13 10:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:50:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:50:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:50:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:50:42] 2.9.2.0 779100 5602 62008 151654 0 57 19656772 36864000 0 130560 0 3393582 99.989 191235 809 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:50:42] CVMFS is ok
[2025-10-13 10:50:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:50:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:50:42] Further information can be found at the LHC@home message board.
[2025-10-13 10:50:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:50:42] Checking for apptainer binary...
[2025-10-13 10:50:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:50:42] Running /usr/bin/apptainer --version
[2025-10-13 10:50:42] apptainer version 1.4.1-1.1
[2025-10-13 10:50:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:50:42] atlasA229
[2025-10-13 10:50:42] apptainer works
[2025-10-13 10:50:42] Set ATHENA_PROC_NUMBER=2
[2025-10-13 10:50:42] Set ATHENA_CORE_NUMBER=2
[2025-10-13 10:50:43] Starting ATLAS job with PandaID=6840530415
[2025-10-13 10:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:58:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:58:35] 2025-10-13 10:58:04,968 | INFO     | ready for new job
[2025-10-13 12:58:35] 2025-10-13 10:58:04,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:58:35] 2025-10-13 10:58:04,970 | INFO     | ***************************************
[2025-10-13 12:58:35] 2025-10-13 10:58:04,970 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:58:35] 2025-10-13 10:58:04,970 | INFO     | ***************************************
[2025-10-13 12:58:35] 2025-10-13 10:58:04,970 | INFO     | 
[2025-10-13 12:58:35] 2025-10-13 10:58:04,971 | INFO     | architecture information:
[2025-10-13 12:58:35] 2025-10-13 10:58:04,971 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:58:35] 2025-10-13 10:58:04,996 | INFO     | cat /etc/os-release:
[2025-10-13 12:58:35] NAME="CentOS Linux"
[2025-10-13 12:58:35] VERSION="7 (Core)"
[2025-10-13 12:58:35] ID="centos"
[2025-10-13 12:58:35] ID_LIKE="rhel fedora"
[2025-10-13 12:58:35] VERSION_ID="7"
[2025-10-13 12:58:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:58:35] ANSI_COLOR="0;31"
[2025-10-13 12:58:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:58:35] HOME_URL="https://www.centos.org/"
[2025-10-13 12:58:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:58:35] 
[2025-10-13 12:58:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:58:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:58:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:58:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:58:35] 
[2025-10-13 12:58:35] 2025-10-13 10:58:04,996 | INFO     | ***************************************
[2025-10-13 12:58:35] 2025-10-13 10:58:05,500 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | INFO     | sufficient remaining disk space (341037809664 B)
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | INFO     | update_server=False
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | INFO     | aborting loop
[2025-10-13 12:58:35] 2025-10-13 10:58:05,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:58:35] 2025-10-13 10:58:05,760 | INFO     | all data control threads have been joined
[2025-10-13 12:58:35] 2025-10-13 10:58:06,022 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:58:35] 2025-10-13 10:58:06,022 | INFO     | all payload control threads have been joined
[2025-10-13 12:58:35] 2025-10-13 10:58:06,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:58:35] 2025-10-13 10:58:06,357 | INFO     | all job control threads have been joined
[2025-10-13 12:58:35] 2025-10-13 10:58:06,513 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:06,517 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:06,518 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:06,766 | INFO     | [data] control thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:06,793 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:06,802 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:06,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,028 | INFO     | [payload] control thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,106 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,181 | INFO     | [job] validate thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,363 | INFO     | [job] control thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,453 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,570 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:07,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:58:35] 2025-10-13 10:58:07,726 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:08,228 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:11,641 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:58:35] 2025-10-13 10:58:12,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847410673472)>', '<ExcThread(monitor, started 139846542681856)>']
[2025-10-13 12:58:35] 2025-10-13 10:58:17,886 | INFO     | all workflow threads have been joined
[2025-10-13 12:58:35] 2025-10-13 10:58:17,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:58:35] 2025-10-13 10:58:17,887 | INFO     | traces error code: 0
[2025-10-13 12:58:35] 2025-10-13 10:58:17,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:58:35] 2025-10-13 10:58:35,418 | INFO     | PID=2065057 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:58:35] 2025-10-13 10:58:35,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:58:35] 2025-10-13 10:58:35,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:58:35] 2025-10-13 10:58:35,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:58:35] 2025-10-13 10:58:35,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:58:35] 2025-10-13 10:58:35,418 | INFO     | [monitor] control thread has ended
[2025-10-13 12:58:35] 2025-10-13 10:58:35,457 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:58:35] 2025-10-13 10:58:35,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:58:35] 2025-10-13 10:58:35,462 [wrapper] pilotpid: 2065057
[2025-10-13 12:58:35] 2025-10-13 10:58:35,464 [wrapper] Pilot exit status: 0
[2025-10-13 12:58:35] 2025-10-13 10:58:35,470 [wrapper] pandaids: 6840530415
[2025-10-13 12:58:35] 2025-10-13 10:58:35,483 [wrapper] cleanup supervisor_pilot 2085787 2065058
[2025-10-13 12:58:35] 2025-10-13 10:58:35,486 [wrapper] Test setup, not cleaning
[2025-10-13 12:58:35] 2025-10-13 10:58:35,488 [wrapper] apfmon messages muted
[2025-10-13 12:58:35] 2025-10-13 10:58:35,490 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:58:35] 2025-10-13 10:58:35,492 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:58:35]  *** Error codes and diagnostics ***
[2025-10-13 12:58:35]     "exeErrorCode": 0,
[2025-10-13 12:58:35]     "exeErrorDiag": "",
[2025-10-13 12:58:35]     "pilotErrorCode": 0,
[2025-10-13 12:58:35]     "pilotErrorDiag": "",
[2025-10-13 12:58:35]  *** Listing of results directory ***
[2025-10-13 12:58:35] total 412192
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 19:32 pilot3.tar.gz
[2025-10-13 12:58:35] -rwx------ 1 boinc boinc     36292 Oct 12 19:50 runpilot2-wrapper.sh
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 19:50 queuedata.json
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:58:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:50 run_atlas
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:50 job.xml
[2025-10-13 12:58:35] -rw-r--r-- 2 boinc boinc 220645299 Oct 13 10:50 EVNT.46676267._001914.pool.root.1
[2025-10-13 12:58:35] -rw-r--r-- 2 boinc boinc    569689 Oct 13 10:50 input.tar.gz
[2025-10-13 12:58:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:50 start_atlas.sh
[2025-10-13 12:58:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:50 shared
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:50 boinc_setup_complete
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc      6206 Oct 13 10:50 init_data.xml
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:50 boinc_lockfile
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:50 pandaJob.out
[2025-10-13 12:58:35] -rw------- 1 boinc boinc    972857 Oct 13 10:50 agis_schedconf.cvmfs.json
[2025-10-13 12:58:35] -rw------- 1 boinc boinc   1560580 Oct 13 10:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:58:35] drwx------ 5 boinc boinc      4096 Oct 13 10:50 pilot3
[2025-10-13 12:58:35] -rw------- 1 boinc boinc 194821222 Oct 13 12:57 HITS.46676269._085341.pool.root.1
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:57 boinc_task_state.xml
[2025-10-13 12:58:35] -rw------- 1 boinc boinc      1016 Oct 13 12:57 memory_monitor_summary.json
[2025-10-13 12:58:35] -rw------- 1 boinc boinc    266685 Oct 13 12:57 log.46676269._085341.job.log.tgz.1
[2025-10-13 12:58:35] -rw------- 1 boinc boinc      7759 Oct 13 12:58 heartbeat.json
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:58 wrapper_checkpoint.txt
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:58 boinc_mmap_file
[2025-10-13 12:58:35] -rw------- 1 boinc boinc       747 Oct 13 12:58 pilotlog.txt
[2025-10-13 12:58:35] -rw------- 1 boinc boinc        95 Oct 13 12:58 pilot_heartbeat.json
[2025-10-13 12:58:35] -rw------- 1 boinc boinc   1098338 Oct 13 12:58 log.46676269._085341.job.log.1
[2025-10-13 12:58:35] -rw------- 1 boinc boinc       357 Oct 13 12:58 output.list
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:58 runtime_log
[2025-10-13 12:58:35] -rw------- 1 boinc boinc   1382400 Oct 13 12:58 result.tar.gz
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc      8792 Oct 13 12:58 runtime_log.err
[2025-10-13 12:58:35] -rw------- 1 boinc boinc       662 Oct 13 12:58 OItKDmDOFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4aUMDmPXzD1m.diag
[2025-10-13 12:58:35] -rw-r--r-- 1 boinc boinc      9527 Oct 13 12:58 stderr.txt
[2025-10-13 12:58:35] HITS file was successfully produced:
[2025-10-13 12:58:35] -rw------- 1 boinc boinc 194821222 Oct 13 12:57 shared/HITS.pool.root.1
[2025-10-13 12:58:35]  *** Contents of shared directory: ***
[2025-10-13 12:58:35] total 407668
[2025-10-13 12:58:35] -rw-r--r-- 2 boinc boinc 220645299 Oct 13 10:50 ATLAS.root_0
[2025-10-13 12:58:35] -rw-r--r-- 2 boinc boinc    569689 Oct 13 10:50 input.tar.gz
[2025-10-13 12:58:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:50 start_atlas.sh
[2025-10-13 12:58:35] -rw------- 1 boinc boinc 194821222 Oct 13 12:57 HITS.pool.root.1
[2025-10-13 12:58:35] -rw------- 1 boinc boinc   1382400 Oct 13 12:58 result.tar.gz
12:58:37 (2061353): run_atlas exited; CPU time 14698.610733
12:58:37 (2061353): called boinc_finish(0)

</stderr_txt>
]]>

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