Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:24:55 (2604471): wrapper (7.7.26015): starting
19:24:55 (2604471): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 19:24:55] Arguments: --nthreads 4
[2025-10-12 19:24:55] Threads: 4
[2025-10-12 19:24:55] Checking for CVMFS
[2025-10-12 19:24:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:24:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:24:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:24:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:24:56] 2.13.2.0 3732220 7230 61248 151640 2 188 2717418 4096001 13740 130560 0 50296883 99.999 378542 1280 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 19:24:56] CVMFS is ok
[2025-10-12 19:24:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:24:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 19:24:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 19:24:56] Further information can be found at the LHC@home message board.
[2025-10-12 19:24:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:24:56] Checking for apptainer binary...
[2025-10-12 19:24:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:24:56] Running /usr/bin/apptainer --version
[2025-10-12 19:24:56] apptainer version 1.4.3
[2025-10-12 19:24:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:24:56] T7810-Ubuntu
[2025-10-12 19:24:56] apptainer works
[2025-10-12 19:24:56] Set ATHENA_PROC_NUMBER=4
[2025-10-12 19:24:56] Set ATHENA_CORE_NUMBER=4
[2025-10-12 19:24:56] Starting ATLAS job with PandaID=6840713393
[2025-10-12 19:24:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:55:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:55:36] 2025-10-13 02:54:44,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:55:36] 2025-10-13 02:54:44,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:55:36] 2025-10-13 02:54:44,050 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:55:36] 2025-10-13 02:54:44,050 | INFO     | sum of square deviations: 2710627567.5
[2025-10-12 22:55:36] 2025-10-13 02:54:44,052 | INFO     | sum of deviations: 17797701172.999992
[2025-10-12 22:55:36] 2025-10-13 02:54:44,052 | INFO     | mean x: 1760317791.5
[2025-10-12 22:55:36] 2025-10-13 02:54:44,052 | INFO     | mean y: 2287386.504854369
[2025-10-12 22:55:36] 2025-10-13 02:54:44,052 | INFO     | -- intersect: -11555777763.525133
[2025-10-12 22:55:36] 2025-10-13 02:54:44,052 | INFO     | intersect: -11555777763.525133
[2025-10-12 22:55:36] 2025-10-13 02:54:44,053 | INFO     | chi2: 2.371229719944762
[2025-10-12 22:55:36] 2025-10-13 02:54:44,053 | INFO     | sum of square deviations: 2518000700.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,055 | INFO     | sum of deviations: 30100011593.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,055 | INFO     | mean x: 1760317639.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,055 | INFO     | mean y: 2296923.7512437813
[2025-10-12 22:55:36] 2025-10-13 02:54:44,055 | INFO     | -- intersect: -21040422143.508106
[2025-10-12 22:55:36] 2025-10-13 02:54:44,055 | INFO     | intersect: -21040422143.508106
[2025-10-12 22:55:36] 2025-10-13 02:54:44,056 | INFO     | chi2: 1.5558638728547065
[2025-10-12 22:55:36] 2025-10-13 02:54:44,056 | INFO     | current chi2=1.5558638728547065 (change=34.38578051851719 %)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,056 | INFO     | sum of square deviations: 2334722845.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,057 | INFO     | sum of deviations: 29194303448.499996
[2025-10-12 22:55:36] 2025-10-13 02:54:44,058 | INFO     | mean x: 1760317486.5
[2025-10-12 22:55:36] 2025-10-13 02:54:44,058 | INFO     | mean y: 2296170.076530612
[2025-10-12 22:55:36] 2025-10-13 02:54:44,058 | INFO     | -- intersect: -22009414117.780697
[2025-10-12 22:55:36] 2025-10-13 02:54:44,058 | INFO     | intersect: -22009414117.780697
[2025-10-12 22:55:36] 2025-10-13 02:54:44,058 | INFO     | chi2: 1.5568113592996538
[2025-10-12 22:55:36] 2025-10-13 02:54:44,059 | INFO     | current chi2=1.5568113592996538 (change=-0.06089777270866187 %)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,059 | INFO     | right removable region: 195
[2025-10-12 22:55:36] 2025-10-13 02:54:44,059 | INFO     | sum of square deviations: 2518000700.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,060 | INFO     | sum of deviations: -13786705648.000002
[2025-10-12 22:55:36] 2025-10-13 02:54:44,061 | INFO     | mean x: 1760317944.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,061 | INFO     | mean y: 2312155.9552238807
[2025-10-12 22:55:36] 2025-10-13 02:54:44,061 | INFO     | -- intersect: 9640508579.340075
[2025-10-12 22:55:36] 2025-10-13 02:54:44,061 | INFO     | intersect: 9640508579.340075
[2025-10-12 22:55:36] 2025-10-13 02:54:44,061 | INFO     | chi2: 0.843628513415951
[2025-10-12 22:55:36] 2025-10-13 02:54:44,062 | INFO     | current chi2=0.843628513415951 (change=64.42232035470595 %)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,062 | INFO     | sum of square deviations: 2334722845.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,063 | INFO     | sum of deviations: -14136022727.5
[2025-10-12 22:55:36] 2025-10-13 02:54:44,063 | INFO     | mean x: 1760318096.5
[2025-10-12 22:55:36] 2025-10-13 02:54:44,063 | INFO     | mean y: 2312433.964285714
[2025-10-12 22:55:36] 2025-10-13 02:54:44,064 | INFO     | -- intersect: 10660492557.161537
[2025-10-12 22:55:36] 2025-10-13 02:54:44,064 | INFO     | intersect: 10660492557.161537
[2025-10-12 22:55:36] 2025-10-13 02:54:44,064 | INFO     | chi2: 0.840634434027316
[2025-10-12 22:55:36] 2025-10-13 02:54:44,064 | INFO     | current chi2=0.840634434027316 (change=0.35490495413812795 %)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,064 | INFO     | left removable region: 20
[2025-10-12 22:55:36] 2025-10-13 02:54:44,065 | INFO     | sum of square deviations: 1661798600.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,066 | INFO     | sum of deviations: -1060048850.0000004
[2025-10-12 22:55:36] 2025-10-13 02:54:44,066 | INFO     | mean x: 1760318066.0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,066 | INFO     | mean y: 2322276.7485714285
[2025-10-12 22:55:36] 2025-10-13 02:54:44,066 | INFO     | -- intersect: 1125215954.4165661
[2025-10-12 22:55:36] 2025-10-13 02:54:44,066 | INFO     | intersect: 1125215954.4165661
[2025-10-12 22:55:36] 2025-10-13 02:54:44,067 | INFO     | chi2: 0.0019649232395416287
[2025-10-12 22:55:36] 2025-10-13 02:54:44,067 | INFO     | -- intersect: 1125215954.4165661
[2025-10-12 22:55:36] 2025-10-13 02:54:44,067 | INFO     | current memory leak: -0.64 B/s (using 175 data points, chi2=0.00)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,067 | INFO     | could have reported an average CPU frequency of 2630 MHz (10 samples)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | ..............................
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . Timing measurements:
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . get job = 0 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . initial setup = 4 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . payload setup = 6 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . stage-in = 0 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . payload execution = 12534 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,068 | INFO     | . stage-out = 5 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,069 | INFO     | . log creation = 0 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,069 | INFO     | ..............................
[2025-10-12 22:55:36] 2025-10-13 02:54:44,177 | INFO     | 
[2025-10-12 22:55:36] 2025-10-13 02:54:44,177 | INFO     | job summary report
[2025-10-12 22:55:36] 2025-10-13 02:54:44,177 | INFO     | --------------------------------------------------
[2025-10-12 22:55:36] 2025-10-13 02:54:44,177 | INFO     | PanDA job id: 6840713393
[2025-10-12 22:55:36] 2025-10-13 02:54:44,177 | INFO     | task id: 46676269
[2025-10-12 22:55:36] 2025-10-13 02:54:44,177 | INFO     | errors: (none)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | pilot state: finished 
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | transexitcode: 0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | exeerrorcode: 0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | exeerrordiag: 
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | exitcode: 0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | exitmsg: OK
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | cpuconsumptiontime: 48806 s
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | nevents: 400
[2025-10-12 22:55:36] 2025-10-13 02:54:44,178 | INFO     | neventsw: 0
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | pid: 2615458
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | pgrp: 2615458
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | corecount: 4
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | event service: False
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | sizes: {0: 2348872, 1: 2348900, 6: 2349162, 11: 2349190, 12545: 2379035, 12551: 2388247, 12557: 2388385}
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | --------------------------------------------------
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | 
[2025-10-12 22:55:36] 2025-10-13 02:54:44,179 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/20
[2025-10-12 22:55:36] 2025-10-13 02:54:44,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:55:36] 2025-10-13 02:54:44,209 | INFO     | job 6840713393 has completed (purged errors)
[2025-10-12 22:55:36] 2025-10-13 02:54:44,209 | INFO     | overall cleanup function is called
[2025-10-12 22:55:36] 2025-10-13 02:54:45,217 | INFO     | --- collectZombieJob: --- 10, [2615458]
[2025-10-12 22:55:36] 2025-10-13 02:54:45,217 | INFO     | zombie collector waiting for pid 2615458
[2025-10-12 22:55:36] 2025-10-13 02:54:45,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:55:36] 2025-10-13 02:54:45,217 | INFO     | collected zombie processes
[2025-10-12 22:55:36] 2025-10-13 02:54:45,217 | INFO     | will attempt to kill all subprocesses of pid=2615458
[2025-10-12 22:55:36] 2025-10-13 02:54:45,656 | INFO     | process IDs to be killed: [2615458] (in reverse order)
[2025-10-12 22:55:36] 2025-10-13 02:54:45,780 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:55:36] 2025-10-13 02:54:45,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:55:36] 2025-10-13 02:54:45,793 | INFO     | did not find any defunct processes belonging to 2615458
[2025-10-12 22:55:36] 2025-10-13 02:54:45,804 | INFO     | did not find any defunct processes belonging to 2615458
[2025-10-12 22:55:36] 2025-10-13 02:54:45,805 | INFO     | ready for new job
[2025-10-12 22:55:36] 2025-10-13 02:54:45,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:55:36] 2025-10-13 02:54:45,807 | INFO     | ***************************************
[2025-10-12 22:55:36] 2025-10-13 02:54:45,807 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:55:36] 2025-10-13 02:54:45,807 | INFO     | ***************************************
[2025-10-12 22:55:36] 2025-10-13 02:54:45,808 | INFO     | 
[2025-10-12 22:55:36] 2025-10-13 02:54:45,811 | INFO     | architecture information:
[2025-10-12 22:55:36] 2025-10-13 02:54:45,811 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:55:36] 2025-10-13 02:54:45,832 | INFO     | cat /etc/os-release:
[2025-10-12 22:55:36] NAME="CentOS Linux"
[2025-10-12 22:55:36] VERSION="7 (Core)"
[2025-10-12 22:55:36] ID="centos"
[2025-10-12 22:55:36] ID_LIKE="rhel fedora"
[2025-10-12 22:55:36] VERSION_ID="7"
[2025-10-12 22:55:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:55:36] ANSI_COLOR="0;31"
[2025-10-12 22:55:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:55:36] HOME_URL="https://www.centos.org/"
[2025-10-12 22:55:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:55:36] 
[2025-10-12 22:55:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:55:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:55:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:55:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:55:36] 
[2025-10-12 22:55:36] 2025-10-13 02:54:45,832 | INFO     | ***************************************
[2025-10-12 22:55:36] 2025-10-13 02:54:46,335 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/20
[2025-10-12 22:55:36] 2025-10-13 02:54:46,356 | INFO     | sufficient remaining disk space (398114947072 B)
[2025-10-12 22:55:36] 2025-10-13 02:54:46,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:55:36] 2025-10-13 02:54:46,357 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:55:36] 2025-10-13 02:54:46,357 | INFO     | update_server=False
[2025-10-12 22:55:36] 2025-10-13 02:54:46,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:55:36] 2025-10-13 02:54:46,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:55:36] 2025-10-13 02:54:46,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:55:36] 2025-10-13 02:54:46,704 | INFO     | aborting loop
[2025-10-12 22:55:36] 2025-10-13 02:54:46,767 | INFO     | all data control threads have been joined
[2025-10-12 22:55:36] 2025-10-13 02:54:46,923 | INFO     | all job control threads have been joined
[2025-10-12 22:55:36] 2025-10-13 02:54:47,226 | INFO     | all payload control threads have been joined
[2025-10-12 22:55:36] 2025-10-13 02:54:47,362 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,649 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,693 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,709 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,770 | INFO     | [data] control thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,929 | INFO     | [job] control thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,940 | INFO     | [job] validate thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:47,947 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,232 | INFO     | [payload] control thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,290 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,363 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,587 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,597 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:48,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:55:36] 2025-10-13 02:54:49,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:55:36] 2025-10-13 02:54:50,195 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:54:52,943 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:55:36] 2025-10-13 02:55:05,953 [wrapper] supervise_pilot (15 min periods counter: 15)
[2025-10-12 22:55:36] 2025-10-13 02:55:17,458 | INFO     | PID=2608496 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:55:36] 2025-10-13 02:55:17,458 | INFO     | .. there are 16 such processes running
[2025-10-12 22:55:36] 2025-10-13 02:55:17,458 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:55:36] 2025-10-13 02:55:17,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:55:36] 2025-10-13 02:55:17,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:55:36] 2025-10-13 02:55:30,788 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:55:36] 2025-10-13 02:55:31,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133329979918144)>', '<ExcThread(monitor, started 133329273747200)>']
[2025-10-12 22:55:36] 2025-10-13 02:55:31,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:55:36] 2025-10-13 02:55:31,527 | INFO     | [monitor] control thread has ended
[2025-10-12 22:55:36] 2025-10-13 02:55:36,237 | INFO     | all workflow threads have been joined
[2025-10-12 22:55:36] 2025-10-13 02:55:36,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:55:36] 2025-10-13 02:55:36,237 | INFO     | traces error code: 0
[2025-10-12 22:55:36] 2025-10-13 02:55:36,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:55:36] 2025-10-13 02:55:36,367 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:55:36] 2025-10-13 02:55:36,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:55:36] 2025-10-13 02:55:36,374 [wrapper] pilotpid: 2608496
[2025-10-12 22:55:36] 2025-10-13 02:55:36,376 [wrapper] Pilot exit status: 0
[2025-10-12 22:55:36] 2025-10-13 02:55:36,391 [wrapper] pandaids: 6840713393
[2025-10-12 22:55:36] 2025-10-13 02:55:36,471 [wrapper] cleanup supervisor_pilot 3164415 2608497
[2025-10-12 22:55:36] 2025-10-13 02:55:36,476 [wrapper] Test setup, not cleaning
[2025-10-12 22:55:36] 2025-10-13 02:55:36,483 [wrapper] apfmon messages muted
[2025-10-12 22:55:36] 2025-10-13 02:55:36,487 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:55:36] 2025-10-13 02:55:36,491 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:55:36]  *** Error codes and diagnostics ***
[2025-10-12 22:55:36]     "exeErrorCode": 0,
[2025-10-12 22:55:36]     "exeErrorDiag": "",
[2025-10-12 22:55:36]     "pilotErrorCode": 0,
[2025-10-12 22:55:36]     "pilotErrorDiag": "",
[2025-10-12 22:55:36]  *** Listing of results directory ***
[2025-10-12 22:55:36] total 416216
[2025-10-12 22:55:36] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-12 22:55:36] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 15:39 queuedata.json
[2025-10-12 22:55:36] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 15:40 runpilot2-wrapper.sh
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 19:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:55:36] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 19:24 run_atlas
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 19:24 job.xml
[2025-10-12 22:55:36] -rw-r--r-- 2 whitlerd whitlerd 219953647 Oct 12 19:24 EVNT.46676267._004463.pool.root.1
[2025-10-12 22:55:36] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 19:24 start_atlas.sh
[2025-10-12 22:55:36] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 19:24 shared
[2025-10-12 22:55:36] -rw-r--r-- 2 whitlerd whitlerd    569680 Oct 12 19:24 input.tar.gz
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 19:24 boinc_setup_complete
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 12 19:24 init_data.xml
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 19:24 boinc_lockfile
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 12 19:24 pandaJob.out
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd    975603 Oct 12 19:25 agis_schedconf.cvmfs.json
[2025-10-12 22:55:36] drwx------ 5 whitlerd whitlerd      4096 Oct 12 19:25 pilot3
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd 198037958 Oct 12 22:53 HITS.46676269._087715.pool.root.1
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 12 22:54 boinc_task_state.xml
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd      1044 Oct 12 22:54 memory_monitor_summary.json
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 22:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd    376099 Oct 12 22:54 log.46676269._087715.job.log.tgz.1
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd        95 Oct 12 22:54 pilot_heartbeat.json
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd      7788 Oct 12 22:54 heartbeat.json
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 22:55 boinc_mmap_file
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 22:55 wrapper_checkpoint.txt
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd      4840 Oct 12 22:55 pilotlog.txt
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd   1774104 Oct 12 22:55 log.46676269._087715.job.log.1
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd       357 Oct 12 22:55 output.list
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 22:55 runtime_log
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd   2170880 Oct 12 22:55 result.tar.gz
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 12 22:55 runtime_log.err
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd       650 Oct 12 22:55 kiGLDmt6GS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDJlNDmtAYeDm.diag
[2025-10-12 22:55:36] -rw-rw-r-- 1 whitlerd whitlerd     20999 Oct 12 22:55 stderr.txt
[2025-10-12 22:55:36] HITS file was successfully produced:
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd 198037958 Oct 12 22:53 shared/HITS.pool.root.1
[2025-10-12 22:55:36]  *** Contents of shared directory: ***
[2025-10-12 22:55:36] total 410904
[2025-10-12 22:55:36] -rw-r--r-- 2 whitlerd whitlerd 219953647 Oct 12 19:24 ATLAS.root_0
[2025-10-12 22:55:36] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 19:24 start_atlas.sh
[2025-10-12 22:55:36] -rw-r--r-- 2 whitlerd whitlerd    569680 Oct 12 19:24 input.tar.gz
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd 198037958 Oct 12 22:53 HITS.pool.root.1
[2025-10-12 22:55:36] -rw------- 1 whitlerd whitlerd   2170880 Oct 12 22:55 result.tar.gz
22:55:38 (2604471): run_atlas exited; CPU time 49463.875824
22:55:38 (2604471): called boinc_finish(0)

</stderr_txt>
]]>

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