Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:43 (1272685): wrapper (7.7.26015): starting
16:50:43 (1272685): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:50:43] Arguments: --nthreads 12
[2025-10-12 16:50:43] Threads: 12
[2025-10-12 16:50:43] Checking for CVMFS
[2025-10-12 16:50:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:50:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:50:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:50:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:50:45] 2.11.5.0 2789 32137 213824 151641 3 464 39716396 45568000 19561 130560 0 349106293 99.878 131291552 27352 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 16:50:45] CVMFS is ok
[2025-10-12 16:50:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:50:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:50:45] Further information can be found at the LHC@home message board.
[2025-10-12 16:50:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:50:45] Checking for apptainer binary...
[2025-10-12 16:50:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:50:45] Running /usr/bin/apptainer --version
[2025-10-12 16:50:45] apptainer version 1.4.1-1.el9
[2025-10-12 16:50:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:50:45] wns0082.triumf.lcg
[2025-10-12 16:50:45] apptainer works
[2025-10-12 16:50:45] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:50:45] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:50:45] Starting ATLAS job with PandaID=6840834603
[2025-10-12 16:50:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:56:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | wrong length of table data, x=[1760313154.0], y=[1736.0] (must be same and length>=4)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | could have reported an average CPU frequency of 2563 MHz (4 samples)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | ..............................
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . Timing measurements:
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . get job = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . initial setup = 3 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . payload setup = 19 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . stage-in = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . payload execution = 47 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . stage-out = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . log creation = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | ..............................
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840834603/pilotlog.txt
[2025-10-12 16:56:20] 2025-10-12 23:55:24,437 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 16:56:20] - Log from pilotlog.txt -
[2025-10-12 16:56:20] 2025-10-12 23:55:24,407 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840834603/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,407 | INFO     | extracted standard info from prmon json
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | wrong length of table data, x=[1760313154.0], y=[1736.0] (must be same and length>=4)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | could have reported an average CPU frequency of 2563 MHz (4 samples)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | ..............................
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . Timing measurements:
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . get job = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . initial setup = 3 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . payload setup = 19 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . stage-in = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . payload execution = 47 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . stage-out = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . log creation = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | ..............................
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840834603/pilotlog.txt
[2025-10-12 16:56:20] 2025-10-12 23:55:24,437 | WARNING  | 
[2025-10-12 16:56:20] [begin log extracts]
[2025-10-12 16:56:20] - Log from pilotlog.txt -
[2025-10-12 16:56:20] 2025-10-12 23:55:24,407 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840834603/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,407 | INFO     | extracted standard info from prmon json
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:56:20] 2025-10-12 23:55:24,408 | WARNING  | wrong length of table data, x=[1760313154.0], y=[1736.0] (must be same and length>=4)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | could have reported an average CPU frequency of 2563 MHz (4 samples)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | ..............................
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . Timing measurements:
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . get job = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . initial setup = 3 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . payload setup = 19 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . stage-in = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . payload execution = 47 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . stage-out = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | . log creation = 0 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | ..............................
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:56:20] 2025-10-12 23:55:24,409 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840834603/pilotlog.txt
[2025-10-12 16:56:20] [end log extracts]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,438 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,438 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | 
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | job summary report
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | --------------------------------------------------
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | PanDA job id: 6840834603
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | task id: 46676269
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 16:52:52,497 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | pilot state: failed 
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | transexitcode: 65
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | exeerrorcode: 65
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | exitcode: 65
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 16:56:20] 2025-10-12 23:55:24,867 | INFO     | nevents: 0
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | neventsw: 0
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | pid: 1283205
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | pgrp: 1283205
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | corecount: 12
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | event service: False
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | sizes: {0: 2348804, 11: 2348804, 22: 2349122, 70: 2372416, 71: 2372392, 72: 2376712, 73: 2376868, 213: 2377034}
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | --------------------------------------------------
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | 
[2025-10-12 16:56:20] 2025-10-12 23:55:24,868 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 16:56:20] 2025-10-12 23:55:24,882 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:56:20] 2025-10-12 23:55:24,884 | INFO     | job 6840834603 has completed (purged errors)
[2025-10-12 16:56:20] 2025-10-12 23:55:24,884 | INFO     | overall cleanup function is called
[2025-10-12 16:56:20] 2025-10-12 23:55:25,891 | INFO     | --- collectZombieJob: --- 10, [1283205]
[2025-10-12 16:56:20] 2025-10-12 23:55:25,891 | INFO     | zombie collector waiting for pid 1283205
[2025-10-12 16:56:20] 2025-10-12 23:55:25,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:56:20] 2025-10-12 23:55:25,891 | INFO     | collected zombie processes
[2025-10-12 16:56:20] 2025-10-12 23:55:25,891 | INFO     | will attempt to kill all subprocesses of pid=1283205
[2025-10-12 16:56:20] 2025-10-12 23:55:26,448 | INFO     | process IDs to be killed: [1283205] (in reverse order)
[2025-10-12 16:56:20] 2025-10-12 23:55:26,547 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:56:20] 2025-10-12 23:55:26,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:56:20] 2025-10-12 23:55:26,576 | INFO     | did not find any defunct processes belonging to 1283205
[2025-10-12 16:56:20] 2025-10-12 23:55:26,600 | INFO     | did not find any defunct processes belonging to 1283205
[2025-10-12 16:56:20] 2025-10-12 23:55:26,600 | INFO     | ready for new job
[2025-10-12 16:56:20] 2025-10-12 23:55:26,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:56:20] 2025-10-12 23:55:26,602 | INFO     | ***************************************
[2025-10-12 16:56:20] 2025-10-12 23:55:26,602 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:56:20] 2025-10-12 23:55:26,602 | INFO     | ***************************************
[2025-10-12 16:56:20] 2025-10-12 23:55:26,602 | INFO     | 
[2025-10-12 16:56:20] 2025-10-12 23:55:26,604 | INFO     | architecture information:
[2025-10-12 16:56:20] 2025-10-12 23:55:26,610 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:56:20] 2025-10-12 23:55:26,691 | INFO     | cat /etc/os-release:
[2025-10-12 16:56:20] NAME="CentOS Linux"
[2025-10-12 16:56:20] VERSION="7 (Core)"
[2025-10-12 16:56:20] ID="centos"
[2025-10-12 16:56:20] ID_LIKE="rhel fedora"
[2025-10-12 16:56:20] VERSION_ID="7"
[2025-10-12 16:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:56:20] ANSI_COLOR="0;31"
[2025-10-12 16:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:56:20] HOME_URL="https://www.centos.org/"
[2025-10-12 16:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:56:20] 
[2025-10-12 16:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:56:20] 
[2025-10-12 16:56:20] 2025-10-12 23:55:26,691 | INFO     | ***************************************
[2025-10-12 16:56:20] 2025-10-12 23:55:27,194 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 16:56:20] 2025-10-12 23:55:27,233 | INFO     | sufficient remaining disk space (1894406684672 B)
[2025-10-12 16:56:20] 2025-10-12 23:55:27,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:56:20] 2025-10-12 23:55:27,233 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:56:20] 2025-10-12 23:55:27,233 | INFO     | update_server=False
[2025-10-12 16:56:20] 2025-10-12 23:55:27,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:56:20] 2025-10-12 23:55:27,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:56:20] 2025-10-12 23:55:27,250 | INFO     | all data control threads have been joined
[2025-10-12 16:56:20] 2025-10-12 23:55:27,502 | INFO     | all payload control threads have been joined
[2025-10-12 16:56:20] 2025-10-12 23:55:27,652 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:56:20] 2025-10-12 23:55:27,652 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:56:20] 2025-10-12 23:55:27,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:56:20] 2025-10-12 23:55:27,653 | INFO     | will abort loop
[2025-10-12 16:56:20] 2025-10-12 23:55:27,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:56:20] 2025-10-12 23:55:28,240 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:28,256 | INFO     | [data] control thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:28,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:28,465 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:28,477 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:28,508 | INFO     | [payload] control thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:28,616 | INFO     | all job control threads have been joined
[2025-10-12 16:56:20] 2025-10-12 23:55:28,671 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,403 | INFO     | [job] validate thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,492 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,492 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,629 | INFO     | [job] control thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:56:20] 2025-10-12 23:55:29,661 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,704 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:29,742 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:30,652 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:31,250 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:56:20] 2025-10-12 23:55:56,790 | INFO     | PID=1276474 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:56:20] 2025-10-12 23:55:56,790 | INFO     | .. there are 35 such processes running
[2025-10-12 16:56:20] 2025-10-12 23:55:56,791 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:56:20] 2025-10-12 23:55:56,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:56:20] 2025-10-12 23:55:56,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:56:20] 2025-10-12 23:56:14,403 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:56:20] 2025-10-12 23:56:15,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519475701568)>', '<ExcThread(monitor, started 140519074146048)>']
[2025-10-12 16:56:20] 2025-10-12 23:56:15,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:56:20] 2025-10-12 23:56:15,909 | INFO     | [monitor] control thread has ended
[2025-10-12 16:56:20] 2025-10-12 23:56:20,134 | INFO     | all workflow threads have been joined
[2025-10-12 16:56:20] 2025-10-12 23:56:20,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:56:20] 2025-10-12 23:56:20,134 | INFO     | traces error code: 0
[2025-10-12 16:56:20] 2025-10-12 23:56:20,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:56:20] 2025-10-12 23:56:20,333 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:56:20] 2025-10-12 23:56:20,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:56:20] 2025-10-12 23:56:20,341 [wrapper] pilotpid: 1276474
[2025-10-12 16:56:20] 2025-10-12 23:56:20,346 [wrapper] Pilot exit status: 0
[2025-10-12 16:56:20] 2025-10-12 23:56:20,376 [wrapper] pandaids: 6840834603
[2025-10-12 16:56:20] 2025-10-12 23:56:20,511 [wrapper] cleanup supervisor_pilot 1276480 1276475
[2025-10-12 16:56:20] 2025-10-12 23:56:20,524 [wrapper] Test setup, not cleaning
[2025-10-12 16:56:20] 2025-10-12 23:56:20,540 [wrapper] apfmon messages muted
[2025-10-12 16:56:20] 2025-10-12 23:56:20,550 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:56:20] 2025-10-12 23:56:20,557 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:56:20]  *** Error codes and diagnostics ***
[2025-10-12 16:56:20]     "exeErrorCode": 65,
[2025-10-12 16:56:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 16:56:20]     "pilotErrorCode": 1305,
[2025-10-12 16:56:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 16:56:20]  *** Listing of results directory ***
[2025-10-12 16:56:20] total 218548
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:31 pilot3.tar.gz
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:36 queuedata.json
[2025-10-12 16:56:20] -rwx------. 1 boinc boinc     36292 Oct 12 14:37 runpilot2-wrapper.sh
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:56:20] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:50 run_atlas
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:50 job.xml
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc      6594 Oct 12 16:50 init_data.xml
[2025-10-12 16:56:20] -rw-r--r--. 2 boinc boinc 219658539 Oct 12 16:50 EVNT.46676267._001786.pool.root.1
[2025-10-12 16:56:20] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:50 start_atlas.sh
[2025-10-12 16:56:20] drwxrwx--x. 2 boinc boinc      4096 Oct 12 16:50 shared
[2025-10-12 16:56:20] -rw-r--r--. 2 boinc boinc    569686 Oct 12 16:50 input.tar.gz
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:50 boinc_lockfile
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:50 pandaJob.out
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc    975603 Oct 12 16:51 agis_schedconf.cvmfs.json
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc   1560580 Oct 12 16:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:56:20] drwx------. 5 boinc boinc      4096 Oct 12 16:51 pilot3
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc       523 Oct 12 16:52 boinc_task_state.xml
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc       952 Oct 12 16:52 memory_monitor_summary.json
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc     21985 Oct 12 16:53 log.46676269._090196.job.log.tgz.1
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc        95 Oct 12 16:55 pilot_heartbeat.json
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc      8408 Oct 12 16:55 heartbeat.json
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc        22 Oct 12 16:56 wrapper_checkpoint.txt
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:56 boinc_mmap_file
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc      5009 Oct 12 16:56 pilotlog.txt
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc     92183 Oct 12 16:56 log.46676269._090196.job.log.1
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc       188 Oct 12 16:56 output.list
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:56 runtime_log
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc    133120 Oct 12 16:56 result.tar.gz
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc       643 Oct 12 16:56 XrXMDmUwIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm34UMDmBCr9jn.diag
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc      8528 Oct 12 16:56 runtime_log.err
[2025-10-12 16:56:20] -rw-r--r--. 1 boinc boinc     21821 Oct 12 16:56 stderr.txt
[2025-10-12 16:56:20] No HITS result produced
[2025-10-12 16:56:20]  *** Contents of shared directory: ***
[2025-10-12 16:56:20] total 215224
[2025-10-12 16:56:20] -rw-r--r--. 2 boinc boinc 219658539 Oct 12 16:50 ATLAS.root_0
[2025-10-12 16:56:20] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:50 start_atlas.sh
[2025-10-12 16:56:20] -rw-r--r--. 2 boinc boinc    569686 Oct 12 16:50 input.tar.gz
[2025-10-12 16:56:20] -rw-------. 1 boinc boinc    133120 Oct 12 16:56 result.tar.gz
16:56:22 (1272685): run_atlas exited; CPU time 28.982583
16:56:22 (1272685): called boinc_finish(0)

</stderr_txt>
]]>

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