Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:05 (3003333): wrapper (7.7.26015): starting
20:58:05 (3003333): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 20:58:06] Arguments: --nthreads 9
[2025-10-12 20:58:06] Threads: 9
[2025-10-12 20:58:06] Checking for CVMFS
[2025-10-12 20:58:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:58:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:58:07] 2.13.2.0 5045 6429 76024 151642 2 65 20809282 40960001 21991 16776704 0 18544199 99.923 2997041 38235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:58:07] CVMFS is ok
[2025-10-12 20:58:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:58:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:58:07] Further information can be found at the LHC@home message board.
[2025-10-12 20:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:58:07] Checking for apptainer binary...
[2025-10-12 20:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:58:07] Running /usr/bin/apptainer --version
[2025-10-12 20:58:07] apptainer version 1.4.3-1.el9
[2025-10-12 20:58:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:58:07] c-212-11.aglt2.org
[2025-10-12 20:58:07] apptainer works
[2025-10-12 20:58:07] Set ATHENA_PROC_NUMBER=9
[2025-10-12 20:58:07] Set ATHENA_CORE_NUMBER=9
[2025-10-12 20:58:07] Starting ATLAS job with PandaID=6840750874
[2025-10-12 20:58:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:02:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:02:13] 2025-10-13 03:01:23,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:02:13] 2025-10-13 03:01:23,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:02:13] 2025-10-13 03:01:23,293 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:02:13] 2025-10-13 03:01:23,294 | INFO     | sum of square deviations: 535833363.46666616
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | sum of deviations: 266048497.3999958
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | mean x: 1760320831.2666667
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | mean y: 2506227.8
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | -- intersect: -871516824.9462159
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | intersect: -871516824.9462159
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | chi2: 2.486895673640589
[2025-10-12 23:02:13] 2025-10-13 03:01:23,295 | INFO     | sum of square deviations: 471636960.4000002
[2025-10-12 23:02:13] 2025-10-13 03:01:23,296 | INFO     | sum of deviations: 8167915720.799999
[2025-10-12 23:02:13] 2025-10-13 03:01:23,296 | INFO     | mean x: 1760320678.8
[2025-10-12 23:02:13] 2025-10-13 03:01:23,296 | INFO     | mean y: 2524338.208695652
[2025-10-12 23:02:13] 2025-10-13 03:01:23,296 | INFO     | -- intersect: -30483107945.20181
[2025-10-12 23:02:13] 2025-10-13 03:01:23,296 | INFO     | intersect: -30483107945.20181
[2025-10-12 23:02:13] 2025-10-13 03:01:23,297 | INFO     | chi2: 1.6981637098755877
[2025-10-12 23:02:13] 2025-10-13 03:01:23,297 | INFO     | current chi2=1.6981637098755877 (change=31.715522775041443 %)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,297 | INFO     | sum of square deviations: 412762285.1000002
[2025-10-12 23:02:13] 2025-10-13 03:01:23,297 | INFO     | sum of deviations: 7757140289.2999935
[2025-10-12 23:02:13] 2025-10-13 03:01:23,297 | INFO     | mean x: 1760320526.3
[2025-10-12 23:02:13] 2025-10-13 03:01:23,298 | INFO     | mean y: 2523274.3545454545
[2025-10-12 23:02:13] 2025-10-13 03:01:23,298 | INFO     | -- intersect: -33079601157.95709
[2025-10-12 23:02:13] 2025-10-13 03:01:23,298 | INFO     | intersect: -33079601157.95709
[2025-10-12 23:02:13] 2025-10-13 03:01:23,298 | INFO     | chi2: 1.701210095452509
[2025-10-12 23:02:13] 2025-10-13 03:01:23,303 | INFO     | current chi2=1.701210095452509 (change=-0.17939292655973368 %)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,303 | INFO     | right removable region: 109
[2025-10-12 23:02:13] 2025-10-13 03:01:23,304 | INFO     | sum of square deviations: 471580840.4000002
[2025-10-12 23:02:13] 2025-10-13 03:01:23,304 | INFO     | sum of deviations: -17222420884.199993
[2025-10-12 23:02:13] 2025-10-13 03:01:23,304 | INFO     | mean x: 1760320983.8
[2025-10-12 23:02:13] 2025-10-13 03:01:23,305 | INFO     | mean y: 2546842.7739130436
[2025-10-12 23:02:13] 2025-10-13 03:01:23,305 | INFO     | -- intersect: 64290546432.78564
[2025-10-12 23:02:13] 2025-10-13 03:01:23,305 | INFO     | intersect: 64290546432.78564
[2025-10-12 23:02:13] 2025-10-13 03:01:23,305 | INFO     | chi2: 0.9801838580843522
[2025-10-12 23:02:13] 2025-10-13 03:01:23,305 | INFO     | current chi2=0.9801838580843522 (change=60.58604836247705 %)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,305 | INFO     | sum of square deviations: 412684148.2181828
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | sum of deviations: -14000015738.909092
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | mean x: 1760321136.3272727
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | mean y: 2538332.1363636362
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | -- intersect: 59720178858.24349
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | intersect: 59720178858.24349
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | chi2: 0.9550381184229011
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | current chi2=0.9550381184229011 (change=2.565410504779715 %)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | left removable region: 20
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | sum of square deviations: 218611382.38202274
[2025-10-12 23:02:13] 2025-10-13 03:01:23,306 | INFO     | sum of deviations: 1148323119.0898874
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | mean x: 1760321105.8651686
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | mean y: 2534885.6741573033
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | -- intersect: -9244089882.26418
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | intersect: -9244089882.26418
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | chi2: 0.00028253661075825333
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | -- intersect: -9244089882.26418
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | current memory leak: 5.25 B/s (using 89 data points, chi2=0.00)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | could have reported an average CPU frequency of 2967 MHz (8 samples)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | ..............................
[2025-10-12 23:02:13] 2025-10-13 03:01:23,307 | INFO     | . Timing measurements:
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . get job = 0 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . initial setup = 4 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . payload setup = 17 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . stage-in = 0 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . payload execution = 7283 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . stage-out = 0 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | . log creation = 0 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,308 | INFO     | ..............................
[2025-10-12 23:02:13] 2025-10-13 03:01:23,357 | INFO     | 
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | job summary report
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | --------------------------------------------------
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | PanDA job id: 6840750874
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | task id: 46676269
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | errors: (none)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | pilot state: finished 
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | transexitcode: 0
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | exeerrorcode: 0
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | exeerrordiag: 
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | exitcode: 0
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | exitmsg: OK
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | cpuconsumptiontime: 37910 s
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | nevents: 400
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | neventsw: 0
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | pid: 3015388
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | pgrp: 3015388
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | corecount: 9
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | event service: False
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 16: 2349174, 23: 2349202, 7305: 2376722, 7307: 2385776, 7313: 2385914}
[2025-10-12 23:02:13] 2025-10-13 03:01:23,358 | INFO     | --------------------------------------------------
[2025-10-12 23:02:13] 2025-10-13 03:01:23,359 | INFO     | 
[2025-10-12 23:02:13] 2025-10-13 03:01:23,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | job 6840750874 has completed (purged errors)
[2025-10-12 23:02:13] 2025-10-13 03:01:23,381 | INFO     | overall cleanup function is called
[2025-10-12 23:02:13] 2025-10-13 03:01:24,389 | INFO     | --- collectZombieJob: --- 10, [3015388]
[2025-10-12 23:02:13] 2025-10-13 03:01:24,389 | INFO     | zombie collector waiting for pid 3015388
[2025-10-12 23:02:13] 2025-10-13 03:01:24,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:02:13] 2025-10-13 03:01:24,390 | INFO     | collected zombie processes
[2025-10-12 23:02:13] 2025-10-13 03:01:24,390 | INFO     | will attempt to kill all subprocesses of pid=3015388
[2025-10-12 23:02:13] 2025-10-13 03:01:24,869 | INFO     | process IDs to be killed: [3015388] (in reverse order)
[2025-10-12 23:02:13] 2025-10-13 03:01:24,992 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:02:13] 2025-10-13 03:01:24,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:02:13] 2025-10-13 03:01:25,022 | INFO     | did not find any defunct processes belonging to 3015388
[2025-10-12 23:02:13] 2025-10-13 03:01:25,039 | INFO     | did not find any defunct processes belonging to 3015388
[2025-10-12 23:02:13] 2025-10-13 03:01:25,040 | INFO     | ready for new job
[2025-10-12 23:02:13] 2025-10-13 03:01:25,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:02:13] 2025-10-13 03:01:25,042 | INFO     | ***************************************
[2025-10-12 23:02:13] 2025-10-13 03:01:25,043 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:02:13] 2025-10-13 03:01:25,043 | INFO     | ***************************************
[2025-10-12 23:02:13] 2025-10-13 03:01:25,043 | INFO     | 
[2025-10-12 23:02:13] 2025-10-13 03:01:25,049 | INFO     | architecture information:
[2025-10-12 23:02:13] 2025-10-13 03:01:25,049 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:02:13] 2025-10-13 03:01:25,067 | INFO     | cat /etc/os-release:
[2025-10-12 23:02:13] NAME="CentOS Linux"
[2025-10-12 23:02:13] VERSION="7 (Core)"
[2025-10-12 23:02:13] ID="centos"
[2025-10-12 23:02:13] ID_LIKE="rhel fedora"
[2025-10-12 23:02:13] VERSION_ID="7"
[2025-10-12 23:02:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:02:13] ANSI_COLOR="0;31"
[2025-10-12 23:02:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:02:13] HOME_URL="https://www.centos.org/"
[2025-10-12 23:02:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:02:13] 
[2025-10-12 23:02:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:02:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:02:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:02:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:02:13] 
[2025-10-12 23:02:13] 2025-10-13 03:01:25,067 | INFO     | ***************************************
[2025-10-12 23:02:13] 2025-10-13 03:01:25,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:02:13] 2025-10-13 03:01:25,615 | INFO     | sufficient remaining disk space (127228968960 B)
[2025-10-12 23:02:13] 2025-10-13 03:01:25,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:02:13] 2025-10-13 03:01:25,616 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:02:13] 2025-10-13 03:01:25,616 | INFO     | update_server=False
[2025-10-12 23:02:13] 2025-10-13 03:01:25,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:02:13] 2025-10-13 03:01:25,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:02:13] 2025-10-13 03:01:25,617 | INFO     | aborting loop
[2025-10-12 23:02:13] 2025-10-13 03:01:25,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:02:13] 2025-10-13 03:01:26,230 | INFO     | all data control threads have been joined
[2025-10-12 23:02:13] 2025-10-13 03:01:26,622 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:26,623 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:26,653 | INFO     | all payload control threads have been joined
[2025-10-12 23:02:13] 2025-10-13 03:01:26,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,215 | INFO     | all job control threads have been joined
[2025-10-12 23:02:13] 2025-10-13 03:01:27,228 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,236 | INFO     | [data] control thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,317 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,488 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:02:13] 2025-10-13 03:01:27,623 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,624 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,659 | INFO     | [payload] control thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,917 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:27,982 | INFO     | [job] validate thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:28,221 | INFO     | [job] control thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:28,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:02:13] 2025-10-13 03:01:29,379 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:31,590 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:36,330 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:02:13] 2025-10-13 03:01:37,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:02:13] 2025-10-13 03:01:56,476 | INFO     | PID=3007330 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:02:13] 2025-10-13 03:01:56,477 | INFO     | .. there are 17 such processes running
[2025-10-12 23:02:13] 2025-10-13 03:01:56,478 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:02:13] 2025-10-13 03:01:56,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:02:13] 2025-10-13 03:01:56,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:02:13] 2025-10-13 03:02:06,915 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:02:13] 2025-10-13 03:02:08,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380495546176)>', '<ExcThread(monitor, started 140379118626560)>']
[2025-10-12 23:02:13] 2025-10-13 03:02:08,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:02:13] 2025-10-13 03:02:08,538 | INFO     | [monitor] control thread has ended
[2025-10-12 23:02:13] 2025-10-13 03:02:13,214 | INFO     | all workflow threads have been joined
[2025-10-12 23:02:13] 2025-10-13 03:02:13,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:02:13] 2025-10-13 03:02:13,215 | INFO     | traces error code: 0
[2025-10-12 23:02:13] 2025-10-13 03:02:13,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:02:13] 2025-10-13 03:02:13,538 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:02:13] 2025-10-13 03:02:13,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:02:13] 2025-10-13 03:02:13,562 [wrapper] pilotpid: 3007330
[2025-10-12 23:02:13] 2025-10-13 03:02:13,569 [wrapper] Pilot exit status: 0
[2025-10-12 23:02:13] 2025-10-13 03:02:13,589 [wrapper] pandaids: 6840750874
[2025-10-12 23:02:13] 2025-10-13 03:02:13,704 [wrapper] cleanup supervisor_pilot 3245351 3007331
[2025-10-12 23:02:13] 2025-10-13 03:02:13,710 [wrapper] Test setup, not cleaning
[2025-10-12 23:02:13] 2025-10-13 03:02:13,714 [wrapper] apfmon messages muted
[2025-10-12 23:02:13] 2025-10-13 03:02:13,717 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:02:13] 2025-10-13 03:02:13,720 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:02:13]  *** Error codes and diagnostics ***
[2025-10-12 23:02:13]     "exeErrorCode": 0,
[2025-10-12 23:02:13]     "exeErrorDiag": "",
[2025-10-12 23:02:13]     "pilotErrorCode": 0,
[2025-10-12 23:02:13]     "pilotErrorDiag": "",
[2025-10-12 23:02:13]  *** Listing of results directory ***
[2025-10-12 23:02:13] total 411928
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:31 queuedata.json
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-12 23:02:13] -rwx------. 1 boincer umatlas     36292 Oct 12 17:32 runpilot2-wrapper.sh
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:02:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:58 run_atlas
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:58 job.xml
[2025-10-12 23:02:13] -rw-r--r--. 2 boincer umatlas 219833049 Oct 12 20:58 EVNT.46676267._004836.pool.root.1
[2025-10-12 23:02:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:58 start_atlas.sh
[2025-10-12 23:02:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:58 shared
[2025-10-12 23:02:13] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 20:58 input.tar.gz
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:58 boinc_lockfile
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 20:58 pandaJob.out
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas    975603 Oct 12 20:58 agis_schedconf.cvmfs.json
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:02:13] drwx------. 5 boincer umatlas      4096 Oct 12 20:58 pilot3
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas      6946 Oct 12 22:54 init_data.xml
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas 195245808 Oct 12 23:00 HITS.46676269._090093.pool.root.1
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:00 boinc_task_state.xml
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas      1046 Oct 12 23:01 memory_monitor_summary.json
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas    394100 Oct 12 23:01 log.46676269._090093.job.log.tgz.1
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas      7794 Oct 12 23:01 heartbeat.json
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas        95 Oct 12 23:01 pilot_heartbeat.json
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:02 wrapper_checkpoint.txt
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:02 boinc_mmap_file
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas      4897 Oct 12 23:02 pilotlog.txt
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas   1017162 Oct 12 23:02 log.46676269._090093.job.log.1
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas       357 Oct 12 23:02 output.list
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:02 runtime_log
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas   1433600 Oct 12 23:02 result.tar.gz
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 23:02 runtime_log.err
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas       656 Oct 12 23:02 ovSKDmbrIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNhlNDmchhQQm.diag
[2025-10-12 23:02:13] -rw-r--r--. 1 boincer umatlas     20942 Oct 12 23:02 stderr.txt
[2025-10-12 23:02:13] HITS file was successfully produced:
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas 195245808 Oct 12 23:00 shared/HITS.pool.root.1
[2025-10-12 23:02:13]  *** Contents of shared directory: ***
[2025-10-12 23:02:13] total 407340
[2025-10-12 23:02:13] -rw-r--r--. 2 boincer umatlas 219833049 Oct 12 20:58 ATLAS.root_0
[2025-10-12 23:02:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:58 start_atlas.sh
[2025-10-12 23:02:13] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 20:58 input.tar.gz
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas 195245808 Oct 12 23:00 HITS.pool.root.1
[2025-10-12 23:02:13] -rw-------. 1 boincer umatlas   1433600 Oct 12 23:02 result.tar.gz
23:02:15 (3003333): run_atlas exited; CPU time 37994.642389
23:02:15 (3003333): called boinc_finish(0)

</stderr_txt>
]]>

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