Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:09:42 (1822759): wrapper (7.7.26015): starting
19:09:42 (1822759): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:09:42] Arguments: --nthreads 8
[2025-10-12 19:09:42] Threads: 8
[2025-10-12 19:09:42] Checking for CVMFS
[2025-10-12 19:09:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:09:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:09:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:09:43] 2.13.2.0 2935877 124591 615596 151640 3 792 32730916 40960000 58455 16776704 0 578896642 99.771 352070379 17515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:09:43] CVMFS is ok
[2025-10-12 19:09:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:09:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:09:43] Further information can be found at the LHC@home message board.
[2025-10-12 19:09:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:09:43] Checking for apptainer binary...
[2025-10-12 19:09:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:09:43] Running /usr/bin/apptainer --version
[2025-10-12 19:09:43] apptainer version 1.4.3-1.el9
[2025-10-12 19:09:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:09:44] c7-2-17.aglt2.org
[2025-10-12 19:09:44] apptainer works
[2025-10-12 19:09:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:09:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:09:44] Starting ATLAS job with PandaID=6840713318
[2025-10-12 19:09:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:58:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:58:34] 2025-10-13 01:57:56,718 | INFO     | chi2: 3.155824225623396
[2025-10-12 21:58:34] 2025-10-13 01:57:56,718 | INFO     | sum of square deviations: 1199939541.9745193
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | sum of deviations: 47567837802.54137
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | mean x: 1760315537.012739
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | mean y: 2090111.229299363
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | -- intersect: -69780095588.00119
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | intersect: -69780095588.00119
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | chi2: 3.1503725460037484
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | current chi2=3.1503725460037484 (change=0.17274978673980573 %)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,727 | INFO     | right removable region: 156
[2025-10-12 21:58:34] 2025-10-13 01:57:56,728 | INFO     | sum of square deviations: 1199938321.9745193
[2025-10-12 21:58:34] 2025-10-13 01:57:56,728 | INFO     | sum of deviations: 11499775857.426762
[2025-10-12 21:58:34] 2025-10-13 01:57:56,728 | INFO     | mean x: 1760315842.012739
[2025-10-12 21:58:34] 2025-10-13 01:57:56,728 | INFO     | mean y: 2138210.286624204
[2025-10-12 21:58:34] 2025-10-13 01:57:56,729 | INFO     | -- intersect: -16868093576.388344
[2025-10-12 21:58:34] 2025-10-13 01:57:56,729 | INFO     | intersect: -16868093576.388344
[2025-10-12 21:58:34] 2025-10-13 01:57:56,729 | INFO     | chi2: 0.2217779694141696
[2025-10-12 21:58:34] 2025-10-13 01:57:56,729 | INFO     | current chi2=0.2217779694141696 (change=92.97242325432875 %)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,729 | INFO     | sum of square deviations: 1088903071.9736817
[2025-10-12 21:58:34] 2025-10-13 01:57:56,730 | INFO     | sum of deviations: 4832264361.118422
[2025-10-12 21:58:34] 2025-10-13 01:57:56,730 | INFO     | mean x: 1760315994.5131578
[2025-10-12 21:58:34] 2025-10-13 01:57:56,730 | INFO     | mean y: 2147197.1907894737
[2025-10-12 21:58:34] 2025-10-13 01:57:56,730 | INFO     | -- intersect: -7809670459.98105
[2025-10-12 21:58:34] 2025-10-13 01:57:56,730 | INFO     | intersect: -7809670459.98105
[2025-10-12 21:58:34] 2025-10-13 01:57:56,748 | INFO     | chi2: 0.052706200282641995
[2025-10-12 21:58:34] 2025-10-13 01:57:56,749 | INFO     | current chi2=0.052706200282641995 (change=76.2346997666782 %)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,749 | INFO     | sum of square deviations: 984937721.9727925
[2025-10-12 21:58:34] 2025-10-13 01:57:56,749 | INFO     | sum of deviations: 5065609722.027209
[2025-10-12 21:58:34] 2025-10-13 01:57:56,749 | INFO     | mean x: 1760316147.0136054
[2025-10-12 21:58:34] 2025-10-13 01:57:56,750 | INFO     | mean y: 2146913.9863945576
[2025-10-12 21:58:34] 2025-10-13 01:57:56,750 | INFO     | -- intersect: -9051293104.833311
[2025-10-12 21:58:34] 2025-10-13 01:57:56,750 | INFO     | intersect: -9051293104.833311
[2025-10-12 21:58:34] 2025-10-13 01:57:56,750 | INFO     | chi2: 0.03813419352210315
[2025-10-12 21:58:34] 2025-10-13 01:57:56,750 | INFO     | current chi2=0.03813419352210315 (change=27.64761390954969 %)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,750 | INFO     | sum of square deviations: 887818553.4929576
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | sum of deviations: 3884804581.1408443
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | mean x: 1760316299.5070422
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | mean y: 2148770.3591549294
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | -- intersect: -7700421532.634745
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | intersect: -7700421532.634745
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | chi2: 0.03652104684695617
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | current chi2=0.03652104684695617 (change=4.230184320567766 %)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | left removable region: 40
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | sum of square deviations: 483975708.9913803
[2025-10-12 21:58:34] 2025-10-13 01:57:56,751 | INFO     | sum of deviations: 2579620264.215517
[2025-10-12 21:58:34] 2025-10-13 01:57:56,752 | INFO     | mean x: 1760316726.5086207
[2025-10-12 21:58:34] 2025-10-13 01:57:56,752 | INFO     | mean y: 2155066.2844827585
[2025-10-12 21:58:34] 2025-10-13 01:57:56,752 | INFO     | -- intersect: -9380441239.22563
[2025-10-12 21:58:34] 2025-10-13 01:57:56,752 | INFO     | intersect: -9380441239.22563
[2025-10-12 21:58:34] 2025-10-13 01:57:56,752 | INFO     | chi2: 0.02527946525187431
[2025-10-12 21:58:34] 2025-10-13 01:57:56,752 | INFO     | -- intersect: -9380441239.22563
[2025-10-12 21:58:34] 2025-10-13 01:57:56,760 | INFO     | current memory leak: 5.33 B/s (using 116 data points, chi2=0.03)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | could have reported an average CPU frequency of 3542 MHz (9 samples)
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | ..............................
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . Timing measurements:
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . get job = 0 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . initial setup = 7 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . payload setup = 43 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . stage-in = 0 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . payload execution = 9890 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . stage-out = 3 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | . log creation = 1 s
[2025-10-12 21:58:34] 2025-10-13 01:57:56,761 | INFO     | ..............................
[2025-10-12 21:58:34] 2025-10-13 01:57:57,054 | INFO     | 
[2025-10-12 21:58:34] 2025-10-13 01:57:57,054 | INFO     | job summary report
[2025-10-12 21:58:34] 2025-10-13 01:57:57,054 | INFO     | --------------------------------------------------
[2025-10-12 21:58:34] 2025-10-13 01:57:57,054 | INFO     | PanDA job id: 6840713318
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | task id: 46676269
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | errors: (none)
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | pilot state: finished 
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | transexitcode: 0
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | exeerrorcode: 0
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | exeerrordiag: 
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | exitcode: 0
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | exitmsg: OK
[2025-10-12 21:58:34] 2025-10-13 01:57:57,055 | INFO     | cpuconsumptiontime: 28706 s
[2025-10-12 21:58:34] 2025-10-13 01:57:57,105 | INFO     | nevents: 400
[2025-10-12 21:58:34] 2025-10-13 01:57:57,105 | INFO     | neventsw: 0
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | pid: 1846326
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | pgrp: 1846326
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | corecount: 8
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | event service: False
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 13: 2348862, 24: 2348918, 31: 2349208, 35: 2349364, 9939: 2377684, 9940: 2377683, 9945: 2386737, 9946: 2386793, 9964: 2
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | --------------------------------------------------
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | 
[2025-10-12 21:58:34] 2025-10-13 01:57:57,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 21:58:34] 2025-10-13 01:57:57,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | job 6840713318 has completed (purged errors)
[2025-10-12 21:58:34] 2025-10-13 01:57:57,320 | INFO     | overall cleanup function is called
[2025-10-12 21:58:34] 2025-10-13 01:57:58,393 | INFO     | --- collectZombieJob: --- 10, [1846326]
[2025-10-12 21:58:34] 2025-10-13 01:57:58,393 | INFO     | zombie collector waiting for pid 1846326
[2025-10-12 21:58:34] 2025-10-13 01:57:58,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:58:34] 2025-10-13 01:57:58,393 | INFO     | collected zombie processes
[2025-10-12 21:58:34] 2025-10-13 01:57:58,393 | INFO     | will attempt to kill all subprocesses of pid=1846326
[2025-10-12 21:58:34] 2025-10-13 01:57:59,364 | INFO     | PID=1833104 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 21:58:34] 2025-10-13 01:57:59,377 | INFO     | .. there are 86 such processes running
[2025-10-12 21:58:34] 2025-10-13 01:57:59,547 | INFO     | process IDs to be killed: [1846326] (in reverse order)
[2025-10-12 21:58:34] 2025-10-13 01:57:59,778 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:58:34] 2025-10-13 01:57:59,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:58:34] 2025-10-13 01:57:59,952 | INFO     | did not find any defunct processes belonging to 1846326
[2025-10-12 21:58:34] 2025-10-13 01:58:00,063 | INFO     | did not find any defunct processes belonging to 1846326
[2025-10-12 21:58:34] 2025-10-13 01:58:00,064 | INFO     | ready for new job
[2025-10-12 21:58:34] 2025-10-13 01:58:00,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:58:34] 2025-10-13 01:58:00,065 | INFO     | ***************************************
[2025-10-12 21:58:34] 2025-10-13 01:58:00,065 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:58:34] 2025-10-13 01:58:00,065 | INFO     | ***************************************
[2025-10-12 21:58:34] 2025-10-13 01:58:00,065 | INFO     | 
[2025-10-12 21:58:34] 2025-10-13 01:58:00,113 | INFO     | architecture information:
[2025-10-12 21:58:34] 2025-10-13 01:58:00,117 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:58:34] 2025-10-13 01:58:00,385 | INFO     | cat /etc/os-release:
[2025-10-12 21:58:34] NAME="CentOS Linux"
[2025-10-12 21:58:34] VERSION="7 (Core)"
[2025-10-12 21:58:34] ID="centos"
[2025-10-12 21:58:34] ID_LIKE="rhel fedora"
[2025-10-12 21:58:34] VERSION_ID="7"
[2025-10-12 21:58:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:58:34] ANSI_COLOR="0;31"
[2025-10-12 21:58:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:58:34] HOME_URL="https://www.centos.org/"
[2025-10-12 21:58:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:58:34] 
[2025-10-12 21:58:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:58:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:58:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:58:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:58:34] 
[2025-10-12 21:58:34] 2025-10-13 01:58:00,386 | INFO     | ***************************************
[2025-10-12 21:58:34] 2025-10-13 01:58:00,889 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 21:58:34] 2025-10-13 01:58:00,997 | INFO     | sufficient remaining disk space (126672175104 B)
[2025-10-12 21:58:34] 2025-10-13 01:58:00,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:58:34] 2025-10-13 01:58:00,998 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:58:34] 2025-10-13 01:58:00,998 | INFO     | update_server=False
[2025-10-12 21:58:34] 2025-10-13 01:58:00,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:58:34] 2025-10-13 01:58:01,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:58:34] 2025-10-13 01:58:01,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:58:34] 2025-10-13 01:58:01,532 | INFO     | aborting loop
[2025-10-12 21:58:34] 2025-10-13 01:58:01,759 | INFO     | all data control threads have been joined
[2025-10-12 21:58:34] 2025-10-13 01:58:02,004 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:02,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:58:34] 2025-10-13 01:58:02,508 | INFO     | all payload control threads have been joined
[2025-10-12 21:58:34] 2025-10-13 01:58:02,535 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:02,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:02,543 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:02,578 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:02,701 | INFO     | all job control threads have been joined
[2025-10-12 21:58:34] 2025-10-13 01:58:02,765 | INFO     | [data] control thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,059 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,064 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,074 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:58:34] 2025-10-13 01:58:03,154 | INFO     | [job] validate thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,155 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,516 | INFO     | [payload] control thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,582 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,591 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:03,706 | INFO     | [job] control thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:07,103 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:58:34] 2025-10-13 01:58:11,797 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:58:34] 2025-10-13 01:58:11,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124248115008)>', '<ExcThread(monitor, started 140123727435520)>']
[2025-10-12 21:58:34] 2025-10-13 01:58:16,900 | INFO     | all workflow threads have been joined
[2025-10-12 21:58:34] 2025-10-13 01:58:16,900 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:58:34] 2025-10-13 01:58:16,901 | INFO     | traces error code: 0
[2025-10-12 21:58:34] 2025-10-13 01:58:16,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | INFO     | PID=1833104 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | INFO     | .. there are 86 such processes running
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:58:34] 2025-10-13 01:58:32,909 | INFO     | [monitor] control thread has ended
[2025-10-12 21:58:34] 2025-10-13 01:58:33,683 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:58:34] 2025-10-13 01:58:33,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:58:34] 2025-10-13 01:58:33,697 [wrapper] pilotpid: 1833104
[2025-10-12 21:58:34] 2025-10-13 01:58:33,702 [wrapper] Pilot exit status: 0
[2025-10-12 21:58:34] 2025-10-13 01:58:33,796 [wrapper] pandaids: 6840713318
[2025-10-12 21:58:34] 2025-10-13 01:58:34,007 [wrapper] cleanup supervisor_pilot 3293852 1833105
[2025-10-12 21:58:34] 2025-10-13 01:58:34,019 [wrapper] Test setup, not cleaning
[2025-10-12 21:58:34] 2025-10-13 01:58:34,021 [wrapper] apfmon messages muted
[2025-10-12 21:58:34] 2025-10-13 01:58:34,026 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:58:34] 2025-10-13 01:58:34,037 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:58:34]  *** Error codes and diagnostics ***
[2025-10-12 21:58:34]     "exeErrorCode": 0,
[2025-10-12 21:58:34]     "exeErrorDiag": "",
[2025-10-12 21:58:34]     "pilotErrorCode": 0,
[2025-10-12 21:58:34]     "pilotErrorDiag": "",
[2025-10-12 21:58:34]  *** Listing of results directory ***
[2025-10-12 21:58:34] total 412748
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:35 queuedata.json
[2025-10-12 21:58:34] -rwx------. 1 boincer umatlas     36292 Oct 12 15:35 runpilot2-wrapper.sh
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:58:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:09 run_atlas
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:09 job.xml
[2025-10-12 21:58:34] -rw-r--r--. 2 boincer umatlas 224040375 Oct 12 19:09 EVNT.46676267._004460.pool.root.1
[2025-10-12 21:58:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:09 start_atlas.sh
[2025-10-12 21:58:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:09 shared
[2025-10-12 21:58:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 19:09 input.tar.gz
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:09 boinc_lockfile
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 19:09 pandaJob.out
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas    975603 Oct 12 19:10 agis_schedconf.cvmfs.json
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:58:34] drwx------. 5 boincer umatlas      4096 Oct 12 19:10 pilot3
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas      6937 Oct 12 21:55 init_data.xml
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas 191560126 Oct 12 21:56 HITS.46676269._087640.pool.root.1
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas       530 Oct 12 21:56 boinc_task_state.xml
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas      1035 Oct 12 21:57 memory_monitor_summary.json
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas    387417 Oct 12 21:57 log.46676269._087640.job.log.tgz.1
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas        95 Oct 12 21:57 pilot_heartbeat.json
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas      7772 Oct 12 21:57 heartbeat.json
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:58 wrapper_checkpoint.txt
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas       823 Oct 12 21:58 pilotlog.txt
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:58 boinc_mmap_file
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas   1186620 Oct 12 21:58 log.46676269._087640.job.log.1
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas       357 Oct 12 21:58 output.list
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:58 runtime_log
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas   1597440 Oct 12 21:58 result.tar.gz
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 21:58 runtime_log.err
[2025-10-12 21:58:34] -rw-------. 1 boincer umatlas       653 Oct 12 21:58 42vKDmM2GS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHIlNDmv8eeDo.diag
[2025-10-12 21:58:34] -rw-r--r--. 1 boincer umatlas     20928 Oct 12 21:58 stderr.txt
[2025-10-12 21:58:54] HITS file was successfully produced:
[2025-10-12 21:58:54] -rw-------. 1 boincer umatlas 191560126 Oct 12 21:56 shared/HITS.pool.root.1
[2025-10-12 21:58:54]  *** Contents of shared directory: ***
[2025-10-12 21:58:54] total 408008
[2025-10-12 21:58:54] -rw-r--r--. 2 boincer umatlas 224040375 Oct 12 19:09 ATLAS.root_0
[2025-10-12 21:58:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:09 start_atlas.sh
[2025-10-12 21:58:54] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 19:09 input.tar.gz
[2025-10-12 21:58:54] -rw-------. 1 boincer umatlas 191560126 Oct 12 21:56 HITS.pool.root.1
[2025-10-12 21:58:54] -rw-------. 1 boincer umatlas   1597440 Oct 12 21:58 result.tar.gz
21:58:56 (1822759): run_atlas exited; CPU time 29148.730714
21:58:56 (1822759): called boinc_finish(0)

</stderr_txt>
]]>

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