Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:38:33 (1295610): wrapper (7.7.26015): starting
09:38:33 (1295610): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:38:33] Arguments: --nthreads 3
[2025-10-13 09:38:33] Threads: 3
[2025-10-13 09:38:33] Checking for CVMFS
[2025-10-13 09:38:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:38:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:38:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:38:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:38:33] 2.9.2.0 3005 4207 84312 151653 2 56 29514274 36864001 0 130560 0 3412881 99.991 150853 871 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:38:33] CVMFS is ok
[2025-10-13 09:38:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:38:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:38:33] Further information can be found at the LHC@home message board.
[2025-10-13 09:38:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:38:33] Checking for apptainer binary...
[2025-10-13 09:38:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:38:33] Running /usr/bin/apptainer --version
[2025-10-13 09:38:33] apptainer version 1.4.1-1.1
[2025-10-13 09:38:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:38:33] thA335b
[2025-10-13 09:38:33] apptainer works
[2025-10-13 09:38:33] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:38:33] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:38:33] Starting ATLAS job with PandaID=6840713370
[2025-10-13 09:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:56:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:56:50] 2025-10-13 08:55:56,063 | INFO     | [payload] control thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,072 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,180 | INFO     | all job control threads have been joined
[2025-10-13 10:56:50] 2025-10-13 08:55:56,184 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,185 | INFO     | [job] validate thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,199 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,235 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:56:50] 2025-10-13 08:55:56,691 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,711 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,751 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:56,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:57,181 | INFO     | [job] control thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:55:58,005 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:56:00,256 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:56:50] 2025-10-13 08:56:25,382 | INFO     | PID=1299331 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:56:50] 2025-10-13 08:56:25,383 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:56:50] 2025-10-13 08:56:25,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:56:50] 2025-10-13 08:56:25,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:56:50] 2025-10-13 08:56:44,516 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:56:50] 2025-10-13 08:56:45,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143034120000)>', '<ExcThread(monitor, started 140142023010048)>']
[2025-10-13 10:56:50] 2025-10-13 08:56:45,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:56:50] 2025-10-13 08:56:45,485 | INFO     | [monitor] control thread has ended
[2025-10-13 10:56:50] 2025-10-13 08:56:50,191 | INFO     | all workflow threads have been joined
[2025-10-13 10:56:50] 2025-10-13 08:56:50,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:56:50] 2025-10-13 08:56:50,192 | INFO     | traces error code: 0
[2025-10-13 10:56:50] 2025-10-13 08:56:50,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:56:50] 2025-10-13 08:56:50,240 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:56:50] 2025-10-13 08:56:50,242 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:56:50] 2025-10-13 08:56:50,244 [wrapper] pilotpid: 1299331
[2025-10-13 10:56:50] 2025-10-13 08:56:50,246 [wrapper] Pilot exit status: 0
[2025-10-13 10:56:50] 2025-10-13 08:56:50,254 [wrapper] pandaids: 6840713370
[2025-10-13 10:56:50] 2025-10-13 08:56:50,269 [wrapper] cleanup supervisor_pilot 1317531 1299332
[2025-10-13 10:56:50] 2025-10-13 08:56:50,272 [wrapper] Test setup, not cleaning
[2025-10-13 10:56:50] 2025-10-13 08:56:50,274 [wrapper] apfmon messages muted
[2025-10-13 10:56:50] 2025-10-13 08:56:50,276 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:56:50] 2025-10-13 08:56:50,278 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:56:50]  *** Error codes and diagnostics ***
[2025-10-13 10:56:50]     "exeErrorCode": 0,
[2025-10-13 10:56:50]     "exeErrorDiag": "",
[2025-10-13 10:56:50]     "pilotErrorCode": 0,
[2025-10-13 10:56:50]     "pilotErrorDiag": "",
[2025-10-13 10:56:50]  *** Listing of results directory ***
[2025-10-13 10:56:50] total 405700
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:39 queuedata.json
[2025-10-13 10:56:50] -rwx------ 1 boinc boinc     36292 Oct 12 21:40 runpilot2-wrapper.sh
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:56:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:38 run_atlas
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:38 job.xml
[2025-10-13 10:56:50] -rw-r--r-- 2 boinc boinc 220093146 Oct 13 09:38 EVNT.46676267._004462.pool.root.1
[2025-10-13 10:56:50] -rw-r--r-- 2 boinc boinc    569681 Oct 13 09:38 input.tar.gz
[2025-10-13 10:56:50] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:38 start_atlas.sh
[2025-10-13 10:56:50] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:38 shared
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:38 boinc_setup_complete
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc      6445 Oct 13 09:38 init_data.xml
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:38 boinc_lockfile
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:38 pandaJob.out
[2025-10-13 10:56:50] -rw------- 1 boinc boinc    972849 Oct 13 09:38 agis_schedconf.cvmfs.json
[2025-10-13 10:56:50] -rw------- 1 boinc boinc   1560580 Oct 13 09:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:56:50] drwx------ 5 boinc boinc      4096 Oct 13 09:38 pilot3
[2025-10-13 10:56:50] -rw------- 1 boinc boinc 189589154 Oct 13 10:55 HITS.46676269._087692.pool.root.1
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:55 boinc_task_state.xml
[2025-10-13 10:56:50] -rw------- 1 boinc boinc      1017 Oct 13 10:55 memory_monitor_summary.json
[2025-10-13 10:56:50] -rw------- 1 boinc boinc    247819 Oct 13 10:55 log.46676269._087692.job.log.tgz.1
[2025-10-13 10:56:50] -rw------- 1 boinc boinc      7756 Oct 13 10:55 heartbeat.json
[2025-10-13 10:56:50] -rw------- 1 boinc boinc        95 Oct 13 10:56 pilot_heartbeat.json
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:56 boinc_mmap_file
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:56 wrapper_checkpoint.txt
[2025-10-13 10:56:50] -rw------- 1 boinc boinc      4752 Oct 13 10:56 pilotlog.txt
[2025-10-13 10:56:50] -rw------- 1 boinc boinc    684326 Oct 13 10:56 log.46676269._087692.job.log.1
[2025-10-13 10:56:50] -rw------- 1 boinc boinc       357 Oct 13 10:56 output.list
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:56 runtime_log
[2025-10-13 10:56:50] -rw------- 1 boinc boinc    952320 Oct 13 10:56 result.tar.gz
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc      8782 Oct 13 10:56 runtime_log.err
[2025-10-13 10:56:50] -rw------- 1 boinc boinc       659 Oct 13 10:56 0oiNDms6GS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuIlNDmdqbxxn.diag
[2025-10-13 10:56:50] -rw-r--r-- 1 boinc boinc      6242 Oct 13 10:56 stderr.txt
[2025-10-13 10:56:50] HITS file was successfully produced:
[2025-10-13 10:56:50] -rw------- 1 boinc boinc 189589154 Oct 13 10:55 shared/HITS.pool.root.1
[2025-10-13 10:56:50]  *** Contents of shared directory: ***
[2025-10-13 10:56:50] total 401600
[2025-10-13 10:56:50] -rw-r--r-- 2 boinc boinc 220093146 Oct 13 09:38 ATLAS.root_0
[2025-10-13 10:56:50] -rw-r--r-- 2 boinc boinc    569681 Oct 13 09:38 input.tar.gz
[2025-10-13 10:56:50] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:38 start_atlas.sh
[2025-10-13 10:56:50] -rw------- 1 boinc boinc 189589154 Oct 13 10:55 HITS.pool.root.1
[2025-10-13 10:56:50] -rw------- 1 boinc boinc    952320 Oct 13 10:56 result.tar.gz
10:56:51 (1295610): run_atlas exited; CPU time 13248.818619
10:56:51 (1295610): called boinc_finish(0)

</stderr_txt>
]]>

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