Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:29 (3251654): wrapper (7.7.26015): starting
11:37:29 (3251654): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 11:37:29] Arguments: --nthreads 3
[2025-10-13 11:37:29] Threads: 3
[2025-10-13 11:37:29] Checking for CVMFS
[2025-10-13 11:37:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:37:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:37:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:37:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:37:29] 2.9.2.0 1621947 5473 86800 151656 1 56 24378665 36864000 0 130560 0 4260975 99.987 315962 1166 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:37:29] CVMFS is ok
[2025-10-13 11:37:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:37:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:37:29] Further information can be found at the LHC@home message board.
[2025-10-13 11:37:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:37:29] Checking for apptainer binary...
[2025-10-13 11:37:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:37:29] Running /usr/bin/apptainer --version
[2025-10-13 11:37:29] apptainer version 1.4.1-1.1
[2025-10-13 11:37:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:37:29] thA305
[2025-10-13 11:37:29] apptainer works
[2025-10-13 11:37:29] Set ATHENA_PROC_NUMBER=3
[2025-10-13 11:37:29] Set ATHENA_CORE_NUMBER=3
[2025-10-13 11:37:29] Starting ATLAS job with PandaID=6840081644
[2025-10-13 11:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:00:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:00:47] 2025-10-13 11:00:09,381 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:00:47] 2025-10-13 11:00:09,799 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:00:47] 2025-10-13 11:00:11,929 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:00:47] 2025-10-13 11:00:17,856 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:00:47] 2025-10-13 11:00:18,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:00:47] 2025-10-13 11:00:37,881 | INFO     | PID=3255373 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:00:47] 2025-10-13 11:00:37,881 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:00:47] 2025-10-13 11:00:37,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:00:47] 2025-10-13 11:00:37,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:00:47] 2025-10-13 11:00:40,343 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:00:47] 2025-10-13 11:00:42,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995206817600)>', '<ExcThread(monitor, started 139994576443136)>']
[2025-10-13 13:00:47] 2025-10-13 11:00:42,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:00:47] 2025-10-13 11:00:42,908 | INFO     | [monitor] control thread has ended
[2025-10-13 13:00:47] 2025-10-13 11:00:47,364 | INFO     | all workflow threads have been joined
[2025-10-13 13:00:47] 2025-10-13 11:00:47,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:00:47] 2025-10-13 11:00:47,364 | INFO     | traces error code: 0
[2025-10-13 13:00:47] 2025-10-13 11:00:47,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:00:47] 2025-10-13 11:00:47,417 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:00:47] 2025-10-13 11:00:47,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:00:47] 2025-10-13 11:00:47,422 [wrapper] pilotpid: 3255373
[2025-10-13 13:00:47] 2025-10-13 11:00:47,424 [wrapper] Pilot exit status: 0
[2025-10-13 13:00:47] 2025-10-13 11:00:47,431 [wrapper] pandaids: 6840081644
[2025-10-13 13:00:47] 2025-10-13 11:00:47,448 [wrapper] cleanup supervisor_pilot 3273684 3255374
[2025-10-13 13:00:47] 2025-10-13 11:00:47,450 [wrapper] Test setup, not cleaning
[2025-10-13 13:00:47] 2025-10-13 11:00:47,452 [wrapper] apfmon messages muted
[2025-10-13 13:00:47] 2025-10-13 11:00:47,454 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:00:47] 2025-10-13 11:00:47,457 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:00:47]  *** Error codes and diagnostics ***
[2025-10-13 13:00:47]     "exeErrorCode": 0,
[2025-10-13 13:00:47]     "exeErrorDiag": "",
[2025-10-13 13:00:47]     "pilotErrorCode": 0,
[2025-10-13 13:00:47]     "pilotErrorDiag": "",
[2025-10-13 13:00:47]  *** Listing of results directory ***
[2025-10-13 13:00:47] total 407420
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 13:00:47] -rwx------ 1 boinc boinc     36292 Oct 12 15:44 runpilot2-wrapper.sh
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:44 queuedata.json
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:00:47] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:37 run_atlas
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:37 job.xml
[2025-10-13 13:00:47] -rw-r--r-- 2 boinc boinc 219506996 Oct 13 11:37 EVNT.46676267._004033.pool.root.1
[2025-10-13 13:00:47] -rw-r--r-- 2 boinc boinc    569677 Oct 13 11:37 input.tar.gz
[2025-10-13 13:00:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:37 start_atlas.sh
[2025-10-13 13:00:47] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:37 shared
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:37 boinc_setup_complete
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc      6439 Oct 13 11:37 init_data.xml
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:37 boinc_lockfile
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc      2550 Oct 13 11:37 pandaJob.out
[2025-10-13 13:00:47] -rw------- 1 boinc boinc    972849 Oct 13 11:37 agis_schedconf.cvmfs.json
[2025-10-13 13:00:47] -rw------- 1 boinc boinc   1560580 Oct 13 11:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:00:47] drwx------ 5 boinc boinc      4096 Oct 13 11:37 pilot3
[2025-10-13 13:00:47] -rw------- 1 boinc boinc 191853240 Oct 13 12:59 HITS.46676269._079799.pool.root.1
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc       530 Oct 13 12:59 boinc_task_state.xml
[2025-10-13 13:00:47] -rw------- 1 boinc boinc      1017 Oct 13 12:59 memory_monitor_summary.json
[2025-10-13 13:00:47] -rw------- 1 boinc boinc    248837 Oct 13 12:59 log.46676269._079799.job.log.tgz.1
[2025-10-13 13:00:47] -rw------- 1 boinc boinc        95 Oct 13 13:00 pilot_heartbeat.json
[2025-10-13 13:00:47] -rw------- 1 boinc boinc      7764 Oct 13 13:00 heartbeat.json
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:00 wrapper_checkpoint.txt
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:00 boinc_mmap_file
[2025-10-13 13:00:47] -rw------- 1 boinc boinc      4824 Oct 13 13:00 pilotlog.txt
[2025-10-13 13:00:47] -rw------- 1 boinc boinc    725626 Oct 13 13:00 log.46676269._079799.job.log.1
[2025-10-13 13:00:47] -rw------- 1 boinc boinc       357 Oct 13 13:00 output.list
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:00 runtime_log
[2025-10-13 13:00:47] -rw------- 1 boinc boinc    993280 Oct 13 13:00 result.tar.gz
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc      8777 Oct 13 13:00 runtime_log.err
[2025-10-13 13:00:47] -rw------- 1 boinc boinc       658 Oct 13 13:00 rruKDmaYBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ4jNDmMq88nn.diag
[2025-10-13 13:00:47] -rw-r--r-- 1 boinc boinc      5215 Oct 13 13:00 stderr.txt
[2025-10-13 13:00:47] HITS file was successfully produced:
[2025-10-13 13:00:47] -rw------- 1 boinc boinc 191853240 Oct 13 12:59 shared/HITS.pool.root.1
[2025-10-13 13:00:47]  *** Contents of shared directory: ***
[2025-10-13 13:00:47] total 403280
[2025-10-13 13:00:47] -rw-r--r-- 2 boinc boinc 219506996 Oct 13 11:37 ATLAS.root_0
[2025-10-13 13:00:47] -rw-r--r-- 2 boinc boinc    569677 Oct 13 11:37 input.tar.gz
[2025-10-13 13:00:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:37 start_atlas.sh
[2025-10-13 13:00:47] -rw------- 1 boinc boinc 191853240 Oct 13 12:59 HITS.pool.root.1
[2025-10-13 13:00:47] -rw------- 1 boinc boinc    993280 Oct 13 13:00 result.tar.gz
13:00:48 (3251654): run_atlas exited; CPU time 14131.391440
13:00:48 (3251654): called boinc_finish(0)

</stderr_txt>
]]>

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