Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:06:24 (22690): wrapper (7.7.26015): starting
19:06:24 (22690): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 19:06:24] Arguments: --nthreads 12
[2025-10-12 19:06:24] Threads: 12
[2025-10-12 19:06:24] Checking for CVMFS
[2025-10-12 19:06:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:06:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:06:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:06:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:06:25] 2.11.2.0 30551 53461 87436 151640 1 59 14753117 20275200 1 130560 0 31118871 99.958 2417548 39848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:06:25] CVMFS is ok
[2025-10-12 19:06:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:06:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:06:25] Further information can be found at the LHC@home message board.
[2025-10-12 19:06:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:06:25] Checking for apptainer binary...
[2025-10-12 19:06:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:06:25] Running /usr/bin/apptainer --version
[2025-10-12 19:06:25] apptainer version 1.3.2-1.el7
[2025-10-12 19:06:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:06:26] c-205-16.aglt2.org
[2025-10-12 19:06:26] apptainer works
[2025-10-12 19:06:26] Set ATHENA_PROC_NUMBER=12
[2025-10-12 19:06:26] Set ATHENA_CORE_NUMBER=12
[2025-10-12 19:06:26] Starting ATLAS job with PandaID=6840428936
[2025-10-12 19:06:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:22:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:22:55]  status_code=0
[2025-10-12 20:22:55]  storage_token=
[2025-10-12 20:22:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840428936/log.46676269._084520.job.log.tgz.1
[2025-10-12 20:22:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/c2/log.46676269._084520.job.log.tgz.1
[2025-10-12 20:22:55]  workdir=None
[2025-10-12 20:22:55] ]
[2025-10-12 20:22:55] 2025-10-13 00:21:47,976 | INFO     | transferring file log.46676269._084520.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840428936/log.46676269._084520.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 20:22:55] 2025-10-13 00:21:47,977 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840428936/log.46676269._084520.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._084520.job
[2025-10-12 20:22:55] 2025-10-13 00:21:47,998 | INFO     | adding to output.list: log.46676269._084520.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/c2/log.46676269._084520.job.log.tg
[2025-10-12 20:22:55] 2025-10-13 00:21:47,999 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:22:55] 2025-10-13 00:21:47,999 | INFO     | summary of transferred files:
[2025-10-12 20:22:55] 2025-10-13 00:21:47,999 | INFO     |  -- lfn=log.46676269._084520.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:22:55] 2025-10-13 00:21:47,999 | INFO     | stage-out finished correctly
[2025-10-12 20:22:55] 2025-10-13 00:21:48,178 | INFO     | PID=26370 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:22:55] 2025-10-13 00:21:48,411 | INFO     | monitor loop #337: job 0:6840428936 is in state 'finished'
[2025-10-12 20:22:55] 2025-10-13 00:21:48,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:22:55] 2025-10-13 00:21:49,178 | INFO     | time since job start (4508s) is within the limit (172800.0s)
[2025-10-12 20:22:55] 2025-10-13 00:21:49,527 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:22:55] 2025-10-13 00:21:50,914 | INFO     | monitor loop #338: job 0:6840428936 is in state 'finished'
[2025-10-12 20:22:55] 2025-10-13 00:21:50,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:22:55] 2025-10-13 00:21:51,184 | INFO     | time since job start (4510s) is within the limit (172800.0s)
[2025-10-12 20:22:55] 2025-10-13 00:21:52,498 | INFO     | job 6840428936 has state=finished
[2025-10-12 20:22:55] 2025-10-13 00:21:52,498 | INFO     | preparing for final server update for job 6840428936 in state='finished'
[2025-10-12 20:22:55] 2025-10-13 00:21:52,498 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:22:55] 2025-10-13 00:21:52,499 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:22:55] 2025-10-13 00:21:52,499 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:22:55] 2025-10-13 00:21:52,499 | INFO     | job 6840428936 has finished - writing final server update
[2025-10-12 20:22:55] 2025-10-13 00:21:52,499 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:22:55] 2025-10-13 00:21:52,500 | INFO     | executing command: lscpu
[2025-10-12 20:22:55] 2025-10-13 00:21:52,527 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:22:55] 2025-10-13 00:21:53,189 | INFO     | time since job start (4512s) is within the limit (172800.0s)
[2025-10-12 20:22:55] 2025-10-13 00:21:53,418 | INFO     | monitor loop #339: job 0:6840428936 is in state 'finished'
[2025-10-12 20:22:55] 2025-10-13 00:21:53,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:22:55] 2025-10-13 00:21:55,195 | INFO     | time since job start (4514s) is within the limit (172800.0s)
[2025-10-12 20:22:55] 2025-10-13 00:21:55,921 | INFO     | monitor loop #340: job 0:6840428936 is in state 'finished'
[2025-10-12 20:22:55] 2025-10-13 00:21:55,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,201 | INFO     | time since job start (4516s) is within the limit (172800.0s)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,437 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 20:22:55] 2025-10-13 00:21:57,441 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 20:22:55] 2025-10-13 00:21:57,443 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840428936/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,444 | INFO     | extracted standard info from prmon json
[2025-10-12 20:22:55] 2025-10-13 00:21:57,444 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:22:55] 2025-10-13 00:21:57,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:22:55] 2025-10-13 00:21:57,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:22:55] 2025-10-13 00:21:57,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:22:55] 2025-10-13 00:21:57,446 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:22:55] 2025-10-13 00:21:57,446 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | sum of deviations: -4590473138.000001
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | mean x: 1760312749.0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | mean y: 2726546.7014925373
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | -- intersect: 86667221368.73788
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | intersect: 86667221368.73788
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | chi2: 0.05405279795269051
[2025-10-12 20:22:55] 2025-10-13 00:21:57,447 | INFO     | -- intersect: 86667221368.73788
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | current memory leak: -49.23 B/s (using 67 data points, chi2=0.05)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | ..............................
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | . Timing measurements:
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | . get job = 0 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | . initial setup = 2 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | . payload setup = 7 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,448 | INFO     | . stage-in = 0 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,449 | INFO     | . payload execution = 4476 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,449 | INFO     | . stage-out = 0 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,449 | INFO     | . log creation = 0 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,449 | INFO     | ..............................
[2025-10-12 20:22:55] 2025-10-13 00:21:57,530 | INFO     | 
[2025-10-12 20:22:55] 2025-10-13 00:21:57,530 | INFO     | job summary report
[2025-10-12 20:22:55] 2025-10-13 00:21:57,538 | INFO     | --------------------------------------------------
[2025-10-12 20:22:55] 2025-10-13 00:21:57,538 | INFO     | PanDA job id: 6840428936
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | task id: 46676269
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | errors: (none)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | pilot state: finished 
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | transexitcode: 0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | exeerrorcode: 0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,539 | INFO     | exeerrordiag: 
[2025-10-12 20:22:55] 2025-10-13 00:21:57,540 | INFO     | exitcode: 0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,540 | INFO     | exitmsg: OK
[2025-10-12 20:22:55] 2025-10-13 00:21:57,540 | INFO     | cpuconsumptiontime: 48422 s
[2025-10-12 20:22:55] 2025-10-13 00:21:57,540 | INFO     | nevents: 400
[2025-10-12 20:22:55] 2025-10-13 00:21:57,540 | INFO     | neventsw: 0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,540 | INFO     | pid: 388
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | pgrp: 388
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | corecount: 12
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | event service: False
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4487: 2375279, 4488: 2375278, 4490: 2384460, 4492: 2384516, 4500: 2384710}
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | --------------------------------------------------
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | 
[2025-10-12 20:22:55] 2025-10-13 00:21:57,541 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:22:55] 2025-10-13 00:21:57,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:22:55] 2025-10-13 00:21:57,587 | INFO     | job 6840428936 has completed (purged errors)
[2025-10-12 20:22:55] 2025-10-13 00:21:57,587 | INFO     | overall cleanup function is called
[2025-10-12 20:22:55] 2025-10-13 00:21:58,594 | INFO     | --- collectZombieJob: --- 10, [388]
[2025-10-12 20:22:55] 2025-10-13 00:21:58,594 | INFO     | zombie collector waiting for pid 388
[2025-10-12 20:22:55] 2025-10-13 00:21:58,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:22:55] 2025-10-13 00:21:58,595 | INFO     | collected zombie processes
[2025-10-12 20:22:55] 2025-10-13 00:21:58,595 | INFO     | will attempt to kill all subprocesses of pid=388
[2025-10-12 20:22:55] 2025-10-13 00:21:58,687 | INFO     | process IDs to be killed: [388] (in reverse order)
[2025-10-12 20:22:55] 2025-10-13 00:21:58,738 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:22:55] 2025-10-13 00:21:58,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:22:55] 2025-10-13 00:21:58,742 | INFO     | did not find any defunct processes belonging to 388
[2025-10-12 20:22:55] 2025-10-13 00:21:58,744 | INFO     | did not find any defunct processes belonging to 388
[2025-10-12 20:22:55] 2025-10-13 00:21:58,745 | INFO     | ready for new job
[2025-10-12 20:22:55] 2025-10-13 00:21:58,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:22:55] 2025-10-13 00:21:58,746 | INFO     | ***************************************
[2025-10-12 20:22:55] 2025-10-13 00:21:58,746 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:22:55] 2025-10-13 00:21:58,746 | INFO     | ***************************************
[2025-10-12 20:22:55] 2025-10-13 00:21:58,746 | INFO     | 
[2025-10-12 20:22:55] 2025-10-13 00:21:58,747 | INFO     | architecture information:
[2025-10-12 20:22:55] 2025-10-13 00:21:58,748 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:22:55] 2025-10-13 00:21:58,763 | INFO     | cat /etc/os-release:
[2025-10-12 20:22:55] NAME="CentOS Linux"
[2025-10-12 20:22:55] VERSION="7 (Core)"
[2025-10-12 20:22:55] ID="centos"
[2025-10-12 20:22:55] ID_LIKE="rhel fedora"
[2025-10-12 20:22:55] VERSION_ID="7"
[2025-10-12 20:22:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:22:55] ANSI_COLOR="0;31"
[2025-10-12 20:22:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:22:55] HOME_URL="https://www.centos.org/"
[2025-10-12 20:22:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:22:55] 
[2025-10-12 20:22:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:22:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:22:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:22:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:22:55] 
[2025-10-12 20:22:55] 2025-10-13 00:21:58,764 | INFO     | ***************************************
[2025-10-12 20:22:55] 2025-10-13 00:21:59,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:22:55] 2025-10-13 00:21:59,284 | INFO     | sufficient remaining disk space (29491200000 B)
[2025-10-12 20:22:55] 2025-10-13 00:21:59,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:22:55] 2025-10-13 00:21:59,285 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:22:55] 2025-10-13 00:21:59,285 | INFO     | update_server=False
[2025-10-12 20:22:55] 2025-10-13 00:21:59,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:22:55] 2025-10-13 00:21:59,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:22:55] 2025-10-13 00:21:59,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:22:55] 2025-10-13 00:21:59,329 | INFO     | all payload control threads have been joined
[2025-10-12 20:22:55] 2025-10-13 00:21:59,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:22:55] 2025-10-13 00:21:59,425 | INFO     | aborting loop
[2025-10-12 20:22:55] 2025-10-13 00:21:59,768 | INFO     | all job control threads have been joined
[2025-10-12 20:22:55] 2025-10-13 00:21:59,773 | INFO     | all data control threads have been joined
[2025-10-12 20:22:55] 2025-10-13 00:22:00,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:22:55] 2025-10-13 00:22:00,291 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,291 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,300 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,335 | INFO     | [payload] control thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,426 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,563 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,761 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,774 | INFO     | [job] control thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:00,778 | INFO     | [data] control thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:01,142 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:01,242 | INFO     | [job] validate thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:01,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:01,291 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:01,328 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:01,631 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:04,121 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:22:55] 2025-10-13 00:22:30,401 | INFO     | PID=26370 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:22:55] 2025-10-13 00:22:30,402 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:22:55] 2025-10-13 00:22:30,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:22:55] 2025-10-13 00:22:30,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:22:55] 2025-10-13 00:22:48,442 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:22:55] 2025-10-13 00:22:49,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369465272128)>', '<ExcThread(monitor, started 140369035511552)>']
[2025-10-12 20:22:55] 2025-10-13 00:22:50,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:22:55] 2025-10-13 00:22:50,501 | INFO     | [monitor] control thread has ended
[2025-10-12 20:22:55] 2025-10-13 00:22:54,698 | INFO     | all workflow threads have been joined
[2025-10-12 20:22:55] 2025-10-13 00:22:54,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:22:55] 2025-10-13 00:22:54,699 | INFO     | traces error code: 0
[2025-10-12 20:22:55] 2025-10-13 00:22:54,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:22:55] 2025-10-13 00:22:54,786 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:22:55] 2025-10-13 00:22:54,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:22:55] 2025-10-13 00:22:54,793 [wrapper] pilotpid: 26370
[2025-10-12 20:22:55] 2025-10-13 00:22:54,797 [wrapper] Pilot exit status: 0
[2025-10-12 20:22:55] 2025-10-13 00:22:54,812 [wrapper] pandaids: 6840428936
[2025-10-12 20:22:55] 2025-10-13 00:22:54,860 [wrapper] cleanup supervisor_pilot 25494 26371
[2025-10-12 20:22:55] 2025-10-13 00:22:54,864 [wrapper] Test setup, not cleaning
[2025-10-12 20:22:55] 2025-10-13 00:22:54,868 [wrapper] apfmon messages muted
[2025-10-12 20:22:55] 2025-10-13 00:22:54,872 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:22:55] 2025-10-13 00:22:54,876 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:22:55]  *** Error codes and diagnostics ***
[2025-10-12 20:22:55]     "exeErrorCode": 0,
[2025-10-12 20:22:55]     "exeErrorDiag": "",
[2025-10-12 20:22:55]     "pilotErrorCode": 0,
[2025-10-12 20:22:55]     "pilotErrorDiag": "",
[2025-10-12 20:22:55]  *** Listing of results directory ***
[2025-10-12 20:22:55] total 419444
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:13 queuedata.json
[2025-10-12 20:22:55] -rwx------ 1 boincer umatlas     36292 Oct 12 13:13 runpilot2-wrapper.sh
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:22:55] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:06 run_atlas
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:06 job.xml
[2025-10-12 20:22:55] -rw-r--r-- 2 boincer umatlas 222140177 Oct 12 19:06 EVNT.46676267._004805.pool.root.1
[2025-10-12 20:22:55] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:06 start_atlas.sh
[2025-10-12 20:22:55] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:06 shared
[2025-10-12 20:22:55] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 19:06 input.tar.gz
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:06 boinc_lockfile
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:06 pandaJob.out
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas    975603 Oct 12 19:06 agis_schedconf.cvmfs.json
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas   1560580 Oct 12 19:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:22:55] drwx------ 5 boincer umatlas      4096 Oct 12 19:06 pilot3
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 20:19 init_data.xml
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas 201359001 Oct 12 20:21 HITS.46676269._084520.pool.root.1
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas       529 Oct 12 20:21 boinc_task_state.xml
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas        95 Oct 12 20:21 pilot_heartbeat.json
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas      1051 Oct 12 20:21 memory_monitor_summary.json
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas    395399 Oct 12 20:21 log.46676269._084520.job.log.tgz.1
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas      7858 Oct 12 20:21 heartbeat.json
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:22 boinc_mmap_file
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas        27 Oct 12 20:22 wrapper_checkpoint.txt
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas      4746 Oct 12 20:22 pilotlog.txt
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas    655489 Oct 12 20:22 log.46676269._084520.job.log.1
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas       357 Oct 12 20:22 output.list
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:22 runtime_log
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas   1075200 Oct 12 20:22 result.tar.gz
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 20:22 runtime_log.err
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas       659 Oct 12 20:22 5LFNDmQoES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrUUMDmxkwxTm.diag
[2025-10-12 20:22:55] -rw-r--r-- 1 boincer umatlas     22220 Oct 12 20:22 stderr.txt
[2025-10-12 20:22:55] HITS file was successfully produced:
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas 201359001 Oct 12 20:21 shared/HITS.pool.root.1
[2025-10-12 20:22:55]  *** Contents of shared directory: ***
[2025-10-12 20:22:55] total 415208
[2025-10-12 20:22:55] -rw-r--r-- 2 boincer umatlas 222140177 Oct 12 19:06 ATLAS.root_0
[2025-10-12 20:22:55] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:06 start_atlas.sh
[2025-10-12 20:22:55] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 19:06 input.tar.gz
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas 201359001 Oct 12 20:21 HITS.pool.root.1
[2025-10-12 20:22:55] -rw------- 1 boincer umatlas   1075200 Oct 12 20:22 result.tar.gz
20:22:56 (22690): run_atlas exited; CPU time 48388.801982
20:22:56 (22690): called boinc_finish(0)

</stderr_txt>
]]>

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