Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:38 (14109): wrapper (7.7.26015): starting
09:43:38 (14109): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:43:38] Arguments: --nthreads 8
[2025-10-13 09:43:38] Threads: 8
[2025-10-13 09:43:38] Checking for CVMFS
[2025-10-13 09:43:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:43:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:43:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:43:41] 2.11.2.0 16161 221551 137772 151653 2 60 13254510 25165824 4632 130560 0 141570789 99.897 65348988 3290 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 09:43:41] CVMFS is ok
[2025-10-13 09:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:43:41] Checking for apptainer binary...
[2025-10-13 09:43:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:43:41] Running /usr/bin/apptainer --version
[2025-10-13 09:43:42] apptainer version 1.3.2-1.el7
[2025-10-13 09:43:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:43:55] cg-vwn420.simple-grid.lan
[2025-10-13 09:43:55] apptainer works
[2025-10-13 09:43:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:43:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:43:56] Starting ATLAS job with PandaID=6840531232
[2025-10-13 09:43:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:55:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:55:11] 2025-10-13 11:54:07,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:55:11] 2025-10-13 11:54:07,241 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:55:11] 2025-10-13 11:54:07,242 | INFO     | sum of square deviations: 3922276332.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,244 | INFO     | sum of deviations: 84087073393.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,244 | INFO     | mean x: 1760349228.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,244 | INFO     | mean y: 2428837.3519313303
[2025-10-13 13:55:11] 2025-10-13 11:54:07,244 | INFO     | -- intersect: -37736527371.44456
[2025-10-13 13:55:11] 2025-10-13 11:54:07,244 | INFO     | intersect: -37736527371.44456
[2025-10-13 13:55:11] 2025-10-13 11:54:07,245 | INFO     | chi2: 5.826487334153138
[2025-10-13 13:55:11] 2025-10-13 11:54:07,245 | INFO     | sum of square deviations: 3675146117.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,247 | INFO     | sum of deviations: 97372169117.49998
[2025-10-13 13:55:11] 2025-10-13 11:54:07,247 | INFO     | mean x: 1760349075.5
[2025-10-13 13:55:11] 2025-10-13 11:54:07,247 | INFO     | mean y: 2436870.1271929825
[2025-10-13 13:55:11] 2025-10-13 11:54:07,248 | INFO     | -- intersect: -46637615641.67359
[2025-10-13 13:55:11] 2025-10-13 11:54:07,248 | INFO     | intersect: -46637615641.67359
[2025-10-13 13:55:11] 2025-10-13 11:54:07,248 | INFO     | chi2: 5.100541726112451
[2025-10-13 13:55:11] 2025-10-13 11:54:07,248 | INFO     | current chi2=5.100541726112451 (change=12.459404207152565 %)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,248 | INFO     | right removable region: 227
[2025-10-13 13:55:11] 2025-10-13 11:54:07,249 | INFO     | sum of square deviations: 3675146117.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,251 | INFO     | sum of deviations: 7454321786.5
[2025-10-13 13:55:11] 2025-10-13 11:54:07,251 | INFO     | mean x: 1760349380.5
[2025-10-13 13:55:11] 2025-10-13 11:54:07,251 | INFO     | mean y: 2476075.3114035088
[2025-10-13 13:55:11] 2025-10-13 11:54:07,251 | INFO     | -- intersect: -3568051550.301619
[2025-10-13 13:55:11] 2025-10-13 11:54:07,251 | INFO     | intersect: -3568051550.301619
[2025-10-13 13:55:11] 2025-10-13 11:54:07,251 | INFO     | chi2: 1.5327921454733247
[2025-10-13 13:55:11] 2025-10-13 11:54:07,252 | INFO     | current chi2=1.5327921454733247 (change=73.69268896392252 %)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,252 | INFO     | sum of square deviations: 3438620752.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,254 | INFO     | sum of deviations: -17474816095.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,254 | INFO     | mean x: 1760349533.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,254 | INFO     | mean y: 2491999.8295964124
[2025-10-13 13:55:11] 2025-10-13 11:54:07,254 | INFO     | -- intersect: 8948458005.00833
[2025-10-13 13:55:11] 2025-10-13 11:54:07,254 | INFO     | intersect: 8948458005.00833
[2025-10-13 13:55:11] 2025-10-13 11:54:07,255 | INFO     | chi2: 0.8581868097209477
[2025-10-13 13:55:11] 2025-10-13 11:54:07,255 | INFO     | current chi2=0.8581868097209477 (change=44.01153396725291 %)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,255 | INFO     | sum of square deviations: 3212467674.5
[2025-10-13 13:55:11] 2025-10-13 11:54:07,257 | INFO     | sum of deviations: -12263121152.999998
[2025-10-13 13:55:11] 2025-10-13 11:54:07,257 | INFO     | mean x: 1760349685.5
[2025-10-13 13:55:11] 2025-10-13 11:54:07,257 | INFO     | mean y: 2488458.862385321
[2025-10-13 13:55:11] 2025-10-13 11:54:07,258 | INFO     | -- intersect: 6722363536.918037
[2025-10-13 13:55:11] 2025-10-13 11:54:07,258 | INFO     | intersect: 6722363536.918037
[2025-10-13 13:55:11] 2025-10-13 11:54:07,258 | INFO     | chi2: 0.8321891241215634
[2025-10-13 13:55:11] 2025-10-13 11:54:07,258 | INFO     | current chi2=0.8321891241215634 (change=3.0293737103507623 %)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,258 | INFO     | left removable region: 30
[2025-10-13 13:55:11] 2025-10-13 11:54:07,259 | INFO     | sum of square deviations: 2370641658.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,260 | INFO     | sum of deviations: 5753276610.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,260 | INFO     | mean x: 1760349960.0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,261 | INFO     | mean y: 2495858.279187817
[2025-10-13 13:55:11] 2025-10-13 11:54:07,261 | INFO     | -- intersect: -4269672487.41114
[2025-10-13 13:55:11] 2025-10-13 11:54:07,261 | INFO     | intersect: -4269672487.41114
[2025-10-13 13:55:11] 2025-10-13 11:54:07,261 | INFO     | chi2: 0.00047700121394013303
[2025-10-13 13:55:11] 2025-10-13 11:54:07,261 | INFO     | -- intersect: -4269672487.41114
[2025-10-13 13:55:11] 2025-10-13 11:54:07,261 | INFO     | current memory leak: 2.43 B/s (using 197 data points, chi2=0.00)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,262 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,262 | INFO     | ..............................
[2025-10-13 13:55:11] 2025-10-13 11:54:07,262 | INFO     | . Timing measurements:
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . get job = 0 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . initial setup = 5 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . payload setup = 147 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . stage-in = 0 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . payload execution = 14346 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . stage-out = 4 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | . log creation = 1 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,263 | INFO     | ..............................
[2025-10-13 13:55:11] 2025-10-13 11:54:07,360 | INFO     | time since job start (14791s) is within the limit (172800.0s)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | 
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | job summary report
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | --------------------------------------------------
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | PanDA job id: 6840531232
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | task id: 46676269
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | errors: (none)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | pilot state: finished 
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | transexitcode: 0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | exeerrorcode: 0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | exeerrordiag: 
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | exitcode: 0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | exitmsg: OK
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | cpuconsumptiontime: 53844 s
[2025-10-13 13:55:11] 2025-10-13 11:54:07,470 | INFO     | nevents: 400
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | neventsw: 0
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | pid: 24506
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | pgrp: 24506
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | corecount: 8
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | event service: False
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | sizes: {0: 2348579, 1: 2348834, 12: 2348834, 23: 2348862, 34: 2348890, 44: 2348918, 55: 2349074, 66: 2349102, 77: 2349130, 87: 2349186, 90: 2349476, 98: 2349784, 1
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | --------------------------------------------------
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | 
[2025-10-13 13:55:11] 2025-10-13 11:54:07,471 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 13:55:11] 2025-10-13 11:54:07,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:55:11] 2025-10-13 11:54:07,793 | INFO     | job 6840531232 has completed (purged errors)
[2025-10-13 13:55:11] 2025-10-13 11:54:07,794 | INFO     | overall cleanup function is called
[2025-10-13 13:55:11] 2025-10-13 11:54:08,802 | INFO     | --- collectZombieJob: --- 10, [24506]
[2025-10-13 13:55:11] 2025-10-13 11:54:08,802 | INFO     | zombie collector waiting for pid 24506
[2025-10-13 13:55:11] 2025-10-13 11:54:08,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:55:11] 2025-10-13 11:54:08,802 | INFO     | collected zombie processes
[2025-10-13 13:55:11] 2025-10-13 11:54:08,802 | INFO     | will attempt to kill all subprocesses of pid=24506
[2025-10-13 13:55:11] 2025-10-13 11:54:08,941 | INFO     | process IDs to be killed: [24506] (in reverse order)
[2025-10-13 13:55:11] 2025-10-13 11:54:09,786 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:55:11] 2025-10-13 11:54:09,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:55:11] 2025-10-13 11:54:09,790 | INFO     | did not find any defunct processes belonging to 24506
[2025-10-13 13:55:11] 2025-10-13 11:54:09,793 | INFO     | did not find any defunct processes belonging to 24506
[2025-10-13 13:55:11] 2025-10-13 11:54:09,794 | INFO     | ready for new job
[2025-10-13 13:55:11] 2025-10-13 11:54:09,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:55:11] 2025-10-13 11:54:09,796 | INFO     | ***************************************
[2025-10-13 13:55:11] 2025-10-13 11:54:09,796 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:55:11] 2025-10-13 11:54:09,796 | INFO     | ***************************************
[2025-10-13 13:55:11] 2025-10-13 11:54:09,797 | INFO     | 
[2025-10-13 13:55:11] 2025-10-13 11:54:09,797 | INFO     | pilot is running in a VM
[2025-10-13 13:55:11] 2025-10-13 11:54:09,797 | INFO     | architecture information:
[2025-10-13 13:55:11] 2025-10-13 11:54:09,800 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:55:11] 2025-10-13 11:54:09,874 | INFO     | cat /etc/os-release:
[2025-10-13 13:55:11] NAME="CentOS Linux"
[2025-10-13 13:55:11] VERSION="7 (Core)"
[2025-10-13 13:55:11] ID="centos"
[2025-10-13 13:55:11] ID_LIKE="rhel fedora"
[2025-10-13 13:55:11] VERSION_ID="7"
[2025-10-13 13:55:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:55:11] ANSI_COLOR="0;31"
[2025-10-13 13:55:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:55:11] HOME_URL="https://www.centos.org/"
[2025-10-13 13:55:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:55:11] 
[2025-10-13 13:55:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:55:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:55:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:55:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:55:11] 
[2025-10-13 13:55:11] 2025-10-13 11:54:09,874 | INFO     | ***************************************
[2025-10-13 13:55:11] 2025-10-13 11:54:10,378 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 13:55:11] 2025-10-13 11:54:10,466 | INFO     | sufficient remaining disk space (496128491520 B)
[2025-10-13 13:55:11] 2025-10-13 11:54:10,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:55:11] 2025-10-13 11:54:10,467 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:55:11] 2025-10-13 11:54:10,467 | INFO     | update_server=False
[2025-10-13 13:55:11] 2025-10-13 11:54:10,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:55:11] 2025-10-13 11:54:10,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:55:11] 2025-10-13 11:54:10,468 | INFO     | aborting loop
[2025-10-13 13:55:11] 2025-10-13 11:54:10,515 | INFO     | all job control threads have been joined
[2025-10-13 13:55:11] 2025-10-13 11:54:10,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:55:11] 2025-10-13 11:54:11,126 | INFO     | all payload control threads have been joined
[2025-10-13 13:55:11] 2025-10-13 11:54:11,449 | INFO     | all data control threads have been joined
[2025-10-13 13:55:11] 2025-10-13 11:54:11,473 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:11,474 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:11,521 | INFO     | [job] control thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:11,647 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:11,722 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:11,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:55:11] 2025-10-13 11:54:12,093 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,132 | INFO     | [payload] control thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,227 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:55:11] 2025-10-13 11:54:12,455 | INFO     | [data] control thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,468 | INFO     | [job] validate thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,678 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,828 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:12,950 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:13,444 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:15,934 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:55:11] 2025-10-13 11:54:40,539 | INFO     | PID=17940 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 13:55:11] 2025-10-13 11:54:40,539 | INFO     | .. there are 9 such processes running
[2025-10-13 13:55:11] 2025-10-13 11:54:40,540 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:55:11] 2025-10-13 11:54:40,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:55:11] 2025-10-13 11:54:40,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:55:11] 2025-10-13 11:55:00,706 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:55:11] 2025-10-13 11:55:02,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145836246848)>', '<ExcThread(monitor, started 140145177126656)>']
[2025-10-13 13:55:11] 2025-10-13 11:55:02,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:55:11] 2025-10-13 11:55:02,673 | INFO     | [monitor] control thread has ended
[2025-10-13 13:55:11] 2025-10-13 11:55:07,173 | INFO     | all workflow threads have been joined
[2025-10-13 13:55:11] 2025-10-13 11:55:07,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:55:11] 2025-10-13 11:55:07,173 | INFO     | traces error code: 0
[2025-10-13 13:55:11] 2025-10-13 11:55:07,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:55:11] 2025-10-13 11:55:07,503 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:55:11] 2025-10-13 11:55:07,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:55:11] 2025-10-13 11:55:07,588 [wrapper] pilotpid: 17940
[2025-10-13 13:55:11] 2025-10-13 11:55:07,632 [wrapper] Pilot exit status: 0
[2025-10-13 13:55:11] 2025-10-13 11:55:07,936 [wrapper] pandaids: 6840531232
[2025-10-13 13:55:11] 2025-10-13 11:55:08,768 [wrapper] cleanup supervisor_pilot 18819 17941
[2025-10-13 13:55:11] 2025-10-13 11:55:08,867 [wrapper] Test setup, not cleaning
[2025-10-13 13:55:11] 2025-10-13 11:55:08,990 [wrapper] apfmon messages muted
[2025-10-13 13:55:11] 2025-10-13 11:55:09,116 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:55:11] 2025-10-13 11:55:09,174 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:55:11]  *** Error codes and diagnostics ***
[2025-10-13 13:55:11]     "exeErrorCode": 0,
[2025-10-13 13:55:11]     "exeErrorDiag": "",
[2025-10-13 13:55:11]     "pilotErrorCode": 0,
[2025-10-13 13:55:11]     "pilotErrorDiag": "",
[2025-10-13 13:55:11]  *** Listing of results directory ***
[2025-10-13 13:55:11] total 412852
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc    557409 Oct 12 19:57 pilot3.tar.gz
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc      5112 Oct 12 20:04 queuedata.json
[2025-10-13 13:55:11] -rwx------. 1 boinc boinc     36292 Oct 12 20:06 runpilot2-wrapper.sh
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc       100 Oct 13 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:55:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 09:43 run_atlas
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc       105 Oct 13 09:43 job.xml
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc      6390 Oct 13 09:43 init_data.xml
[2025-10-13 13:55:11] -rw-r--r--. 2 boinc boinc 222599735 Oct 13 09:43 EVNT.46676267._004387.pool.root.1
[2025-10-13 13:55:11] -rw-r--r--. 2 boinc boinc     15120 Oct 13 09:43 start_atlas.sh
[2025-10-13 13:55:11] drwxrwx--x. 2 boinc boinc        68 Oct 13 09:43 shared
[2025-10-13 13:55:11] -rw-r--r--. 2 boinc boinc    569681 Oct 13 09:43 input.tar.gz
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc         0 Oct 13 09:43 boinc_lockfile
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc      2549 Oct 13 09:43 pandaJob.out
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc    972849 Oct 13 09:47 agis_schedconf.cvmfs.json
[2025-10-13 13:55:11] drwx------. 5 boinc boinc      4096 Oct 13 09:47 pilot3
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc 191403529 Oct 13 13:50 HITS.46676269._085674.pool.root.1
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc       531 Oct 13 13:51 boinc_task_state.xml
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc      1013 Oct 13 13:52 memory_monitor_summary.json
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc   1560580 Oct 13 13:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc    450446 Oct 13 13:52 log.46676269._085674.job.log.tgz.1
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc      7779 Oct 13 13:54 heartbeat.json
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc        95 Oct 13 13:54 pilot_heartbeat.json
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc      4884 Oct 13 13:55 pilotlog.txt
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc   1985153 Oct 13 13:55 log.46676269._085674.job.log.1
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc        28 Oct 13 13:55 wrapper_checkpoint.txt
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc       357 Oct 13 13:55 output.list
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc       620 Oct 13 13:55 runtime_log
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc   2457600 Oct 13 13:55 result.tar.gz
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc       656 Oct 13 13:55 sKGMDmRdFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsdUMDmtS5Yyn.diag
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc      8703 Oct 13 13:55 runtime_log.err
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc      8192 Oct 13 13:55 boinc_mmap_file
[2025-10-13 13:55:11] -rw-r--r--. 1 boinc boinc     20617 Oct 13 13:55 stderr.txt
[2025-10-13 13:55:11] HITS file was successfully produced:
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc 191403529 Oct 13 13:50 shared/HITS.pool.root.1
[2025-10-13 13:55:11]  *** Contents of shared directory: ***
[2025-10-13 13:55:11] total 407280
[2025-10-13 13:55:11] -rw-r--r--. 2 boinc boinc 222599735 Oct 13 09:43 ATLAS.root_0
[2025-10-13 13:55:11] -rw-r--r--. 2 boinc boinc     15120 Oct 13 09:43 start_atlas.sh
[2025-10-13 13:55:11] -rw-r--r--. 2 boinc boinc    569681 Oct 13 09:43 input.tar.gz
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc 191403529 Oct 13 13:50 HITS.pool.root.1
[2025-10-13 13:55:11] -rw-------. 1 boinc boinc   2457600 Oct 13 13:55 result.tar.gz
13:55:12 (14109): run_atlas exited; CPU time 54047.170211
13:55:12 (14109): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN