Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:06:51 (15447): wrapper (7.7.26015): starting
19:06:51 (15447): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:06:51] Arguments: --nthreads 8
[2025-10-12 19:06:51] Threads: 8
[2025-10-12 19:06:51] Checking for CVMFS
[2025-10-12 19:06:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:06:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:06:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:06:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:06:52] 2.11.2.0 25047 53388 110976 151640 0 188 15460821 20275201 917 130560 0 64061039 99.979 2413652 24048 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:06:52] CVMFS is ok
[2025-10-12 19:06:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:06:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:06:52] Further information can be found at the LHC@home message board.
[2025-10-12 19:06:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:06:52] Checking for apptainer binary...
[2025-10-12 19:06:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:06:52] Running /usr/bin/apptainer --version
[2025-10-12 19:06:52] apptainer version 1.3.2-1.el7
[2025-10-12 19:06:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:06:53] c-205-37.aglt2.org
[2025-10-12 19:06:53] apptainer works
[2025-10-12 19:06:53] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:06:53] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:06:53] Starting ATLAS job with PandaID=6840430172
[2025-10-12 19:06:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:12:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:12:17]  workdir=None
[2025-10-12 20:12:17] ]
[2025-10-12 20:12:17] 2025-10-13 00:11:24,995 | INFO     | transferring file log.46676269._085128.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840430172/log.46676269._085128.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 20:12:17] 2025-10-13 00:11:24,995 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840430172/log.46676269._085128.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._085128.job
[2025-10-12 20:12:17] 2025-10-13 00:11:25,014 | INFO     | adding to output.list: log.46676269._085128.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/26/log.46676269._085128.job.log.tg
[2025-10-12 20:12:17] 2025-10-13 00:11:25,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:12:17] 2025-10-13 00:11:25,016 | INFO     | summary of transferred files:
[2025-10-12 20:12:17] 2025-10-13 00:11:25,016 | INFO     |  -- lfn=log.46676269._085128.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:12:17] 2025-10-13 00:11:25,016 | INFO     | stage-out finished correctly
[2025-10-12 20:12:17] 2025-10-13 00:11:25,210 | WARNING  | process 25577 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 20:12:17] 2025-10-13 00:11:25,210 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840430172/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:12:17] 2025-10-13 00:11:25,291 | INFO     | number of running child processes to parent process 25577: 1
[2025-10-12 20:12:17] 2025-10-13 00:11:25,291 | INFO     | maximum number of monitored processes: 6
[2025-10-12 20:12:17] 2025-10-13 00:11:25,765 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:12:17] 2025-10-13 00:11:26,792 | INFO     | time since job start (3861s) is within the limit (172800.0s)
[2025-10-12 20:12:17] 2025-10-13 00:11:27,794 | INFO     | monitor loop #287: job 0:6840430172 is in state 'finished'
[2025-10-12 20:12:17] 2025-10-13 00:11:27,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:12:17] 2025-10-13 00:11:28,789 | INFO     | job 6840430172 has state=finished
[2025-10-12 20:12:17] 2025-10-13 00:11:28,789 | INFO     | preparing for final server update for job 6840430172 in state='finished'
[2025-10-12 20:12:17] 2025-10-13 00:11:28,790 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:12:17] 2025-10-13 00:11:28,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:12:17] 2025-10-13 00:11:28,790 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:12:17] 2025-10-13 00:11:28,790 | INFO     | job 6840430172 has finished - writing final server update
[2025-10-12 20:12:17] 2025-10-13 00:11:28,791 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:12:17] 2025-10-13 00:11:28,791 | INFO     | executing command: lscpu
[2025-10-12 20:12:17] 2025-10-13 00:11:28,799 | INFO     | time since job start (3863s) is within the limit (172800.0s)
[2025-10-12 20:12:17] 2025-10-13 00:11:28,824 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:12:17] 2025-10-13 00:11:30,299 | INFO     | monitor loop #288: job 0:6840430172 is in state 'finished'
[2025-10-12 20:12:17] 2025-10-13 00:11:30,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:12:17] 2025-10-13 00:11:30,804 | INFO     | time since job start (3865s) is within the limit (172800.0s)
[2025-10-12 20:12:17] 2025-10-13 00:11:32,802 | INFO     | monitor loop #289: job 0:6840430172 is in state 'finished'
[2025-10-12 20:12:17] 2025-10-13 00:11:32,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:12:17] 2025-10-13 00:11:32,809 | INFO     | time since job start (3867s) is within the limit (172800.0s)
[2025-10-12 20:12:17] 2025-10-13 00:11:32,985 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:12:17] 2025-10-13 00:11:32,990 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2073.1013749999997
[2025-10-12 20:12:17] 2025-10-13 00:11:32,993 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840430172/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:12:17] 2025-10-13 00:11:32,994 | INFO     | extracted standard info from prmon json
[2025-10-12 20:12:17] 2025-10-13 00:11:32,994 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:12:17] 2025-10-13 00:11:32,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:12:17] 2025-10-13 00:11:32,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:12:17] 2025-10-13 00:11:32,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:12:17] 2025-10-13 00:11:32,996 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:12:17] 2025-10-13 00:11:32,997 | INFO     | sum of square deviations: 54438230.0
[2025-10-12 20:12:17] 2025-10-13 00:11:32,997 | INFO     | sum of deviations: -1438795989.5
[2025-10-12 20:12:17] 2025-10-13 00:11:32,997 | INFO     | mean x: 1760312433.5
[2025-10-12 20:12:17] 2025-10-13 00:11:32,997 | INFO     | mean y: 2535685.4464285714
[2025-10-12 20:12:17] 2025-10-13 00:11:32,998 | INFO     | -- intersect: 46527385402.02952
[2025-10-12 20:12:17] 2025-10-13 00:11:32,998 | INFO     | intersect: 46527385402.02952
[2025-10-12 20:12:17] 2025-10-13 00:11:32,998 | INFO     | chi2: 0.012389068186570207
[2025-10-12 20:12:17] 2025-10-13 00:11:32,998 | INFO     | -- intersect: 46527385402.02952
[2025-10-12 20:12:17] 2025-10-13 00:11:32,998 | INFO     | current memory leak: -26.43 B/s (using 56 data points, chi2=0.01)
[2025-10-12 20:12:17] 2025-10-13 00:11:32,998 | INFO     | could have reported an average CPU frequency of 2235 MHz (6 samples)
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | ..............................
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . Timing measurements:
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . get job = 0 s
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . initial setup = 2 s
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . payload setup = 5 s
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . stage-in = 0 s
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . payload execution = 3833 s
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . stage-out = 0 s
[2025-10-12 20:12:17] 2025-10-13 00:11:32,999 | INFO     | . log creation = 0 s
[2025-10-12 20:12:17] 2025-10-13 00:11:33,000 | INFO     | ..............................
[2025-10-12 20:12:17] 2025-10-13 00:11:33,076 | INFO     | 
[2025-10-12 20:12:17] 2025-10-13 00:11:33,076 | INFO     | job summary report
[2025-10-12 20:12:17] 2025-10-13 00:11:33,076 | INFO     | --------------------------------------------------
[2025-10-12 20:12:17] 2025-10-13 00:11:33,076 | INFO     | PanDA job id: 6840430172
[2025-10-12 20:12:17] 2025-10-13 00:11:33,076 | INFO     | task id: 46676269
[2025-10-12 20:12:17] 2025-10-13 00:11:33,076 | INFO     | errors: (none)
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | pilot state: finished 
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | transexitcode: 0
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | exeerrorcode: 0
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | exeerrordiag: 
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | exitcode: 0
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | exitmsg: OK
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | cpuconsumptiontime: 28482 s
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | nevents: 400
[2025-10-12 20:12:17] 2025-10-13 00:11:33,077 | INFO     | neventsw: 0
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | pid: 25577
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | pgrp: 25577
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | corecount: 8
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | event service: False
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 3842: 2375097, 3844: 2384095, 3845: 2384279, 3852: 2384473}
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | --------------------------------------------------
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | 
[2025-10-12 20:12:17] 2025-10-13 00:11:33,078 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 20:12:17] 2025-10-13 00:11:33,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | job 6840430172 has completed (purged errors)
[2025-10-12 20:12:17] 2025-10-13 00:11:33,102 | INFO     | overall cleanup function is called
[2025-10-12 20:12:17] 2025-10-13 00:11:34,110 | INFO     | --- collectZombieJob: --- 10, [25577]
[2025-10-12 20:12:17] 2025-10-13 00:11:34,111 | INFO     | zombie collector waiting for pid 25577
[2025-10-12 20:12:17] 2025-10-13 00:11:34,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:12:17] 2025-10-13 00:11:34,111 | INFO     | collected zombie processes
[2025-10-12 20:12:17] 2025-10-13 00:11:34,111 | INFO     | will attempt to kill all subprocesses of pid=25577
[2025-10-12 20:12:17] 2025-10-13 00:11:34,227 | INFO     | process IDs to be killed: [25577] (in reverse order)
[2025-10-12 20:12:17] 2025-10-13 00:11:34,286 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:12:17] 2025-10-13 00:11:34,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:12:17] 2025-10-13 00:11:34,290 | INFO     | did not find any defunct processes belonging to 25577
[2025-10-12 20:12:17] 2025-10-13 00:11:34,294 | INFO     | did not find any defunct processes belonging to 25577
[2025-10-12 20:12:17] 2025-10-13 00:11:34,294 | INFO     | ready for new job
[2025-10-12 20:12:17] 2025-10-13 00:11:34,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:12:17] 2025-10-13 00:11:34,296 | INFO     | ***************************************
[2025-10-12 20:12:17] 2025-10-13 00:11:34,296 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:12:17] 2025-10-13 00:11:34,296 | INFO     | ***************************************
[2025-10-12 20:12:17] 2025-10-13 00:11:34,296 | INFO     | 
[2025-10-12 20:12:17] 2025-10-13 00:11:34,297 | INFO     | architecture information:
[2025-10-12 20:12:17] 2025-10-13 00:11:34,297 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:12:17] 2025-10-13 00:11:34,312 | INFO     | cat /etc/os-release:
[2025-10-12 20:12:17] NAME="CentOS Linux"
[2025-10-12 20:12:17] VERSION="7 (Core)"
[2025-10-12 20:12:17] ID="centos"
[2025-10-12 20:12:17] ID_LIKE="rhel fedora"
[2025-10-12 20:12:17] VERSION_ID="7"
[2025-10-12 20:12:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:12:17] ANSI_COLOR="0;31"
[2025-10-12 20:12:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:12:17] HOME_URL="https://www.centos.org/"
[2025-10-12 20:12:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:12:17] 
[2025-10-12 20:12:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:12:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:12:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:12:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:12:17] 
[2025-10-12 20:12:17] 2025-10-13 00:11:34,312 | INFO     | ***************************************
[2025-10-12 20:12:17] 2025-10-13 00:11:34,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 20:12:17] 2025-10-13 00:11:34,834 | INFO     | sufficient remaining disk space (32923189248 B)
[2025-10-12 20:12:17] 2025-10-13 00:11:34,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:12:17] 2025-10-13 00:11:34,835 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:12:17] 2025-10-13 00:11:34,835 | INFO     | update_server=False
[2025-10-12 20:12:17] 2025-10-13 00:11:34,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:12:17] 2025-10-13 00:11:34,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:12:17] 2025-10-13 00:11:34,848 | INFO     | all payload control threads have been joined
[2025-10-12 20:12:17] 2025-10-13 00:11:35,158 | INFO     | all data control threads have been joined
[2025-10-12 20:12:17] 2025-10-13 00:11:35,305 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:12:17] 2025-10-13 00:11:35,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:12:17] 2025-10-13 00:11:35,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:12:17] 2025-10-13 00:11:35,306 | INFO     | will abort loop
[2025-10-12 20:12:17] 2025-10-13 00:11:35,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:12:17] 2025-10-13 00:11:35,841 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:35,841 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:35,854 | INFO     | [payload] control thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,003 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,003 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,163 | INFO     | [data] control thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,287 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,310 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:12:17] 2025-10-13 00:11:36,457 | INFO     | all job control threads have been joined
[2025-10-12 20:12:17] 2025-10-13 00:11:36,724 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,896 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:36,945 | INFO     | [job] validate thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:37,297 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:37,463 | INFO     | [job] control thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:37,619 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:40,361 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:11:45,286 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:12:17] 2025-10-13 00:11:46,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:12:17] 2025-10-13 00:12:06,040 | INFO     | PID=19167 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:12:17] 2025-10-13 00:12:06,040 | INFO     | .. there are 2 such processes running
[2025-10-12 20:12:17] 2025-10-13 00:12:06,041 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:12:17] 2025-10-13 00:12:06,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:12:17] 2025-10-13 00:12:06,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:12:17] 2025-10-13 00:12:10,920 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:12:17] 2025-10-13 00:12:12,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107368896320)>', '<ExcThread(monitor, started 140107149948672)>']
[2025-10-12 20:12:17] 2025-10-13 00:12:13,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:12:17] 2025-10-13 00:12:13,077 | INFO     | [monitor] control thread has ended
[2025-10-12 20:12:17] 2025-10-13 00:12:17,638 | INFO     | all workflow threads have been joined
[2025-10-12 20:12:17] 2025-10-13 00:12:17,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:12:17] 2025-10-13 00:12:17,639 | INFO     | traces error code: 0
[2025-10-12 20:12:17] 2025-10-13 00:12:17,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:12:17] 2025-10-13 00:12:17,759 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:12:17] 2025-10-13 00:12:17,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:12:17] 2025-10-13 00:12:17,765 [wrapper] pilotpid: 19167
[2025-10-12 20:12:17] 2025-10-13 00:12:17,768 [wrapper] Pilot exit status: 0
[2025-10-12 20:12:17] 2025-10-13 00:12:17,779 [wrapper] pandaids: 6840430172
[2025-10-12 20:12:17] 2025-10-13 00:12:17,824 [wrapper] cleanup supervisor_pilot 11647 19168
[2025-10-12 20:12:17] 2025-10-13 00:12:17,827 [wrapper] Test setup, not cleaning
[2025-10-12 20:12:17] 2025-10-13 00:12:17,831 [wrapper] apfmon messages muted
[2025-10-12 20:12:17] 2025-10-13 00:12:17,835 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:12:17] 2025-10-13 00:12:17,838 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:12:17]  *** Error codes and diagnostics ***
[2025-10-12 20:12:17]     "exeErrorCode": 0,
[2025-10-12 20:12:17]     "exeErrorDiag": "",
[2025-10-12 20:12:17]     "pilotErrorCode": 0,
[2025-10-12 20:12:17]     "pilotErrorDiag": "",
[2025-10-12 20:12:17]  *** Listing of results directory ***
[2025-10-12 20:12:17] total 403148
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:41 queuedata.json
[2025-10-12 20:12:17] -rwx------ 1 boincer umatlas     36292 Oct 12 13:43 runpilot2-wrapper.sh
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:12:17] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:06 run_atlas
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:06 job.xml
[2025-10-12 20:12:17] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:06 shared
[2025-10-12 20:12:17] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 19:06 input.tar.gz
[2025-10-12 20:12:17] -rw-r--r-- 2 boincer umatlas 218491874 Oct 12 19:06 EVNT.46676267._002684.pool.root.1
[2025-10-12 20:12:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:06 start_atlas.sh
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:06 boinc_lockfile
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:06 pandaJob.out
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas    975603 Oct 12 19:07 agis_schedconf.cvmfs.json
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas   1560580 Oct 12 19:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:12:17] drwx------ 5 boincer umatlas      4096 Oct 12 19:07 pilot3
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas      6135 Oct 12 20:10 init_data.xml
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas 188652737 Oct 12 20:10 HITS.46676269._085128.pool.root.1
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas       529 Oct 12 20:11 boinc_task_state.xml
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas      1044 Oct 12 20:11 memory_monitor_summary.json
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas    306654 Oct 12 20:11 log.46676269._085128.job.log.tgz.1
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas      7834 Oct 12 20:11 heartbeat.json
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:11 boinc_mmap_file
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas        27 Oct 12 20:11 wrapper_checkpoint.txt
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas        95 Oct 12 20:12 pilot_heartbeat.json
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas      5079 Oct 12 20:12 pilotlog.txt
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas    581523 Oct 12 20:12 log.46676269._085128.job.log.1
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas       357 Oct 12 20:12 output.list
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:12 runtime_log
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas    911360 Oct 12 20:12 result.tar.gz
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas       657 Oct 12 20:12 Z6uNDmBHFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwukNDmQntknm.diag
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 20:12 runtime_log.err
[2025-10-12 20:12:17] -rw-r--r-- 1 boincer umatlas     22231 Oct 12 20:12 stderr.txt
[2025-10-12 20:12:17] HITS file was successfully produced:
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas 188652737 Oct 12 20:10 shared/HITS.pool.root.1
[2025-10-12 20:12:17]  *** Contents of shared directory: ***
[2025-10-12 20:12:17] total 399076
[2025-10-12 20:12:17] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 19:06 input.tar.gz
[2025-10-12 20:12:17] -rw-r--r-- 2 boincer umatlas 218491874 Oct 12 19:06 ATLAS.root_0
[2025-10-12 20:12:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:06 start_atlas.sh
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas 188652737 Oct 12 20:10 HITS.pool.root.1
[2025-10-12 20:12:17] -rw------- 1 boincer umatlas    911360 Oct 12 20:12 result.tar.gz
20:12:19 (15447): run_atlas exited; CPU time 28490.620749
20:12:19 (15447): called boinc_finish(0)

</stderr_txt>
]]>

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