Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:41 (938371): wrapper (7.7.26015): starting
19:48:42 (938371): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:48:42] Arguments: --nthreads 8
[2025-10-12 19:48:42] Threads: 8
[2025-10-12 19:48:42] Checking for CVMFS
[2025-10-12 19:48:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:48:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:48:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:48:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:48:44] 2.13.2.0 6179 6360 118568 151641 2 331 39909116 40960001 22835 16776704 0 16662624 99.940 2952271 40681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:48:44] CVMFS is ok
[2025-10-12 19:48:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:48:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:48:44] Further information can be found at the LHC@home message board.
[2025-10-12 19:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:48:44] Checking for apptainer binary...
[2025-10-12 19:48:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:48:44] Running /usr/bin/apptainer --version
[2025-10-12 19:48:45] apptainer version 1.4.3-1.el9
[2025-10-12 19:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:48:46] c-211-33-2.aglt2.org
[2025-10-12 19:48:46] apptainer works
[2025-10-12 19:48:46] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:48:46] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:48:46] Starting ATLAS job with PandaID=6840390694
[2025-10-12 19:48:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:08:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:08:25] 2025-10-13 09:07:33,015 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:08:25] 2025-10-13 09:07:33,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:08:25] 2025-10-13 09:07:33,081 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:08:25] 2025-10-13 09:07:33,102 | INFO     | sum of square deviations: 50199894406.194374
[2025-10-13 05:08:25] 2025-10-13 09:07:33,132 | INFO     | sum of deviations: 205095792153.33926
[2025-10-13 05:08:25] 2025-10-13 09:07:33,133 | INFO     | mean x: 1760329803.7100918
[2025-10-13 05:08:25] 2025-10-13 09:07:33,143 | INFO     | mean y: 2477114.211009174
[2025-10-13 05:08:25] 2025-10-13 09:07:33,144 | INFO     | -- intersect: -7189494897.158475
[2025-10-13 05:08:25] 2025-10-13 09:07:33,144 | INFO     | intersect: -7189494897.158475
[2025-10-13 05:08:25] 2025-10-13 09:07:33,145 | INFO     | chi2: 4.469993281199837
[2025-10-13 05:08:25] 2025-10-13 09:07:33,146 | INFO     | sum of square deviations: 48831045986.50925
[2025-10-13 05:08:25] 2025-10-13 09:07:33,185 | INFO     | sum of deviations: 237148712356.79608
[2025-10-13 05:08:25] 2025-10-13 09:07:33,185 | INFO     | mean x: 1760329651.2129629
[2025-10-13 05:08:25] 2025-10-13 09:07:33,185 | INFO     | mean y: 2480656.914814815
[2025-10-13 05:08:25] 2025-10-13 09:07:33,185 | INFO     | -- intersect: -8546586881.4699955
[2025-10-13 05:08:25] 2025-10-13 09:07:33,186 | INFO     | intersect: -8546586881.4699955
[2025-10-13 05:08:25] 2025-10-13 09:07:33,186 | INFO     | chi2: 3.7920494326609755
[2025-10-13 05:08:25] 2025-10-13 09:07:33,186 | INFO     | current chi2=3.7920494326609755 (change=15.166551846737628 %)
[2025-10-13 05:08:25] 2025-10-13 09:07:33,187 | INFO     | right removable region: 539
[2025-10-13 05:08:25] 2025-10-13 09:07:33,208 | INFO     | sum of square deviations: 48830876283.649864
[2025-10-13 05:08:25] 2025-10-13 09:07:33,241 | INFO     | sum of deviations: 49336702345.88328
[2025-10-13 05:08:25] 2025-10-13 09:07:33,241 | INFO     | mean x: 1760329956.2166667
[2025-10-13 05:08:25] 2025-10-13 09:07:33,241 | INFO     | mean y: 2494448.812962963
[2025-10-13 05:08:25] 2025-10-13 09:07:33,241 | INFO     | -- intersect: -1776070297.3102434
[2025-10-13 05:08:25] 2025-10-13 09:07:33,242 | INFO     | intersect: -1776070297.3102434
[2025-10-13 05:08:25] 2025-10-13 09:07:33,263 | INFO     | chi2: 1.4290587854952945
[2025-10-13 05:08:25] 2025-10-13 09:07:33,263 | INFO     | current chi2=1.4290587854952945 (change=68.02995674499748 %)
[2025-10-13 05:08:25] 2025-10-13 09:07:33,264 | INFO     | sum of square deviations: 47487073732.38134
[2025-10-13 05:08:25] 2025-10-13 09:07:33,314 | INFO     | sum of deviations: -18215965353.49534
[2025-10-13 05:08:25] 2025-10-13 09:07:33,314 | INFO     | mean x: 1760330108.717757
[2025-10-13 05:08:25] 2025-10-13 09:07:33,314 | INFO     | mean y: 2502097.420560748
[2025-10-13 05:08:25] 2025-10-13 09:07:33,314 | INFO     | -- intersect: 677761905.001661
[2025-10-13 05:08:25] 2025-10-13 09:07:33,314 | INFO     | intersect: 677761905.001661
[2025-10-13 05:08:25] 2025-10-13 09:07:33,315 | INFO     | chi2: 0.775808580429932
[2025-10-13 05:08:25] 2025-10-13 09:07:33,315 | INFO     | current chi2=0.775808580429932 (change=45.71191974016338 %)
[2025-10-13 05:08:25] 2025-10-13 09:07:33,316 | INFO     | sum of square deviations: 46168155490.61137
[2025-10-13 05:08:25] 2025-10-13 09:07:33,360 | INFO     | sum of deviations: -39723965740.65283
[2025-10-13 05:08:25] 2025-10-13 09:07:33,360 | INFO     | mean x: 1760330261.218868
[2025-10-13 05:08:25] 2025-10-13 09:07:33,360 | INFO     | mean y: 2504580.945283019
[2025-10-13 05:08:25] 2025-10-13 09:07:33,360 | INFO     | -- intersect: 1517126472.2857978
[2025-10-13 05:08:25] 2025-10-13 09:07:33,360 | INFO     | intersect: 1517126472.2857978
[2025-10-13 05:08:25] 2025-10-13 09:07:33,361 | INFO     | chi2: 0.7144198608536143
[2025-10-13 05:08:25] 2025-10-13 09:07:33,361 | INFO     | current chi2=0.7144198608536143 (change=7.912869375883634 %)
[2025-10-13 05:08:25] 2025-10-13 09:07:33,362 | INFO     | left removable region: 30
[2025-10-13 05:08:25] 2025-10-13 09:07:33,383 | INFO     | sum of square deviations: 40895122020.58559
[2025-10-13 05:08:25] 2025-10-13 09:07:33,412 | INFO     | sum of deviations: -7835188325.151285
[2025-10-13 05:08:25] 2025-10-13 09:07:33,423 | INFO     | mean x: 1760330535.7288802
[2025-10-13 05:08:25] 2025-10-13 09:07:33,423 | INFO     | mean y: 2508654.9626719058
[2025-10-13 05:08:25] 2025-10-13 09:07:33,424 | INFO     | -- intersect: 339774338.0191356
[2025-10-13 05:08:25] 2025-10-13 09:07:33,424 | INFO     | intersect: 339774338.0191356
[2025-10-13 05:08:25] 2025-10-13 09:07:33,425 | INFO     | chi2: 0.013711510027022792
[2025-10-13 05:08:25] 2025-10-13 09:07:33,425 | INFO     | -- intersect: 339774338.0191356
[2025-10-13 05:08:25] 2025-10-13 09:07:33,425 | INFO     | current memory leak: -0.19 B/s (using 509 data points, chi2=0.01)
[2025-10-13 05:08:25] 2025-10-13 09:07:33,446 | INFO     | could have reported an average CPU frequency of 2526 MHz (22 samples)
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | ..............................
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . Timing measurements:
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . get job = 0 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . initial setup = 8 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . payload setup = 61 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . stage-in = 0 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . payload execution = 33234 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . stage-out = 6 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | . log creation = 0 s
[2025-10-13 05:08:25] 2025-10-13 09:07:33,447 | INFO     | ..............................
[2025-10-13 05:08:25] 2025-10-13 09:07:33,763 | INFO     | time since job start (33433s) is within the limit (172800.0s)
[2025-10-13 05:08:25] 2025-10-13 09:07:34,148 | INFO     | 
[2025-10-13 05:08:25] 2025-10-13 09:07:34,148 | INFO     | job summary report
[2025-10-13 05:08:25] 2025-10-13 09:07:34,148 | INFO     | --------------------------------------------------
[2025-10-13 05:08:25] 2025-10-13 09:07:34,148 | INFO     | PanDA job id: 6840390694
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | task id: 46676269
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | errors: (none)
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | pilot state: finished 
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | transexitcode: 0
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | exeerrorcode: 0
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | exeerrordiag: 
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | exitcode: 0
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | exitmsg: OK
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | cpuconsumptiontime: 54457 s
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | nevents: 400
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | neventsw: 0
[2025-10-13 05:08:25] 2025-10-13 09:07:34,149 | INFO     | pid: 953216
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | pgrp: 953216
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | corecount: 8
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | event service: False
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | sizes: {0: 2348029, 2: 2348630, 3: 2348714, 4: 2348770, 5: 2348770, 6: 2349125, 17: 2349125, 29: 2349153, 40: 2349181, 44: 2349471, 52: 2349499, 33300: 2389221, 33
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | --------------------------------------------------
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | 
[2025-10-13 05:08:25] 2025-10-13 09:07:34,150 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:08:25] 2025-10-13 09:07:34,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | job 6840390694 has completed (purged errors)
[2025-10-13 05:08:25] 2025-10-13 09:07:34,268 | INFO     | overall cleanup function is called
[2025-10-13 05:08:25] 2025-10-13 09:07:35,292 | INFO     | --- collectZombieJob: --- 10, [953216]
[2025-10-13 05:08:25] 2025-10-13 09:07:35,294 | INFO     | zombie collector waiting for pid 953216
[2025-10-13 05:08:25] 2025-10-13 09:07:35,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:08:25] 2025-10-13 09:07:35,294 | INFO     | collected zombie processes
[2025-10-13 05:08:25] 2025-10-13 09:07:35,294 | INFO     | will attempt to kill all subprocesses of pid=953216
[2025-10-13 05:08:25] 2025-10-13 09:07:37,163 | INFO     | process IDs to be killed: [953216] (in reverse order)
[2025-10-13 05:08:25] 2025-10-13 09:07:37,291 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:08:25] 2025-10-13 09:07:37,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:08:25] 2025-10-13 09:07:37,340 | INFO     | did not find any defunct processes belonging to 953216
[2025-10-13 05:08:25] 2025-10-13 09:07:37,367 | INFO     | did not find any defunct processes belonging to 953216
[2025-10-13 05:08:25] 2025-10-13 09:07:37,368 | INFO     | ready for new job
[2025-10-13 05:08:25] 2025-10-13 09:07:37,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:08:25] 2025-10-13 09:07:37,373 | INFO     | ***************************************
[2025-10-13 05:08:25] 2025-10-13 09:07:37,373 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:08:25] 2025-10-13 09:07:37,373 | INFO     | ***************************************
[2025-10-13 05:08:25] 2025-10-13 09:07:37,373 | INFO     | 
[2025-10-13 05:08:25] 2025-10-13 09:07:37,380 | INFO     | architecture information:
[2025-10-13 05:08:25] 2025-10-13 09:07:37,392 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:08:25] 2025-10-13 09:07:37,451 | INFO     | cat /etc/os-release:
[2025-10-13 05:08:25] NAME="CentOS Linux"
[2025-10-13 05:08:25] VERSION="7 (Core)"
[2025-10-13 05:08:25] ID="centos"
[2025-10-13 05:08:25] ID_LIKE="rhel fedora"
[2025-10-13 05:08:25] VERSION_ID="7"
[2025-10-13 05:08:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:08:25] ANSI_COLOR="0;31"
[2025-10-13 05:08:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:08:25] HOME_URL="https://www.centos.org/"
[2025-10-13 05:08:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:08:25] 
[2025-10-13 05:08:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:08:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:08:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:08:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:08:25] 
[2025-10-13 05:08:25] 2025-10-13 09:07:37,452 | INFO     | ***************************************
[2025-10-13 05:08:25] 2025-10-13 09:07:37,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:08:25] 2025-10-13 09:07:38,029 | INFO     | sufficient remaining disk space (126979407872 B)
[2025-10-13 05:08:25] 2025-10-13 09:07:38,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:08:25] 2025-10-13 09:07:38,030 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:08:25] 2025-10-13 09:07:38,030 | INFO     | update_server=False
[2025-10-13 05:08:25] 2025-10-13 09:07:38,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:08:25] 2025-10-13 09:07:38,133 | INFO     | all data control threads have been joined
[2025-10-13 05:08:25] 2025-10-13 09:07:38,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:08:25] 2025-10-13 09:07:38,185 | INFO     | aborting loop
[2025-10-13 05:08:25] 2025-10-13 09:07:38,659 | INFO     | all job control threads have been joined
[2025-10-13 05:08:25] 2025-10-13 09:07:38,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:08:25] 2025-10-13 09:07:39,030 | INFO     | all payload control threads have been joined
[2025-10-13 05:08:25] 2025-10-13 09:07:39,036 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:39,139 | INFO     | [data] control thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:39,147 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:39,190 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:39,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:08:25] 2025-10-13 09:07:39,664 | INFO     | [job] control thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:39,741 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:39,943 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,036 | INFO     | [payload] control thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,265 | INFO     | [job] validate thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,271 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,272 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,278 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:40,353 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:41,266 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:08:25] 2025-10-13 09:07:41,305 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:07:45,277 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:08:25] 2025-10-13 09:08:08,501 | INFO     | PID=943751 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:08:25] 2025-10-13 09:08:08,501 | INFO     | .. there are 17 such processes running
[2025-10-13 05:08:25] 2025-10-13 09:08:08,502 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:08:25] 2025-10-13 09:08:08,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:08:25] 2025-10-13 09:08:08,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:08:25] 2025-10-13 09:08:18,712 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:08:25] 2025-10-13 09:08:18,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964433626944)>', '<ExcThread(monitor, started 139963656042240)>']
[2025-10-13 05:08:25] 2025-10-13 09:08:19,567 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:08:25] 2025-10-13 09:08:19,567 | INFO     | [monitor] control thread has ended
[2025-10-13 05:08:25] 2025-10-13 09:08:23,753 | INFO     | all workflow threads have been joined
[2025-10-13 05:08:25] 2025-10-13 09:08:23,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:08:25] 2025-10-13 09:08:23,774 | INFO     | traces error code: 0
[2025-10-13 05:08:25] 2025-10-13 09:08:23,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:08:25] 2025-10-13 09:08:24,331 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:08:25] 2025-10-13 09:08:24,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:08:25] 2025-10-13 09:08:24,406 [wrapper] pilotpid: 943751
[2025-10-13 05:08:25] 2025-10-13 09:08:24,434 [wrapper] Pilot exit status: 0
[2025-10-13 05:08:25] 2025-10-13 09:08:24,591 [wrapper] pandaids: 6840390694
[2025-10-13 05:08:25] 2025-10-13 09:08:24,934 [wrapper] cleanup supervisor_pilot 1940478 943752
[2025-10-13 05:08:25] 2025-10-13 09:08:24,968 [wrapper] Test setup, not cleaning
[2025-10-13 05:08:25] 2025-10-13 09:08:24,996 [wrapper] apfmon messages muted
[2025-10-13 05:08:25] 2025-10-13 09:08:25,079 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:08:25] 2025-10-13 09:08:25,113 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:08:25]  *** Error codes and diagnostics ***
[2025-10-13 05:08:25]     "exeErrorCode": 0,
[2025-10-13 05:08:25]     "exeErrorDiag": "",
[2025-10-13 05:08:25]     "pilotErrorCode": 0,
[2025-10-13 05:08:25]     "pilotErrorDiag": "",
[2025-10-13 05:08:25]  *** Listing of results directory ***
[2025-10-13 05:08:25] total 423936
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:32 queuedata.json
[2025-10-13 05:08:25] -rwx------. 1 boincer umatlas     36292 Oct 12 12:33 runpilot2-wrapper.sh
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:08:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:48 run_atlas
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:48 job.xml
[2025-10-13 05:08:25] -rw-r--r--. 2 boincer umatlas 220399141 Oct 12 19:48 EVNT.46676267._004743.pool.root.1
[2025-10-13 05:08:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:48 start_atlas.sh
[2025-10-13 05:08:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:48 shared
[2025-10-13 05:08:25] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 19:48 input.tar.gz
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:48 boinc_lockfile
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:48 pandaJob.out
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas    975603 Oct 12 19:50 agis_schedconf.cvmfs.json
[2025-10-13 05:08:25] drwx------. 5 boincer umatlas      4096 Oct 12 19:50 pilot3
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 05:01 init_data.xml
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas 200182072 Oct 13 05:05 HITS.46676269._083526.pool.root.1
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:05 boinc_task_state.xml
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas      1057 Oct 13 05:06 memory_monitor_summary.json
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas    710575 Oct 13 05:06 log.46676269._083526.job.log.tgz.1
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas      7854 Oct 13 05:07 heartbeat.json
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas        95 Oct 13 05:08 pilot_heartbeat.json
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas      4824 Oct 13 05:08 pilotlog.txt
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:08 boinc_mmap_file
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:08 wrapper_checkpoint.txt
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas   4101038 Oct 13 05:08 log.46676269._083526.job.log.1
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas       357 Oct 13 05:08 output.list
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:08 runtime_log
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas   4833280 Oct 13 05:08 result.tar.gz
[2025-10-13 05:08:25] -rw-------. 1 boincer umatlas       665 Oct 13 05:08 ZhLLDmXBES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqekNDmUnVdSn.diag
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 05:08 runtime_log.err
[2025-10-13 05:08:25] -rw-r--r--. 1 boincer umatlas     21032 Oct 13 05:08 stderr.txt
[2025-10-13 05:08:26] HITS file was successfully produced:
[2025-10-13 05:08:26] -rw-------. 1 boincer umatlas 200182072 Oct 13 05:05 shared/HITS.pool.root.1
[2025-10-13 05:08:26]  *** Contents of shared directory: ***
[2025-10-13 05:08:26] total 416028
[2025-10-13 05:08:26] -rw-r--r--. 2 boincer umatlas 220399141 Oct 12 19:48 ATLAS.root_0
[2025-10-13 05:08:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:48 start_atlas.sh
[2025-10-13 05:08:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 19:48 input.tar.gz
[2025-10-13 05:08:26] -rw-------. 1 boincer umatlas 200182072 Oct 13 05:05 HITS.pool.root.1
[2025-10-13 05:08:26] -rw-------. 1 boincer umatlas   4833280 Oct 13 05:08 result.tar.gz
05:08:27 (938371): run_atlas exited; CPU time 56020.394778
05:08:27 (938371): called boinc_finish(0)

</stderr_txt>
]]>

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