Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:51:50 (3139452): wrapper (7.7.26015): starting
09:51:50 (3139452): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:51:50] Arguments: --nthreads 3
[2025-10-13 09:51:50] Threads: 3
[2025-10-13 09:51:50] Checking for CVMFS
[2025-10-13 09:51:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:51:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:51:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:51:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:51:50] 2.9.2.0 1511920 5454 84632 151653 0 57 29289411 36864001 0 130560 0 4273887 99.991 184135 820 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:51:50] CVMFS is ok
[2025-10-13 09:51:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:51:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:51:50] Further information can be found at the LHC@home message board.
[2025-10-13 09:51:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:51:50] Checking for apptainer binary...
[2025-10-13 09:51:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:51:50] Running /usr/bin/apptainer --version
[2025-10-13 09:51:50] apptainer version 1.4.1-1.1
[2025-10-13 09:51:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:51:50] thA327
[2025-10-13 09:51:50] apptainer works
[2025-10-13 09:51:50] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:51:50] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:51:50] Starting ATLAS job with PandaID=6840181380
[2025-10-13 09:51:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:14:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:14:07] 2025-10-13 09:13:08,999 | INFO     | update_server=False
[2025-10-13 11:14:07] 2025-10-13 09:13:08,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:14:07] 2025-10-13 09:13:08,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:14:07] 2025-10-13 09:13:08,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:14:07] 2025-10-13 09:13:09,184 | INFO     | all payload control threads have been joined
[2025-10-13 11:14:07] 2025-10-13 09:13:09,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:14:07] 2025-10-13 09:13:09,780 | INFO     | aborting loop
[2025-10-13 11:14:07] 2025-10-13 09:13:09,896 | INFO     | all job control threads have been joined
[2025-10-13 11:14:07] 2025-10-13 09:13:10,001 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,004 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,093 | INFO     | all data control threads have been joined
[2025-10-13 11:14:07] 2025-10-13 09:13:10,100 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,185 | INFO     | [payload] control thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,728 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,786 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,902 | INFO     | [job] control thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:10,913 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,004 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,099 | INFO     | [data] control thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,413 | INFO     | [job] validate thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,493 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,494 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,569 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:11,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:14:07] 2025-10-13 09:13:15,652 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:20,046 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:14:07] 2025-10-13 09:13:21,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:14:07] 2025-10-13 09:13:39,527 | INFO     | PID=3143166 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:14:07] 2025-10-13 09:13:39,528 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:14:07] 2025-10-13 09:13:39,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:14:07] 2025-10-13 09:13:39,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:14:07] 2025-10-13 09:14:00,651 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:14:07] 2025-10-13 09:14:02,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427287979840)>', '<ExcThread(monitor, started 140426942068480)>']
[2025-10-13 11:14:07] 2025-10-13 09:14:02,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:14:07] 2025-10-13 09:14:02,650 | INFO     | [monitor] control thread has ended
[2025-10-13 11:14:07] 2025-10-13 09:14:07,280 | INFO     | all workflow threads have been joined
[2025-10-13 11:14:07] 2025-10-13 09:14:07,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:14:07] 2025-10-13 09:14:07,281 | INFO     | traces error code: 0
[2025-10-13 11:14:07] 2025-10-13 09:14:07,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:14:07] 2025-10-13 09:14:07,330 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:14:07] 2025-10-13 09:14:07,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:14:07] 2025-10-13 09:14:07,334 [wrapper] pilotpid: 3143166
[2025-10-13 11:14:07] 2025-10-13 09:14:07,336 [wrapper] Pilot exit status: 0
[2025-10-13 11:14:07] 2025-10-13 09:14:07,343 [wrapper] pandaids: 6840181380
[2025-10-13 11:14:07] 2025-10-13 09:14:07,361 [wrapper] cleanup supervisor_pilot 3161612 3143167
[2025-10-13 11:14:07] 2025-10-13 09:14:07,363 [wrapper] Test setup, not cleaning
[2025-10-13 11:14:07] 2025-10-13 09:14:07,366 [wrapper] apfmon messages muted
[2025-10-13 11:14:07] 2025-10-13 09:14:07,368 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:14:07] 2025-10-13 09:14:07,370 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:14:07]  *** Error codes and diagnostics ***
[2025-10-13 11:14:07]     "exeErrorCode": 0,
[2025-10-13 11:14:07]     "exeErrorDiag": "",
[2025-10-13 11:14:07]     "pilotErrorCode": 0,
[2025-10-13 11:14:07]     "pilotErrorDiag": "",
[2025-10-13 11:14:07]  *** Listing of results directory ***
[2025-10-13 11:14:07] total 406192
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 11:14:07] -rwx------ 1 boinc boinc     36292 Oct 12 16:11 runpilot2-wrapper.sh
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:11 queuedata.json
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:14:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:51 run_atlas
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:51 job.xml
[2025-10-13 11:14:07] -rw-r--r-- 2 boinc boinc 219509023 Oct 13 09:51 EVNT.46676267._004216.pool.root.1
[2025-10-13 11:14:07] -rw-r--r-- 2 boinc boinc    569680 Oct 13 09:51 input.tar.gz
[2025-10-13 11:14:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:51 start_atlas.sh
[2025-10-13 11:14:07] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:51 shared
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:51 boinc_setup_complete
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc      6446 Oct 13 09:51 init_data.xml
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:51 boinc_lockfile
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:51 pandaJob.out
[2025-10-13 11:14:07] -rw------- 1 boinc boinc    972849 Oct 13 09:51 agis_schedconf.cvmfs.json
[2025-10-13 11:14:07] -rw------- 1 boinc boinc   1560580 Oct 13 09:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:14:07] drwx------ 5 boinc boinc      4096 Oct 13 09:51 pilot3
[2025-10-13 11:14:07] -rw------- 1 boinc boinc 190628257 Oct 13 11:12 HITS.46676269._080339.pool.root.1
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc       530 Oct 13 11:12 boinc_task_state.xml
[2025-10-13 11:14:07] -rw------- 1 boinc boinc      1013 Oct 13 11:12 memory_monitor_summary.json
[2025-10-13 11:14:07] -rw------- 1 boinc boinc    242641 Oct 13 11:13 log.46676269._080339.job.log.tgz.1
[2025-10-13 11:14:07] -rw------- 1 boinc boinc      7750 Oct 13 11:13 heartbeat.json
[2025-10-13 11:14:07] -rw------- 1 boinc boinc        95 Oct 13 11:13 pilot_heartbeat.json
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:14 boinc_mmap_file
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:14 wrapper_checkpoint.txt
[2025-10-13 11:14:07] -rw------- 1 boinc boinc      4824 Oct 13 11:14 pilotlog.txt
[2025-10-13 11:14:07] -rw------- 1 boinc boinc    715965 Oct 13 11:14 log.46676269._080339.job.log.1
[2025-10-13 11:14:07] -rw------- 1 boinc boinc       357 Oct 13 11:14 output.list
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:14 runtime_log
[2025-10-13 11:14:07] -rw------- 1 boinc boinc    972800 Oct 13 11:14 result.tar.gz
[2025-10-13 11:14:07] -rw------- 1 boinc boinc       658 Oct 13 11:14 uYwNDmgyBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWBkNDmVtehDn.diag
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:14 runtime_log.err
[2025-10-13 11:14:07] -rw-r--r-- 1 boinc boinc      7508 Oct 13 11:14 stderr.txt
[2025-10-13 11:14:07] HITS file was successfully produced:
[2025-10-13 11:14:07] -rw------- 1 boinc boinc 190628257 Oct 13 11:12 shared/HITS.pool.root.1
[2025-10-13 11:14:07]  *** Contents of shared directory: ***
[2025-10-13 11:14:07] total 402068
[2025-10-13 11:14:07] -rw-r--r-- 2 boinc boinc 219509023 Oct 13 09:51 ATLAS.root_0
[2025-10-13 11:14:07] -rw-r--r-- 2 boinc boinc    569680 Oct 13 09:51 input.tar.gz
[2025-10-13 11:14:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:51 start_atlas.sh
[2025-10-13 11:14:07] -rw------- 1 boinc boinc 190628257 Oct 13 11:12 HITS.pool.root.1
[2025-10-13 11:14:07] -rw------- 1 boinc boinc    972800 Oct 13 11:14 result.tar.gz
11:14:08 (3139452): run_atlas exited; CPU time 13847.303011
11:14:08 (3139452): called boinc_finish(0)

</stderr_txt>
]]>

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