Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:34 (2525562): wrapper (7.7.26015): starting
10:16:34 (2525562): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 10:16:34] Arguments: --nthreads 2
[2025-10-13 10:16:34] Threads: 2
[2025-10-13 10:16:34] Checking for CVMFS
[2025-10-13 10:16:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:16:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:16:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:16:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:16:35] 2.9.2.0 1266339 5502 59780 151653 0 57 27605503 36864000 0 130560 0 3322355 99.989 184826 693 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:16:35] CVMFS is ok
[2025-10-13 10:16:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:16:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:16:35] Further information can be found at the LHC@home message board.
[2025-10-13 10:16:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:16:35] Checking for apptainer binary...
[2025-10-13 10:16:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:16:35] Running /usr/bin/apptainer --version
[2025-10-13 10:16:35] apptainer version 1.4.1-1.1
[2025-10-13 10:16:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:16:35] atlasA219
[2025-10-13 10:16:35] apptainer works
[2025-10-13 10:16:35] Set ATHENA_PROC_NUMBER=2
[2025-10-13 10:16:35] Set ATHENA_CORE_NUMBER=2
[2025-10-13 10:16:35] Starting ATLAS job with PandaID=6837595074
[2025-10-13 10:16:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:14:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:14:20] 2025-10-13 10:13:50,507 | INFO     | update_server=False
[2025-10-13 12:14:20] 2025-10-13 10:13:50,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:14:20] 2025-10-13 10:13:50,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:14:20] 2025-10-13 10:13:50,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:14:20] 2025-10-13 10:13:50,508 | INFO     | aborting loop
[2025-10-13 12:14:20] 2025-10-13 10:13:50,747 | INFO     | all data control threads have been joined
[2025-10-13 12:14:20] 2025-10-13 10:13:50,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:14:20] 2025-10-13 10:13:51,247 | INFO     | all job control threads have been joined
[2025-10-13 12:14:20] 2025-10-13 10:13:51,513 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:51,514 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:51,514 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:51,753 | INFO     | [data] control thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:51,837 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:51,933 | INFO     | all payload control threads have been joined
[2025-10-13 12:14:20] 2025-10-13 10:13:51,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,253 | INFO     | [job] control thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,494 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,632 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,762 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,894 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,908 | INFO     | [job] validate thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:14:20] 2025-10-13 10:13:52,934 | INFO     | [payload] control thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:52,998 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:56,916 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:13:58,502 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:14:20] 2025-10-13 10:14:00,569 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:14:20] 2025-10-13 10:14:01,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:14:20] 2025-10-13 10:14:01,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815796098880)>', '<ExcThread(monitor, started 139815429314304)>']
[2025-10-13 12:14:20] 2025-10-13 10:14:06,993 | INFO     | all workflow threads have been joined
[2025-10-13 12:14:20] 2025-10-13 10:14:06,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:14:20] 2025-10-13 10:14:06,994 | INFO     | traces error code: 0
[2025-10-13 12:14:20] 2025-10-13 10:14:06,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:14:20] 2025-10-13 10:14:20,672 | INFO     | PID=2529265 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:14:20] 2025-10-13 10:14:20,672 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:14:20] 2025-10-13 10:14:20,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:14:20] 2025-10-13 10:14:20,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:14:20] 2025-10-13 10:14:20,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:14:20] 2025-10-13 10:14:20,672 | INFO     | [monitor] control thread has ended
[2025-10-13 12:14:20] 2025-10-13 10:14:20,715 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:14:20] 2025-10-13 10:14:20,718 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:14:20] 2025-10-13 10:14:20,721 [wrapper] pilotpid: 2529265
[2025-10-13 12:14:20] 2025-10-13 10:14:20,723 [wrapper] Pilot exit status: 0
[2025-10-13 12:14:20] 2025-10-13 10:14:20,730 [wrapper] pandaids: 6837595074
[2025-10-13 12:14:20] 2025-10-13 10:14:20,744 [wrapper] cleanup supervisor_pilot 2550047 2529266
[2025-10-13 12:14:20] 2025-10-13 10:14:20,746 [wrapper] Test setup, not cleaning
[2025-10-13 12:14:20] 2025-10-13 10:14:20,749 [wrapper] apfmon messages muted
[2025-10-13 12:14:20] 2025-10-13 10:14:20,751 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:14:20] 2025-10-13 10:14:20,754 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:14:20]  *** Error codes and diagnostics ***
[2025-10-13 12:14:20]     "exeErrorCode": 0,
[2025-10-13 12:14:20]     "exeErrorDiag": "",
[2025-10-13 12:14:20]     "pilotErrorCode": 0,
[2025-10-13 12:14:20]     "pilotErrorDiag": "",
[2025-10-13 12:14:20]  *** Listing of results directory ***
[2025-10-13 12:14:20] total 406532
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc    557409 Oct 10 12:29 pilot3.tar.gz
[2025-10-13 12:14:20] -rwx------ 1 boinc boinc     36292 Oct 10 12:36 runpilot2-wrapper.sh
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc      5112 Oct 10 12:36 queuedata.json
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:14:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:16 run_atlas
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:16 job.xml
[2025-10-13 12:14:20] -rw-r--r-- 2 boinc boinc 222141831 Oct 13 10:16 EVNT.46676267._001503.pool.root.1
[2025-10-13 12:14:20] -rw-r--r-- 2 boinc boinc    569681 Oct 13 10:16 input.tar.gz
[2025-10-13 12:14:20] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:16 start_atlas.sh
[2025-10-13 12:14:20] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:16 shared
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:16 boinc_setup_complete
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc      6208 Oct 13 10:16 init_data.xml
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:16 boinc_lockfile
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc      2549 Oct 13 10:16 pandaJob.out
[2025-10-13 12:14:20] -rw------- 1 boinc boinc    972849 Oct 13 10:16 agis_schedconf.cvmfs.json
[2025-10-13 12:14:20] -rw------- 1 boinc boinc   1560580 Oct 13 10:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:14:20] drwx------ 5 boinc boinc      4096 Oct 13 10:16 pilot3
[2025-10-13 12:14:20] -rw------- 1 boinc boinc 187659759 Oct 13 12:13 HITS.46676269._036996.pool.root.1
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:13 boinc_task_state.xml
[2025-10-13 12:14:20] -rw------- 1 boinc boinc        95 Oct 13 12:13 pilot_heartbeat.json
[2025-10-13 12:14:20] -rw------- 1 boinc boinc      1016 Oct 13 12:13 memory_monitor_summary.json
[2025-10-13 12:14:20] -rw------- 1 boinc boinc    261818 Oct 13 12:13 log.46676269._036996.job.log.tgz.1
[2025-10-13 12:14:20] -rw------- 1 boinc boinc      7776 Oct 13 12:13 heartbeat.json
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:14 boinc_mmap_file
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:14 wrapper_checkpoint.txt
[2025-10-13 12:14:20] -rw------- 1 boinc boinc       747 Oct 13 12:14 pilotlog.txt
[2025-10-13 12:14:20] -rw------- 1 boinc boinc   1043594 Oct 13 12:14 log.46676269._036996.job.log.1
[2025-10-13 12:14:20] -rw------- 1 boinc boinc       357 Oct 13 12:14 output.list
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:14 runtime_log
[2025-10-13 12:14:20] -rw------- 1 boinc boinc   1320960 Oct 13 12:14 result.tar.gz
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc      8792 Oct 13 12:14 runtime_log.err
[2025-10-13 12:14:20] -rw------- 1 boinc boinc       662 Oct 13 12:14 P4BNDm6ePR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn4cNDmWQ5ljm.diag
[2025-10-13 12:14:20] -rw-r--r-- 1 boinc boinc      7511 Oct 13 12:14 stderr.txt
[2025-10-13 12:14:20] HITS file was successfully produced:
[2025-10-13 12:14:20] -rw------- 1 boinc boinc 187659759 Oct 13 12:13 shared/HITS.pool.root.1
[2025-10-13 12:14:20]  *** Contents of shared directory: ***
[2025-10-13 12:14:20] total 402076
[2025-10-13 12:14:20] -rw-r--r-- 2 boinc boinc 222141831 Oct 13 10:16 ATLAS.root_0
[2025-10-13 12:14:20] -rw-r--r-- 2 boinc boinc    569681 Oct 13 10:16 input.tar.gz
[2025-10-13 12:14:20] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:16 start_atlas.sh
[2025-10-13 12:14:20] -rw------- 1 boinc boinc 187659759 Oct 13 12:13 HITS.pool.root.1
[2025-10-13 12:14:20] -rw------- 1 boinc boinc   1320960 Oct 13 12:14 result.tar.gz
12:14:43 (2525562): run_atlas exited; CPU time 13639.354365
12:14:43 (2525562): called boinc_finish(0)

</stderr_txt>
]]>

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