Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:39 (18760): wrapper (7.7.26015): starting
18:56:39 (18760): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:56:39] Arguments: --nthreads 12
[2025-10-12 18:56:39] Threads: 12
[2025-10-12 18:56:39] Checking for CVMFS
[2025-10-12 18:56:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:56:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:56:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:56:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:56:40] 2.11.2.0 2913 223510 100672 151640 2 59 15681308 20275200 1 130560 1 109570393 99.984 13352142 12553 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:56:40] CVMFS is ok
[2025-10-12 18:56:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:56:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:56:40] Further information can be found at the LHC@home message board.
[2025-10-12 18:56:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:56:40] Checking for apptainer binary...
[2025-10-12 18:56:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:56:40] Running /usr/bin/apptainer --version
[2025-10-12 18:56:40] apptainer version 1.3.2-1.el7
[2025-10-12 18:56:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:56:41] c-205-6.aglt2.org
[2025-10-12 18:56:41] apptainer works
[2025-10-12 18:56:41] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:56:41] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:56:41] Starting ATLAS job with PandaID=6840750695
[2025-10-12 18:56:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:10:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:10:09]  storage_token=
[2025-10-12 20:10:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840750695/log.46676269._089914.job.log.tgz.1
[2025-10-12 20:10:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/f9/log.46676269._089914.job.log.tgz.1
[2025-10-12 20:10:09]  workdir=None
[2025-10-12 20:10:09] ]
[2025-10-12 20:10:09] 2025-10-13 00:09:07,377 | INFO     | transferring file log.46676269._089914.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840750695/log.46676269._089914.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 20:10:09] 2025-10-13 00:09:07,377 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840750695/log.46676269._089914.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._089914.job
[2025-10-12 20:10:09] 2025-10-13 00:09:07,398 | INFO     | adding to output.list: log.46676269._089914.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/f9/log.46676269._089914.job.log.tg
[2025-10-12 20:10:09] 2025-10-13 00:09:07,399 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:10:09] 2025-10-13 00:09:07,399 | INFO     | summary of transferred files:
[2025-10-12 20:10:09] 2025-10-13 00:09:07,399 | INFO     |  -- lfn=log.46676269._089914.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:10:09] 2025-10-13 00:09:07,400 | INFO     | stage-out finished correctly
[2025-10-12 20:10:09] 2025-10-13 00:09:07,884 | INFO     | monitor loop #322: job 0:6840750695 is in state 'finished'
[2025-10-12 20:10:09] 2025-10-13 00:09:07,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:10:09] 2025-10-13 00:09:08,187 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:10:09] 2025-10-13 00:09:08,198 | INFO     | time since job start (4332s) is within the limit (172800.0s)
[2025-10-12 20:10:09] 2025-10-13 00:09:10,208 | INFO     | time since job start (4334s) is within the limit (172800.0s)
[2025-10-12 20:10:09] 2025-10-13 00:09:10,387 | INFO     | monitor loop #323: job 0:6840750695 is in state 'finished'
[2025-10-12 20:10:09] 2025-10-13 00:09:10,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:10:09] 2025-10-13 00:09:10,779 | INFO     | job 6840750695 has state=finished
[2025-10-12 20:10:09] 2025-10-13 00:09:10,779 | INFO     | preparing for final server update for job 6840750695 in state='finished'
[2025-10-12 20:10:09] 2025-10-13 00:09:10,780 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:10:09] 2025-10-13 00:09:10,780 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:10:09] 2025-10-13 00:09:10,780 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:10:09] 2025-10-13 00:09:10,781 | INFO     | job 6840750695 has finished - writing final server update
[2025-10-12 20:10:09] 2025-10-13 00:09:10,781 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:10:09] 2025-10-13 00:09:10,783 | INFO     | executing command: lscpu
[2025-10-12 20:10:09] 2025-10-13 00:09:10,814 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:10:09] 2025-10-13 00:09:12,213 | INFO     | time since job start (4336s) is within the limit (172800.0s)
[2025-10-12 20:10:09] 2025-10-13 00:09:12,890 | INFO     | monitor loop #324: job 0:6840750695 is in state 'finished'
[2025-10-12 20:10:09] 2025-10-13 00:09:12,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:10:09] 2025-10-13 00:09:14,218 | INFO     | time since job start (4338s) is within the limit (172800.0s)
[2025-10-12 20:10:09] 2025-10-13 00:09:15,393 | INFO     | monitor loop #325: job 0:6840750695 is in state 'finished'
[2025-10-12 20:10:09] 2025-10-13 00:09:15,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:10:09] 2025-10-13 00:09:15,457 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 20:10:09] 2025-10-13 00:09:15,460 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-12 20:10:09] 2025-10-13 00:09:15,462 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750695/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:10:09] 2025-10-13 00:09:15,462 | INFO     | extracted standard info from prmon json
[2025-10-12 20:10:09] 2025-10-13 00:09:15,462 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:10:09] 2025-10-13 00:09:15,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:10:09] 2025-10-13 00:09:15,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:10:09] 2025-10-13 00:09:15,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:10:09] 2025-10-13 00:09:15,464 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:10:09] 2025-10-13 00:09:15,464 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | sum of deviations: -5996346055.0
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | mean x: 1760312071.5
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | mean y: 2754595.84375
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | -- intersect: 129889265783.06525
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | intersect: 129889265783.06525
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | chi2: 0.08060240387545152
[2025-10-12 20:10:09] 2025-10-13 00:09:15,465 | INFO     | -- intersect: 129889265783.06525
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | current memory leak: -73.79 B/s (using 64 data points, chi2=0.08)
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | could have reported an average CPU frequency of 2023 MHz (6 samples)
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | ..............................
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | . Timing measurements:
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | . get job = 0 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | . initial setup = 2 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,466 | INFO     | . payload setup = 7 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,467 | INFO     | . stage-in = 0 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,467 | INFO     | . payload execution = 4302 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,467 | INFO     | . stage-out = 0 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,467 | INFO     | . log creation = 0 s
[2025-10-12 20:10:09] 2025-10-13 00:09:15,467 | INFO     | ..............................
[2025-10-12 20:10:09] 2025-10-13 00:09:16,033 | INFO     | 
[2025-10-12 20:10:09] 2025-10-13 00:09:16,033 | INFO     | job summary report
[2025-10-12 20:10:09] 2025-10-13 00:09:16,033 | INFO     | --------------------------------------------------
[2025-10-12 20:10:09] 2025-10-13 00:09:16,033 | INFO     | PanDA job id: 6840750695
[2025-10-12 20:10:09] 2025-10-13 00:09:16,033 | INFO     | task id: 46676269
[2025-10-12 20:10:09] 2025-10-13 00:09:16,033 | INFO     | errors: (none)
[2025-10-12 20:10:09] 2025-10-13 00:09:16,034 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:10:09] 2025-10-13 00:09:16,034 | INFO     | pilot state: finished 
[2025-10-12 20:10:09] 2025-10-13 00:09:16,034 | INFO     | transexitcode: 0
[2025-10-12 20:10:09] 2025-10-13 00:09:16,034 | INFO     | exeerrorcode: 0
[2025-10-12 20:10:09] 2025-10-13 00:09:16,034 | INFO     | exeerrordiag: 
[2025-10-12 20:10:09] 2025-10-13 00:09:16,034 | INFO     | exitcode: 0
[2025-10-12 20:10:09] 2025-10-13 00:09:16,035 | INFO     | exitmsg: OK
[2025-10-12 20:10:09] 2025-10-13 00:09:16,035 | INFO     | cpuconsumptiontime: 45800 s
[2025-10-12 20:10:09] 2025-10-13 00:09:16,035 | INFO     | nevents: 400
[2025-10-12 20:10:09] 2025-10-13 00:09:16,035 | INFO     | neventsw: 0
[2025-10-12 20:10:09] 2025-10-13 00:09:16,035 | INFO     | pid: 28946
[2025-10-12 20:10:09] 2025-10-13 00:09:16,035 | INFO     | pgrp: 28946
[2025-10-12 20:10:09] 2025-10-13 00:09:16,036 | INFO     | corecount: 12
[2025-10-12 20:10:09] 2025-10-13 00:09:16,036 | INFO     | event service: False
[2025-10-12 20:10:09] 2025-10-13 00:09:16,036 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 4312: 2375181, 4313: 2375180, 4315: 2384418, 4323: 2384556}
[2025-10-12 20:10:09] 2025-10-13 00:09:16,036 | INFO     | --------------------------------------------------
[2025-10-12 20:10:09] 2025-10-13 00:09:16,036 | INFO     | 
[2025-10-12 20:10:09] 2025-10-13 00:09:16,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | job 6840750695 has completed (purged errors)
[2025-10-12 20:10:09] 2025-10-13 00:09:16,081 | INFO     | overall cleanup function is called
[2025-10-12 20:10:09] 2025-10-13 00:09:17,089 | INFO     | --- collectZombieJob: --- 10, [28946]
[2025-10-12 20:10:09] 2025-10-13 00:09:17,089 | INFO     | zombie collector waiting for pid 28946
[2025-10-12 20:10:09] 2025-10-13 00:09:17,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:10:09] 2025-10-13 00:09:17,089 | INFO     | collected zombie processes
[2025-10-12 20:10:09] 2025-10-13 00:09:17,089 | INFO     | will attempt to kill all subprocesses of pid=28946
[2025-10-12 20:10:09] 2025-10-13 00:09:17,185 | INFO     | process IDs to be killed: [28946] (in reverse order)
[2025-10-12 20:10:09] 2025-10-13 00:09:17,237 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:10:09] 2025-10-13 00:09:17,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:10:09] 2025-10-13 00:09:17,240 | INFO     | did not find any defunct processes belonging to 28946
[2025-10-12 20:10:09] 2025-10-13 00:09:17,244 | INFO     | did not find any defunct processes belonging to 28946
[2025-10-12 20:10:09] 2025-10-13 00:09:17,244 | INFO     | ready for new job
[2025-10-12 20:10:09] 2025-10-13 00:09:17,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:10:09] 2025-10-13 00:09:17,246 | INFO     | ***************************************
[2025-10-12 20:10:09] 2025-10-13 00:09:17,246 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:10:09] 2025-10-13 00:09:17,246 | INFO     | ***************************************
[2025-10-12 20:10:09] 2025-10-13 00:09:17,246 | INFO     | 
[2025-10-12 20:10:09] 2025-10-13 00:09:17,247 | INFO     | architecture information:
[2025-10-12 20:10:09] 2025-10-13 00:09:17,248 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:10:09] 2025-10-13 00:09:17,263 | INFO     | cat /etc/os-release:
[2025-10-12 20:10:09] NAME="CentOS Linux"
[2025-10-12 20:10:09] VERSION="7 (Core)"
[2025-10-12 20:10:09] ID="centos"
[2025-10-12 20:10:09] ID_LIKE="rhel fedora"
[2025-10-12 20:10:09] VERSION_ID="7"
[2025-10-12 20:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:10:09] ANSI_COLOR="0;31"
[2025-10-12 20:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:10:09] HOME_URL="https://www.centos.org/"
[2025-10-12 20:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:10:09] 
[2025-10-12 20:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:10:09] 
[2025-10-12 20:10:09] 2025-10-13 00:09:17,264 | INFO     | ***************************************
[2025-10-12 20:10:09] 2025-10-13 00:09:17,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:10:09] 2025-10-13 00:09:17,783 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-10-12 20:10:09] 2025-10-13 00:09:17,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:10:09] 2025-10-13 00:09:17,783 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:10:09] 2025-10-13 00:09:17,784 | INFO     | update_server=False
[2025-10-12 20:10:09] 2025-10-13 00:09:17,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:10:09] 2025-10-13 00:09:17,896 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:10:09] 2025-10-13 00:09:17,897 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:10:09] 2025-10-13 00:09:17,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:10:09] 2025-10-13 00:09:17,897 | INFO     | will abort loop
[2025-10-12 20:10:09] 2025-10-13 00:09:18,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:10:09] 2025-10-13 00:09:18,393 | INFO     | all job control threads have been joined
[2025-10-12 20:10:09] 2025-10-13 00:09:18,513 | INFO     | all data control threads have been joined
[2025-10-12 20:10:09] 2025-10-13 00:09:18,680 | INFO     | all payload control threads have been joined
[2025-10-12 20:10:09] 2025-10-13 00:09:18,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:10:09] 2025-10-13 00:09:18,789 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:18,903 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,308 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,318 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,399 | INFO     | [job] control thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,412 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,518 | INFO     | [data] control thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,610 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,685 | INFO     | [payload] control thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:19,945 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:20,015 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:20,186 | INFO     | [job] validate thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:20,196 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:20,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:10:09] 2025-10-13 00:09:21,564 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:22,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:28,047 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:10:09] 2025-10-13 00:09:29,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:10:09] 2025-10-13 00:09:47,418 | INFO     | PID=22429 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:10:09] 2025-10-13 00:09:47,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:10:09] 2025-10-13 00:09:47,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:10:09] 2025-10-13 00:09:47,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:10:09] 2025-10-13 00:10:02,929 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:10:09] 2025-10-13 00:10:03,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683541342016)>', '<ExcThread(monitor, started 140682593302272)>']
[2025-10-12 20:10:09] 2025-10-13 00:10:04,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:10:09] 2025-10-13 00:10:04,501 | INFO     | [monitor] control thread has ended
[2025-10-12 20:10:09] 2025-10-13 00:10:08,882 | INFO     | all workflow threads have been joined
[2025-10-12 20:10:09] 2025-10-13 00:10:08,882 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:10:09] 2025-10-13 00:10:08,882 | INFO     | traces error code: 0
[2025-10-12 20:10:09] 2025-10-13 00:10:08,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:10:09] 2025-10-13 00:10:08,967 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:10:09] 2025-10-13 00:10:08,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:10:09] 2025-10-13 00:10:08,974 [wrapper] pilotpid: 22429
[2025-10-12 20:10:09] 2025-10-13 00:10:08,978 [wrapper] Pilot exit status: 0
[2025-10-12 20:10:09] 2025-10-13 00:10:08,992 [wrapper] pandaids: 6840750695
[2025-10-12 20:10:09] 2025-10-13 00:10:09,038 [wrapper] cleanup supervisor_pilot 29733 22430
[2025-10-12 20:10:09] 2025-10-13 00:10:09,043 [wrapper] Test setup, not cleaning
[2025-10-12 20:10:09] 2025-10-13 00:10:09,046 [wrapper] apfmon messages muted
[2025-10-12 20:10:09] 2025-10-13 00:10:09,050 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:10:09] 2025-10-13 00:10:09,054 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:10:09]  *** Error codes and diagnostics ***
[2025-10-12 20:10:09]     "exeErrorCode": 0,
[2025-10-12 20:10:09]     "exeErrorDiag": "",
[2025-10-12 20:10:09]     "pilotErrorCode": 0,
[2025-10-12 20:10:09]     "pilotErrorDiag": "",
[2025-10-12 20:10:09]  *** Listing of results directory ***
[2025-10-12 20:10:09] total 411080
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-12 20:10:09] -rwx------ 1 boincer umatlas     36292 Oct 12 17:23 runpilot2-wrapper.sh
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:23 queuedata.json
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:10:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:56 run_atlas
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:56 job.xml
[2025-10-12 20:10:09] -rw-r--r-- 2 boincer umatlas 221076790 Oct 12 18:56 EVNT.46676267._004829.pool.root.1
[2025-10-12 20:10:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:56 start_atlas.sh
[2025-10-12 20:10:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:56 shared
[2025-10-12 20:10:09] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 18:56 input.tar.gz
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:56 boinc_lockfile
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 18:56 pandaJob.out
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas    975603 Oct 12 18:56 agis_schedconf.cvmfs.json
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas   1560580 Oct 12 18:56 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:10:09] drwx------ 5 boincer umatlas      4096 Oct 12 18:56 pilot3
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 20:03 init_data.xml
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas 193933704 Oct 12 20:08 HITS.46676269._089914.pool.root.1
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas       529 Oct 12 20:08 boinc_task_state.xml
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas        95 Oct 12 20:08 pilot_heartbeat.json
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas      1049 Oct 12 20:09 memory_monitor_summary.json
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas    388416 Oct 12 20:09 log.46676269._089914.job.log.tgz.1
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas      7856 Oct 12 20:09 heartbeat.json
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas        27 Oct 12 20:09 wrapper_checkpoint.txt
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:09 boinc_mmap_file
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas      5004 Oct 12 20:10 pilotlog.txt
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas    630777 Oct 12 20:10 log.46676269._089914.job.log.1
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas       357 Oct 12 20:10 output.list
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:10 runtime_log
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas   1034240 Oct 12 20:10 result.tar.gz
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 20:10 runtime_log.err
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas       658 Oct 12 20:10 pRcKDmwiIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPelNDm11h2Yn.diag
[2025-10-12 20:10:09] -rw-r--r-- 1 boincer umatlas     22148 Oct 12 20:10 stderr.txt
[2025-10-12 20:10:09] HITS file was successfully produced:
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas 193933704 Oct 12 20:08 shared/HITS.pool.root.1
[2025-10-12 20:10:09]  *** Contents of shared directory: ***
[2025-10-12 20:10:09] total 406880
[2025-10-12 20:10:09] -rw-r--r-- 2 boincer umatlas 221076790 Oct 12 18:56 ATLAS.root_0
[2025-10-12 20:10:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:56 start_atlas.sh
[2025-10-12 20:10:09] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 18:56 input.tar.gz
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas 193933704 Oct 12 20:08 HITS.pool.root.1
[2025-10-12 20:10:09] -rw------- 1 boincer umatlas   1034240 Oct 12 20:10 result.tar.gz
20:10:10 (18760): run_atlas exited; CPU time 45781.997342
20:10:10 (18760): called boinc_finish(0)

</stderr_txt>
]]>

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