Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:57:29 (314818): wrapper (7.7.26015): starting
18:57:29 (314818): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:57:29] Arguments: --nthreads 8
[2025-10-12 18:57:29] Threads: 8
[2025-10-12 18:57:29] Checking for CVMFS
[2025-10-12 18:57:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:57:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:57:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:57:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:57:30] 2.13.2.0 3269412 36356 393700 151640 3 817 38081966 40960001 31787 16776704 0 468575803 99.848 185472368 36762 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:57:30] CVMFS is ok
[2025-10-12 18:57:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:57:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:57:30] Further information can be found at the LHC@home message board.
[2025-10-12 18:57:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:57:30] Checking for apptainer binary...
[2025-10-12 18:57:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:57:30] Running /usr/bin/apptainer --version
[2025-10-12 18:57:30] apptainer version 1.4.3-1.el9
[2025-10-12 18:57:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:57:31] c8-16-2.aglt2.org
[2025-10-12 18:57:31] apptainer works
[2025-10-12 18:57:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:57:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:57:31] Starting ATLAS job with PandaID=6840392430
[2025-10-12 18:57:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:55:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:55:28] 2025-10-12 23:54:41,718 | INFO     | transferring file log.46676269._083891.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6840392430/log.46676269._083891.job.log.tgz.1 to /tmp/boinchome/slots
[2025-10-12 19:55:28] 2025-10-12 23:54:41,718 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6840392430/log.46676269._083891.job.log.tgz.1 /tmp/boinchome/slots/11/log.46676269._083891.j
[2025-10-12 19:55:28] 2025-10-12 23:54:41,744 | INFO     | adding to output.list: log.46676269._083891.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/2d/log.46676269._083891.job.log.tg
[2025-10-12 19:55:28] 2025-10-12 23:54:41,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:55:28] 2025-10-12 23:54:41,745 | INFO     | summary of transferred files:
[2025-10-12 19:55:28] 2025-10-12 23:54:41,745 | INFO     |  -- lfn=log.46676269._083891.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:55:28] 2025-10-12 23:54:41,745 | INFO     | stage-out finished correctly
[2025-10-12 19:55:28] 2025-10-12 23:54:41,798 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:55:28] 2025-10-12 23:54:41,911 | INFO     | time since job start (3395s) is within the limit (172800.0s)
[2025-10-12 19:55:28] 2025-10-12 23:54:43,792 | INFO     | job 6840392430 has state=finished
[2025-10-12 19:55:28] 2025-10-12 23:54:43,792 | INFO     | preparing for final server update for job 6840392430 in state='finished'
[2025-10-12 19:55:28] 2025-10-12 23:54:43,792 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:55:28] 2025-10-12 23:54:43,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:55:28] 2025-10-12 23:54:43,793 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:55:28] 2025-10-12 23:54:43,793 | INFO     | job 6840392430 has finished - writing final server update
[2025-10-12 19:55:28] 2025-10-12 23:54:43,793 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:55:28] 2025-10-12 23:54:43,793 | INFO     | executing command: lscpu
[2025-10-12 19:55:28] 2025-10-12 23:54:43,908 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:55:28] 2025-10-12 23:54:43,919 | INFO     | time since job start (3397s) is within the limit (172800.0s)
[2025-10-12 19:55:28] 2025-10-12 23:54:44,819 | WARNING  | process 345065 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 19:55:28] 2025-10-12 23:54:44,826 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6840392430/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:55:28] 2025-10-12 23:54:46,274 | INFO     | number of running child processes to parent process 345065: 1
[2025-10-12 19:55:28] 2025-10-12 23:54:46,274 | INFO     | maximum number of monitored processes: 6
[2025-10-12 19:55:28] 2025-10-12 23:54:46,314 | INFO     | PID=326035 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:55:28] 2025-10-12 23:54:46,315 | INFO     | .. there are 40 such processes running
[2025-10-12 19:55:28] 2025-10-12 23:54:47,316 | INFO     | time since job start (3401s) is within the limit (172800.0s)
[2025-10-12 19:55:28] 2025-10-12 23:54:48,778 | INFO     | monitor loop #233: job 0:6840392430 is in state 'finished'
[2025-10-12 19:55:28] 2025-10-12 23:54:48,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:55:28] 2025-10-12 23:54:49,323 | INFO     | time since job start (3403s) is within the limit (172800.0s)
[2025-10-12 19:55:28] 2025-10-12 23:54:51,282 | INFO     | monitor loop #234: job 0:6840392430 is in state 'finished'
[2025-10-12 19:55:28] 2025-10-12 23:54:51,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:55:28] 2025-10-12 23:54:51,329 | INFO     | time since job start (3405s) is within the limit (172800.0s)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,085 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 19:55:28] 2025-10-12 23:54:53,092 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.692890625
[2025-10-12 19:55:28] 2025-10-12 23:54:53,107 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6840392430/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,107 | INFO     | extracted standard info from prmon json
[2025-10-12 19:55:28] 2025-10-12 23:54:53,107 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:55:28] 2025-10-12 23:54:53,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:55:28] 2025-10-12 23:54:53,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:55:28] 2025-10-12 23:54:53,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | sum of square deviations: 34277852.0
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | sum of deviations: -186804356.5
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | mean x: 1760311670.5
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | mean y: 2184649.9375
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | -- intersect: 9595372952.611557
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | intersect: 9595372952.611557
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | chi2: 0.012924649202383749
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | -- intersect: 9595372952.611557
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | current memory leak: -5.45 B/s (using 48 data points, chi2=0.01)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | could have reported an average CPU frequency of 3796 MHz (5 samples)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,109 | INFO     | ..............................
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . Timing measurements:
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . get job = 0 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . initial setup = 3 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . payload setup = 9 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . stage-in = 0 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . payload execution = 3351 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . stage-out = 0 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | . log creation = 0 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,110 | INFO     | ..............................
[2025-10-12 19:55:28] 2025-10-12 23:54:53,335 | INFO     | time since job start (3407s) is within the limit (172800.0s)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,369 | INFO     | 
[2025-10-12 19:55:28] 2025-10-12 23:54:53,369 | INFO     | job summary report
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | --------------------------------------------------
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | PanDA job id: 6840392430
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | task id: 46676269
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | errors: (none)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | pilot state: finished 
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | transexitcode: 0
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | exeerrorcode: 0
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | exeerrordiag: 
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | exitcode: 0
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | exitmsg: OK
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | cpuconsumptiontime: 21432 s
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | nevents: 400
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | neventsw: 0
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | pid: 345065
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | pgrp: 345065
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | corecount: 8
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | event service: False
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | sizes: {0: 2348029, 1: 2348886, 11: 2348886, 13: 2349176, 22: 2349232, 3364: 2375122, 3365: 2384178, 3376: 2384348}
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | --------------------------------------------------
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | 
[2025-10-12 19:55:28] 2025-10-12 23:54:53,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | job 6840392430 has completed (purged errors)
[2025-10-12 19:55:28] 2025-10-12 23:54:53,395 | INFO     | overall cleanup function is called
[2025-10-12 19:55:28] 2025-10-12 23:54:54,404 | INFO     | --- collectZombieJob: --- 10, [345065]
[2025-10-12 19:55:28] 2025-10-12 23:54:54,404 | INFO     | zombie collector waiting for pid 345065
[2025-10-12 19:55:28] 2025-10-12 23:54:54,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:55:28] 2025-10-12 23:54:54,404 | INFO     | collected zombie processes
[2025-10-12 19:55:28] 2025-10-12 23:54:54,404 | INFO     | will attempt to kill all subprocesses of pid=345065
[2025-10-12 19:55:28] 2025-10-12 23:54:55,100 | INFO     | process IDs to be killed: [345065] (in reverse order)
[2025-10-12 19:55:28] 2025-10-12 23:54:55,309 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:55:28] 2025-10-12 23:54:55,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:55:28] 2025-10-12 23:54:55,339 | INFO     | did not find any defunct processes belonging to 345065
[2025-10-12 19:55:28] 2025-10-12 23:54:55,368 | INFO     | did not find any defunct processes belonging to 345065
[2025-10-12 19:55:28] 2025-10-12 23:54:55,368 | INFO     | ready for new job
[2025-10-12 19:55:28] 2025-10-12 23:54:55,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:55:28] 2025-10-12 23:54:55,369 | INFO     | ***************************************
[2025-10-12 19:55:28] 2025-10-12 23:54:55,369 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:55:28] 2025-10-12 23:54:55,369 | INFO     | ***************************************
[2025-10-12 19:55:28] 2025-10-12 23:54:55,369 | INFO     | 
[2025-10-12 19:55:28] 2025-10-12 23:54:55,374 | INFO     | architecture information:
[2025-10-12 19:55:28] 2025-10-12 23:54:55,374 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:55:28] 2025-10-12 23:54:55,418 | INFO     | cat /etc/os-release:
[2025-10-12 19:55:28] NAME="CentOS Linux"
[2025-10-12 19:55:28] VERSION="7 (Core)"
[2025-10-12 19:55:28] ID="centos"
[2025-10-12 19:55:28] ID_LIKE="rhel fedora"
[2025-10-12 19:55:28] VERSION_ID="7"
[2025-10-12 19:55:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:55:28] ANSI_COLOR="0;31"
[2025-10-12 19:55:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:55:28] HOME_URL="https://www.centos.org/"
[2025-10-12 19:55:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:55:28] 
[2025-10-12 19:55:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:55:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:55:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:55:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:55:28] 
[2025-10-12 19:55:28] 2025-10-12 23:54:55,418 | INFO     | ***************************************
[2025-10-12 19:55:28] 2025-10-12 23:54:55,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-10-12 19:55:28] 2025-10-12 23:54:55,948 | INFO     | sufficient remaining disk space (165756796928 B)
[2025-10-12 19:55:28] 2025-10-12 23:54:55,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:55:28] 2025-10-12 23:54:55,949 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:55:28] 2025-10-12 23:54:55,949 | INFO     | update_server=False
[2025-10-12 19:55:28] 2025-10-12 23:54:55,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:55:28] 2025-10-12 23:54:56,122 | INFO     | all data control threads have been joined
[2025-10-12 19:55:28] 2025-10-12 23:54:56,319 | INFO     | all payload control threads have been joined
[2025-10-12 19:55:28] 2025-10-12 23:54:56,328 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:55:28] 2025-10-12 23:54:56,328 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:55:28] 2025-10-12 23:54:56,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:55:28] 2025-10-12 23:54:56,328 | INFO     | will abort loop
[2025-10-12 19:55:28] 2025-10-12 23:54:56,955 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:56,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:55:28] 2025-10-12 23:54:57,027 | INFO     | all job control threads have been joined
[2025-10-12 19:55:28] 2025-10-12 23:54:57,128 | INFO     | [data] control thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:57,325 | INFO     | [payload] control thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:57,328 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:57,334 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:57,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:55:28] 2025-10-12 23:54:57,490 | INFO     | [job] validate thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:57,701 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:57,856 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:58,035 | INFO     | [job] control thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:58,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:55:28] 2025-10-12 23:54:58,280 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:58,403 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:58,540 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:59,211 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:54:59,376 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:55:00,989 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:55:06,297 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:55:28] 2025-10-12 23:55:07,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:55:28] 2025-10-12 23:55:11,515 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:55:28] 2025-10-12 23:55:12,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027835426624)>', '<ExcThread(monitor, started 140027562530560)>']
[2025-10-12 19:55:28] 2025-10-12 23:55:17,727 | INFO     | all workflow threads have been joined
[2025-10-12 19:55:28] 2025-10-12 23:55:17,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:55:28] 2025-10-12 23:55:17,727 | INFO     | traces error code: 0
[2025-10-12 19:55:28] 2025-10-12 23:55:17,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:55:28] 2025-10-12 23:55:27,613 | INFO     | PID=326035 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 19:55:28] 2025-10-12 23:55:27,613 | INFO     | .. there are 39 such processes running
[2025-10-12 19:55:28] 2025-10-12 23:55:27,614 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:55:28] 2025-10-12 23:55:27,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:55:28] 2025-10-12 23:55:27,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:55:28] 2025-10-12 23:55:27,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:55:28] 2025-10-12 23:55:27,615 | INFO     | [monitor] control thread has ended
[2025-10-12 19:55:28] 2025-10-12 23:55:27,789 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:55:28] 2025-10-12 23:55:27,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:55:28] 2025-10-12 23:55:27,808 [wrapper] pilotpid: 326035
[2025-10-12 19:55:28] 2025-10-12 23:55:27,812 [wrapper] Pilot exit status: 0
[2025-10-12 19:55:28] 2025-10-12 23:55:27,838 [wrapper] pandaids: 6840392430
[2025-10-12 19:55:28] 2025-10-12 23:55:28,064 [wrapper] cleanup supervisor_pilot  760785 326036
[2025-10-12 19:55:28] 2025-10-12 23:55:28,081 [wrapper] Test setup, not cleaning
[2025-10-12 19:55:28] 2025-10-12 23:55:28,091 [wrapper] apfmon messages muted
[2025-10-12 19:55:28] 2025-10-12 23:55:28,117 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:55:28] 2025-10-12 23:55:28,140 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:55:28]  *** Error codes and diagnostics ***
[2025-10-12 19:55:28]     "exeErrorCode": 0,
[2025-10-12 19:55:28]     "exeErrorDiag": "",
[2025-10-12 19:55:28]     "pilotErrorCode": 0,
[2025-10-12 19:55:28]     "pilotErrorDiag": "",
[2025-10-12 19:55:28]  *** Listing of results directory ***
[2025-10-12 19:55:28] total 412396
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:47 queuedata.json
[2025-10-12 19:55:28] -rwx------. 1 boincer umatlas     36292 Oct 12 12:47 runpilot2-wrapper.sh
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:55:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:57 run_atlas
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:57 job.xml
[2025-10-12 19:55:28] -rw-r--r--. 2 boincer umatlas 221060547 Oct 12 18:57 EVNT.46676267._004783.pool.root.1
[2025-10-12 19:55:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:57 start_atlas.sh
[2025-10-12 19:55:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:57 shared
[2025-10-12 19:55:28] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 18:57 input.tar.gz
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:57 boinc_lockfile
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:57 pandaJob.out
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas    975603 Oct 12 18:58 agis_schedconf.cvmfs.json
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:55:28] drwx------. 5 boincer umatlas      4096 Oct 12 18:58 pilot3
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas      7162 Oct 12 19:48 init_data.xml
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas 195748354 Oct 12 19:54 HITS.46676269._083891.pool.root.1
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas       529 Oct 12 19:54 boinc_task_state.xml
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas      1034 Oct 12 19:54 memory_monitor_summary.json
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas    297199 Oct 12 19:54 log.46676269._083891.job.log.tgz.1
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas      7772 Oct 12 19:54 heartbeat.json
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas        27 Oct 12 19:55 wrapper_checkpoint.txt
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas        95 Oct 12 19:55 pilot_heartbeat.json
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas       822 Oct 12 19:55 pilotlog.txt
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:55 boinc_mmap_file
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas    494447 Oct 12 19:55 log.46676269._083891.job.log.1
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas       357 Oct 12 19:55 output.list
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:55 runtime_log
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas    808960 Oct 12 19:55 result.tar.gz
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas      8712 Oct 12 19:55 runtime_log.err
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas       651 Oct 12 19:55 CzLNDmLPES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIikNDmrVWHan.diag
[2025-10-12 19:55:28] -rw-r--r--. 1 boincer umatlas     22496 Oct 12 19:55 stderr.txt
[2025-10-12 19:55:28] HITS file was successfully produced:
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas 195748354 Oct 12 19:54 shared/HITS.pool.root.1
[2025-10-12 19:55:28]  *** Contents of shared directory: ***
[2025-10-12 19:55:28] total 408420
[2025-10-12 19:55:28] -rw-r--r--. 2 boincer umatlas 221060547 Oct 12 18:57 ATLAS.root_0
[2025-10-12 19:55:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:57 start_atlas.sh
[2025-10-12 19:55:28] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 18:57 input.tar.gz
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas 195748354 Oct 12 19:54 HITS.pool.root.1
[2025-10-12 19:55:28] -rw-------. 1 boincer umatlas    808960 Oct 12 19:55 result.tar.gz
19:55:29 (314818): run_atlas exited; CPU time 21558.732898
19:55:29 (314818): called boinc_finish(0)

</stderr_txt>
]]>

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