Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:17 (6707): wrapper (7.7.26015): starting
10:07:17 (6707): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 10:07:17] Arguments: --nthreads 8
[2025-10-13 10:07:17] Threads: 8
[2025-10-13 10:07:17] Checking for CVMFS
[2025-10-13 10:07:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:07:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:07:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:07:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:07:18] 2.11.2.0 3063 221605 144404 151653 2 211 12920508 25165824 4100 130560 0 119666850 99.871 67893881 3232 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 10:07:18] CVMFS is ok
[2025-10-13 10:07:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:07:18] Checking for apptainer binary...
[2025-10-13 10:07:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:07:18] Running /usr/bin/apptainer --version
[2025-10-13 10:07:18] apptainer version 1.3.2-1.el7
[2025-10-13 10:07:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:07:19] cg-vwn462.simple-grid.lan
[2025-10-13 10:07:19] apptainer works
[2025-10-13 10:07:19] Set ATHENA_PROC_NUMBER=8
[2025-10-13 10:07:19] Set ATHENA_CORE_NUMBER=8
[2025-10-13 10:07:19] Starting ATLAS job with PandaID=6840538158
[2025-10-13 10:07:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:41:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:41:09] 2025-10-13 11:39:53,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:41:09] 2025-10-13 11:39:53,722 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:41:09] 2025-10-13 11:39:53,723 | INFO     | sum of square deviations: 2750295288.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,725 | INFO     | sum of deviations: 18884993782.000004
[2025-10-13 13:41:09] 2025-10-13 11:39:53,725 | INFO     | mean x: 1760349186.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,725 | INFO     | mean y: 2462803.2995169084
[2025-10-13 13:41:09] 2025-10-13 11:39:53,725 | INFO     | -- intersect: -12085033247.327745
[2025-10-13 13:41:09] 2025-10-13 11:39:53,725 | INFO     | intersect: -12085033247.327745
[2025-10-13 13:41:09] 2025-10-13 11:39:53,725 | INFO     | chi2: 2.213180260896151
[2025-10-13 13:41:09] 2025-10-13 11:39:53,726 | INFO     | sum of square deviations: 2555770710.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,727 | INFO     | sum of deviations: 31899393009.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,727 | INFO     | mean x: 1760349033.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,727 | INFO     | mean y: 2472796.079207921
[2025-10-13 13:41:09] 2025-10-13 11:39:53,727 | INFO     | -- intersect: -21969007439.580925
[2025-10-13 13:41:09] 2025-10-13 11:39:53,728 | INFO     | intersect: -21969007439.580925
[2025-10-13 13:41:09] 2025-10-13 11:39:53,728 | INFO     | chi2: 1.4369151856998434
[2025-10-13 13:41:09] 2025-10-13 11:39:53,728 | INFO     | current chi2=1.4369151856998434 (change=35.074642988275414 %)
[2025-10-13 13:41:09] 2025-10-13 11:39:53,728 | INFO     | sum of square deviations: 2370641658.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,730 | INFO     | sum of deviations: 30992428051.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,730 | INFO     | mean x: 1760348881.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,730 | INFO     | mean y: 2472048.8223350253
[2025-10-13 13:41:09] 2025-10-13 11:39:53,730 | INFO     | -- intersect: -23011333456.088295
[2025-10-13 13:41:09] 2025-10-13 11:39:53,730 | INFO     | intersect: -23011333456.088295
[2025-10-13 13:41:09] 2025-10-13 11:39:53,730 | INFO     | chi2: 1.4376678641384353
[2025-10-13 13:41:09] 2025-10-13 11:39:53,731 | INFO     | current chi2=1.4376678641384353 (change=-0.05238154945277771 %)
[2025-10-13 13:41:09] 2025-10-13 11:39:53,731 | INFO     | right removable region: 196
[2025-10-13 13:41:09] 2025-10-13 11:39:53,731 | INFO     | sum of square deviations: 2555770710.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,732 | INFO     | sum of deviations: -10803585834.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,733 | INFO     | mean x: 1760349338.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,733 | INFO     | mean y: 2485800.292079208
[2025-10-13 13:41:09] 2025-10-13 11:39:53,733 | INFO     | -- intersect: 7443718732.126339
[2025-10-13 13:41:09] 2025-10-13 11:39:53,733 | INFO     | intersect: 7443718732.126339
[2025-10-13 13:41:09] 2025-10-13 11:39:53,733 | INFO     | chi2: 0.8315627336122038
[2025-10-13 13:41:09] 2025-10-13 11:39:53,733 | INFO     | current chi2=0.8315627336122038 (change=62.42679603172083 %)
[2025-10-13 13:41:09] 2025-10-13 11:39:53,734 | INFO     | sum of square deviations: 2370641658.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,735 | INFO     | sum of deviations: -5853515592.000004
[2025-10-13 13:41:09] 2025-10-13 11:39:53,735 | INFO     | mean x: 1760349491.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,735 | INFO     | mean y: 2481689.162436548
[2025-10-13 13:41:09] 2025-10-13 11:39:53,735 | INFO     | -- intersect: 4349082601.267799
[2025-10-13 13:41:09] 2025-10-13 11:39:53,735 | INFO     | intersect: 4349082601.267799
[2025-10-13 13:41:09] 2025-10-13 11:39:53,736 | INFO     | chi2: 0.7998960810916159
[2025-10-13 13:41:09] 2025-10-13 11:39:53,736 | INFO     | current chi2=0.7998960810916159 (change=3.8080894249591872 %)
[2025-10-13 13:41:09] 2025-10-13 11:39:53,736 | INFO     | left removable region: 20
[2025-10-13 13:41:09] 2025-10-13 11:39:53,736 | INFO     | sum of square deviations: 1690450300.0
[2025-10-13 13:41:09] 2025-10-13 11:39:53,737 | INFO     | sum of deviations: 4167576333.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | mean x: 1760349460.5
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | mean y: 2494987.335227273
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | -- intersect: -4337408262.271871
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | intersect: -4337408262.271871
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | chi2: 0.0009082976039905226
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | -- intersect: -4337408262.271871
[2025-10-13 13:41:09] 2025-10-13 11:39:53,738 | INFO     | current memory leak: 2.47 B/s (using 176 data points, chi2=0.00)
[2025-10-13 13:41:09] 2025-10-13 11:39:53,739 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2025-10-13 13:41:09] 2025-10-13 11:39:53,739 | INFO     | ..............................
[2025-10-13 13:41:09] 2025-10-13 11:39:53,739 | INFO     | . Timing measurements:
[2025-10-13 13:41:09] 2025-10-13 11:39:53,739 | INFO     | . get job = 0 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,739 | INFO     | . initial setup = 2 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,740 | INFO     | . payload setup = 9 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,740 | INFO     | . stage-in = 0 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,740 | INFO     | . payload execution = 12606 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,740 | INFO     | . stage-out = 4 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,740 | INFO     | . log creation = 1 s
[2025-10-13 13:41:09] 2025-10-13 11:39:53,740 | INFO     | ..............................
[2025-10-13 13:41:09] 2025-10-13 11:39:54,058 | INFO     | time since job start (12738s) is within the limit (172800.0s)
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | 
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | job summary report
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | --------------------------------------------------
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | PanDA job id: 6840538158
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | task id: 46676269
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | errors: (none)
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | pilot state: finished 
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | transexitcode: 0
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | exeerrorcode: 0
[2025-10-13 13:41:09] 2025-10-13 11:39:54,377 | INFO     | exeerrordiag: 
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | exitcode: 0
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | exitmsg: OK
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | cpuconsumptiontime: 48568 s
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | nevents: 400
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | neventsw: 0
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | pid: 17012
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | pgrp: 17012
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | corecount: 8
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | event service: False
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | sizes: {0: 2348684, 1: 2348883, 7: 2349145, 12: 2349173, 12620: 2378629, 12625: 2387813, 12718: 2387951}
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | --------------------------------------------------
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | 
[2025-10-13 13:41:09] 2025-10-13 11:39:54,378 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-10-13 13:41:09] 2025-10-13 11:39:54,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,801 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:41:09] 2025-10-13 11:39:54,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:41:09] 2025-10-13 11:39:54,801 | INFO     | job 6840538158 has completed (purged errors)
[2025-10-13 13:41:09] 2025-10-13 11:39:54,801 | INFO     | overall cleanup function is called
[2025-10-13 13:41:09] 2025-10-13 11:39:55,810 | INFO     | --- collectZombieJob: --- 10, [17012]
[2025-10-13 13:41:09] 2025-10-13 11:39:55,810 | INFO     | zombie collector waiting for pid 17012
[2025-10-13 13:41:09] 2025-10-13 11:39:55,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:41:09] 2025-10-13 11:39:55,810 | INFO     | collected zombie processes
[2025-10-13 13:41:09] 2025-10-13 11:39:55,810 | INFO     | will attempt to kill all subprocesses of pid=17012
[2025-10-13 13:41:09] 2025-10-13 11:39:55,915 | INFO     | process IDs to be killed: [17012] (in reverse order)
[2025-10-13 13:41:09] 2025-10-13 11:39:57,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:41:09] 2025-10-13 11:39:57,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:41:09] 2025-10-13 11:39:57,193 | INFO     | did not find any defunct processes belonging to 17012
[2025-10-13 13:41:09] 2025-10-13 11:39:57,195 | INFO     | did not find any defunct processes belonging to 17012
[2025-10-13 13:41:09] 2025-10-13 11:39:57,196 | INFO     | ready for new job
[2025-10-13 13:41:09] 2025-10-13 11:39:57,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:41:09] 2025-10-13 11:39:57,197 | INFO     | ***************************************
[2025-10-13 13:41:09] 2025-10-13 11:39:57,198 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:41:09] 2025-10-13 11:39:57,198 | INFO     | ***************************************
[2025-10-13 13:41:09] 2025-10-13 11:39:57,198 | INFO     | 
[2025-10-13 13:41:09] 2025-10-13 11:39:57,198 | INFO     | pilot is running in a VM
[2025-10-13 13:41:09] 2025-10-13 11:39:57,198 | INFO     | architecture information:
[2025-10-13 13:41:09] 2025-10-13 11:39:57,211 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:41:09] 2025-10-13 11:39:57,443 | INFO     | cat /etc/os-release:
[2025-10-13 13:41:09] NAME="CentOS Linux"
[2025-10-13 13:41:09] VERSION="7 (Core)"
[2025-10-13 13:41:09] ID="centos"
[2025-10-13 13:41:09] ID_LIKE="rhel fedora"
[2025-10-13 13:41:09] VERSION_ID="7"
[2025-10-13 13:41:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:41:09] ANSI_COLOR="0;31"
[2025-10-13 13:41:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:41:09] HOME_URL="https://www.centos.org/"
[2025-10-13 13:41:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:41:09] 
[2025-10-13 13:41:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:41:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:41:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:41:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:41:09] 
[2025-10-13 13:41:09] 2025-10-13 11:39:57,443 | INFO     | ***************************************
[2025-10-13 13:41:09] 2025-10-13 11:39:57,948 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-10-13 13:41:09] 2025-10-13 11:39:58,181 | INFO     | sufficient remaining disk space (495944990720 B)
[2025-10-13 13:41:09] 2025-10-13 11:39:58,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:41:09] 2025-10-13 11:39:58,182 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:41:09] 2025-10-13 11:39:58,182 | INFO     | update_server=False
[2025-10-13 13:41:09] 2025-10-13 11:39:58,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:41:09] 2025-10-13 11:39:58,349 | INFO     | all payload control threads have been joined
[2025-10-13 13:41:09] 2025-10-13 11:39:58,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:41:09] 2025-10-13 11:39:58,414 | INFO     | aborting loop
[2025-10-13 13:41:09] 2025-10-13 11:39:58,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:41:09] 2025-10-13 11:39:58,845 | INFO     | all data control threads have been joined
[2025-10-13 13:41:09] 2025-10-13 11:39:58,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:41:09] 2025-10-13 11:39:59,188 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:39:59,355 | INFO     | [payload] control thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:39:59,420 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:39:59,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:39:59,637 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:39:59,664 | INFO     | all job control threads have been joined
[2025-10-13 13:41:09] 2025-10-13 11:39:59,851 | INFO     | [data] control thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:39:59,921 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,089 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,335 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,360 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,399 | INFO     | [job] validate thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,662 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,662 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,670 | INFO     | [job] control thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:00,771 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:01,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:41:09] 2025-10-13 11:40:05,368 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:41:09] 2025-10-13 11:40:27,236 | INFO     | PID=10534 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 13:41:09] 2025-10-13 11:40:27,236 | INFO     | .. there are 9 such processes running
[2025-10-13 13:41:09] 2025-10-13 11:40:27,236 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:41:09] 2025-10-13 11:40:27,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:41:09] 2025-10-13 11:40:27,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:41:09] 2025-10-13 11:40:57,965 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:41:09] 2025-10-13 11:40:59,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423763744576)>', '<ExcThread(monitor, started 140423343367936)>']
[2025-10-13 13:41:09] 2025-10-13 11:41:00,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:41:09] 2025-10-13 11:41:00,440 | INFO     | [monitor] control thread has ended
[2025-10-13 13:41:09] 2025-10-13 11:41:04,516 | INFO     | all workflow threads have been joined
[2025-10-13 13:41:09] 2025-10-13 11:41:04,516 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:41:09] 2025-10-13 11:41:04,516 | INFO     | traces error code: 0
[2025-10-13 13:41:09] 2025-10-13 11:41:04,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:41:09] 2025-10-13 11:41:04,886 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:41:09] 2025-10-13 11:41:04,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:41:09] 2025-10-13 11:41:05,036 [wrapper] pilotpid: 10534
[2025-10-13 13:41:09] 2025-10-13 11:41:05,100 [wrapper] Pilot exit status: 0
[2025-10-13 13:41:09] 2025-10-13 11:41:05,621 [wrapper] pandaids: 6840538158
[2025-10-13 13:41:09] 2025-10-13 11:41:06,841 [wrapper] cleanup supervisor_pilot 23791 10535
[2025-10-13 13:41:09] 2025-10-13 11:41:06,918 [wrapper] Test setup, not cleaning
[2025-10-13 13:41:09] 2025-10-13 11:41:06,995 [wrapper] apfmon messages muted
[2025-10-13 13:41:09] 2025-10-13 11:41:07,051 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:41:09] 2025-10-13 11:41:07,155 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:41:09]  *** Error codes and diagnostics ***
[2025-10-13 13:41:09]     "exeErrorCode": 0,
[2025-10-13 13:41:09]     "exeErrorDiag": "",
[2025-10-13 13:41:09]     "pilotErrorCode": 0,
[2025-10-13 13:41:09]     "pilotErrorDiag": "",
[2025-10-13 13:41:09]  *** Listing of results directory ***
[2025-10-13 13:41:09] total 406588
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc    557409 Oct 12 20:53 pilot3.tar.gz
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc      5112 Oct 12 21:06 queuedata.json
[2025-10-13 13:41:09] -rwx------. 1 boinc boinc     36292 Oct 12 21:06 runpilot2-wrapper.sh
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc       100 Oct 13 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:41:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 10:07 run_atlas
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc       105 Oct 13 10:07 job.xml
[2025-10-13 13:41:09] -rw-r--r--. 2 boinc boinc 218471878 Oct 13 10:07 EVNT.46676267._004441.pool.root.1
[2025-10-13 13:41:09] -rw-r--r--. 2 boinc boinc    569676 Oct 13 10:07 input.tar.gz
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc      6391 Oct 13 10:07 init_data.xml
[2025-10-13 13:41:09] -rw-r--r--. 2 boinc boinc     15120 Oct 13 10:07 start_atlas.sh
[2025-10-13 13:41:09] drwxrwx--x. 2 boinc boinc        68 Oct 13 10:07 shared
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc         0 Oct 13 10:07 boinc_lockfile
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc      2548 Oct 13 10:07 pandaJob.out
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc    972849 Oct 13 10:07 agis_schedconf.cvmfs.json
[2025-10-13 13:41:09] drwx------. 5 boinc boinc      4096 Oct 13 10:07 pilot3
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc 189684389 Oct 13 13:36 HITS.46676269._087030.pool.root.1
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc       530 Oct 13 13:37 boinc_task_state.xml
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc      1021 Oct 13 13:38 memory_monitor_summary.json
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc   1560580 Oct 13 13:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc    423233 Oct 13 13:38 log.46676269._087030.job.log.tgz.1
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc        95 Oct 13 13:39 pilot_heartbeat.json
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc      7776 Oct 13 13:39 heartbeat.json
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc      8192 Oct 13 13:40 boinc_mmap_file
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc        28 Oct 13 13:40 wrapper_checkpoint.txt
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc      4885 Oct 13 13:41 pilotlog.txt
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc   1731791 Oct 13 13:41 log.46676269._087030.job.log.1
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc       357 Oct 13 13:41 output.list
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc       620 Oct 13 13:41 runtime_log
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc   2170880 Oct 13 13:41 result.tar.gz
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc      8717 Oct 13 13:41 runtime_log.err
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc       656 Oct 13 13:41 ljMKDmPaGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUkUMDmW3uwim.diag
[2025-10-13 13:41:09] -rw-r--r--. 1 boinc boinc     20571 Oct 13 13:41 stderr.txt
[2025-10-13 13:41:09] HITS file was successfully produced:
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc 189684389 Oct 13 13:36 shared/HITS.pool.root.1
[2025-10-13 13:41:09]  *** Contents of shared directory: ***
[2025-10-13 13:41:09] total 401288
[2025-10-13 13:41:09] -rw-r--r--. 2 boinc boinc 218471878 Oct 13 10:07 ATLAS.root_0
[2025-10-13 13:41:09] -rw-r--r--. 2 boinc boinc    569676 Oct 13 10:07 input.tar.gz
[2025-10-13 13:41:09] -rw-r--r--. 2 boinc boinc     15120 Oct 13 10:07 start_atlas.sh
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc 189684389 Oct 13 13:36 HITS.pool.root.1
[2025-10-13 13:41:09] -rw-------. 1 boinc boinc   2170880 Oct 13 13:41 result.tar.gz
13:41:11 (6707): run_atlas exited; CPU time 48709.799602
13:41:11 (6707): called boinc_finish(0)

</stderr_txt>
]]>

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