Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:12:40 (1627068): wrapper (7.7.26015): starting
09:12:40 (1627068): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:12:40] Arguments: --nthreads 3
[2025-10-13 09:12:40] Threads: 3
[2025-10-13 09:12:40] Checking for CVMFS
[2025-10-13 09:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:12:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:12:40] 2.9.2.0 4017482 5351 74136 151652 2 57 28547872 36864001 0 130560 0 3990952 99.990 183782 771 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:12:40] CVMFS is ok
[2025-10-13 09:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:12:40] Further information can be found at the LHC@home message board.
[2025-10-13 09:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:12:40] Checking for apptainer binary...
[2025-10-13 09:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:12:40] Running /usr/bin/apptainer --version
[2025-10-13 09:12:40] apptainer version 1.4.1-1.1
[2025-10-13 09:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:12:40] cosA133
[2025-10-13 09:12:40] apptainer works
[2025-10-13 09:12:40] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:12:40] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:12:40] Starting ATLAS job with PandaID=6840538132
[2025-10-13 09:12:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:46:21]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:46:21]  status_code=0
[2025-10-13 10:46:21]  storage_token=
[2025-10-13 10:46:21]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840538132/log.46676269._087004.job.log.tgz.1
[2025-10-13 10:46:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/8b/log.46676269._087004.job.log.tgz.1
[2025-10-13 10:46:21]  workdir=None
[2025-10-13 10:46:21] ]
[2025-10-13 10:46:21] 2025-10-13 08:45:41,576 | INFO     | transferring file log.46676269._087004.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840538132/log.46676269._087004.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 10:46:21] 2025-10-13 08:45:41,576 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840538132/log.46676269._087004.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0870
[2025-10-13 10:46:21] 2025-10-13 08:45:41,589 | INFO     | adding to output.list: log.46676269._087004.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/8b/log.46676269._087004.job.log.tg
[2025-10-13 10:46:21] 2025-10-13 08:45:41,589 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:46:21] 2025-10-13 08:45:41,589 | INFO     | summary of transferred files:
[2025-10-13 10:46:21] 2025-10-13 08:45:41,589 | INFO     |  -- lfn=log.46676269._087004.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:46:21] 2025-10-13 08:45:41,589 | INFO     | stage-out finished correctly
[2025-10-13 10:46:21] 2025-10-13 08:45:41,620 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:46:21] 2025-10-13 08:45:41,999 | INFO     | monitor loop #428: job 0:6840538132 is in state 'finished'
[2025-10-13 10:46:21] 2025-10-13 08:45:41,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:46:21] 2025-10-13 08:45:42,308 | INFO     | time since job start (5569s) is within the limit (172800.0s)
[2025-10-13 10:46:21] 2025-10-13 08:45:43,102 | INFO     | job 6840538132 has state=finished
[2025-10-13 10:46:21] 2025-10-13 08:45:43,103 | INFO     | preparing for final server update for job 6840538132 in state='finished'
[2025-10-13 10:46:21] 2025-10-13 08:45:43,104 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:46:21] 2025-10-13 08:45:43,104 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:46:21] 2025-10-13 08:45:43,104 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:46:21] 2025-10-13 08:45:43,104 | INFO     | job 6840538132 has finished - writing final server update
[2025-10-13 10:46:21] 2025-10-13 08:45:43,105 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:46:21] 2025-10-13 08:45:43,106 | INFO     | executing command: lscpu
[2025-10-13 10:46:21] 2025-10-13 08:45:43,123 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:46:21] 2025-10-13 08:45:44,316 | INFO     | time since job start (5571s) is within the limit (172800.0s)
[2025-10-13 10:46:21] 2025-10-13 08:45:44,503 | INFO     | monitor loop #429: job 0:6840538132 is in state 'finished'
[2025-10-13 10:46:21] 2025-10-13 08:45:44,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:46:21] 2025-10-13 08:45:46,322 | INFO     | time since job start (5573s) is within the limit (172800.0s)
[2025-10-13 10:46:21] 2025-10-13 08:45:47,007 | INFO     | monitor loop #430: job 0:6840538132 is in state 'finished'
[2025-10-13 10:46:21] 2025-10-13 08:45:47,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:46:21] 2025-10-13 08:45:48,329 | INFO     | time since job start (5575s) is within the limit (172800.0s)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,460 | INFO     | PID=1630804 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:46:21] 2025-10-13 08:45:49,511 | INFO     | monitor loop #431: job 0:6840538132 is in state 'finished'
[2025-10-13 10:46:21] 2025-10-13 08:45:49,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,571 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:46:21] 2025-10-13 08:45:49,572 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4290.678583333333
[2025-10-13 10:46:21] 2025-10-13 08:45:49,573 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840538132/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,573 | INFO     | extracted standard info from prmon json
[2025-10-13 10:46:21] 2025-10-13 08:45:49,573 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:46:21] 2025-10-13 08:45:49,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:46:21] 2025-10-13 08:45:49,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:46:21] 2025-10-13 08:45:49,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:46:21] 2025-10-13 08:45:49,574 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:46:21] 2025-10-13 08:45:49,574 | INFO     | sum of square deviations: 183761585.0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | sum of deviations: -6670737777.0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | mean x: 1760342438.5
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | mean y: 2440329.214285714
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | -- intersect: 63904712422.471695
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | intersect: 63904712422.471695
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | chi2: 0.030313062878584
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | -- intersect: 63904712422.471695
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | current memory leak: -36.30 B/s (using 84 data points, chi2=0.03)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | could have reported an average CPU frequency of 4315 MHz (7 samples)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | ..............................
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . Timing measurements:
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . get job = 0 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . initial setup = 1 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . payload setup = 7 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . stage-in = 0 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . payload execution = 5539 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . stage-out = 0 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | . log creation = 0 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,575 | INFO     | ..............................
[2025-10-13 10:46:21] 2025-10-13 08:45:49,606 | INFO     | 
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | job summary report
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | --------------------------------------------------
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | PanDA job id: 6840538132
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | task id: 46676269
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | errors: (none)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | pilot state: finished 
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | transexitcode: 0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | exeerrorcode: 0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | exeerrordiag: 
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | exitcode: 0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | exitmsg: OK
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | cpuconsumptiontime: 16009 s
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | nevents: 400
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | neventsw: 0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | pid: 1637272
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | pgrp: 1637272
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | corecount: 3
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | event service: False
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | sizes: {0: 2348857, 6: 2349119, 10: 2349147, 5550: 2384881, 5558: 2385019}
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | --------------------------------------------------
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | 
[2025-10-13 10:46:21] 2025-10-13 08:45:49,607 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:46:21] 2025-10-13 08:45:49,620 | INFO     | job 6840538132 has completed (purged errors)
[2025-10-13 10:46:21] 2025-10-13 08:45:49,621 | INFO     | overall cleanup function is called
[2025-10-13 10:46:21] 2025-10-13 08:45:50,627 | INFO     | --- collectZombieJob: --- 10, [1637272]
[2025-10-13 10:46:21] 2025-10-13 08:45:50,627 | INFO     | zombie collector waiting for pid 1637272
[2025-10-13 10:46:21] 2025-10-13 08:45:50,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:46:21] 2025-10-13 08:45:50,628 | INFO     | collected zombie processes
[2025-10-13 10:46:21] 2025-10-13 08:45:50,628 | INFO     | will attempt to kill all subprocesses of pid=1637272
[2025-10-13 10:46:21] 2025-10-13 08:45:50,684 | INFO     | process IDs to be killed: [1637272] (in reverse order)
[2025-10-13 10:46:21] 2025-10-13 08:45:50,714 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:46:21] 2025-10-13 08:45:50,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:46:21] 2025-10-13 08:45:50,721 | INFO     | did not find any defunct processes belonging to 1637272
[2025-10-13 10:46:21] 2025-10-13 08:45:50,727 | INFO     | did not find any defunct processes belonging to 1637272
[2025-10-13 10:46:21] 2025-10-13 08:45:50,727 | INFO     | ready for new job
[2025-10-13 10:46:21] 2025-10-13 08:45:50,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:46:21] 2025-10-13 08:45:50,730 | INFO     | ***************************************
[2025-10-13 10:46:21] 2025-10-13 08:45:50,731 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:46:21] 2025-10-13 08:45:50,731 | INFO     | ***************************************
[2025-10-13 10:46:21] 2025-10-13 08:45:50,731 | INFO     | 
[2025-10-13 10:46:21] 2025-10-13 08:45:50,733 | INFO     | architecture information:
[2025-10-13 10:46:21] 2025-10-13 08:45:50,733 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:46:21] 2025-10-13 08:45:50,754 | INFO     | cat /etc/os-release:
[2025-10-13 10:46:21] NAME="CentOS Linux"
[2025-10-13 10:46:21] VERSION="7 (Core)"
[2025-10-13 10:46:21] ID="centos"
[2025-10-13 10:46:21] ID_LIKE="rhel fedora"
[2025-10-13 10:46:21] VERSION_ID="7"
[2025-10-13 10:46:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:46:21] ANSI_COLOR="0;31"
[2025-10-13 10:46:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:46:21] HOME_URL="https://www.centos.org/"
[2025-10-13 10:46:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:46:21] 
[2025-10-13 10:46:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:46:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:46:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:46:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:46:21] 
[2025-10-13 10:46:21] 2025-10-13 08:45:50,754 | INFO     | ***************************************
[2025-10-13 10:46:21] 2025-10-13 08:45:51,257 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 10:46:21] 2025-10-13 08:45:51,271 | INFO     | sufficient remaining disk space (632684544000 B)
[2025-10-13 10:46:21] 2025-10-13 08:45:51,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:46:21] 2025-10-13 08:45:51,272 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:46:21] 2025-10-13 08:45:51,272 | INFO     | update_server=False
[2025-10-13 10:46:21] 2025-10-13 08:45:51,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:46:21] 2025-10-13 08:45:51,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:46:21] 2025-10-13 08:45:51,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:46:21] 2025-10-13 08:45:51,272 | INFO     | aborting loop
[2025-10-13 10:46:21] 2025-10-13 08:45:51,844 | INFO     | all data control threads have been joined
[2025-10-13 10:46:21] 2025-10-13 08:45:51,939 | INFO     | all job control threads have been joined
[2025-10-13 10:46:21] 2025-10-13 08:45:52,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:46:21] 2025-10-13 08:45:52,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:46:21] 2025-10-13 08:45:52,277 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:52,278 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:52,279 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:52,447 | INFO     | all payload control threads have been joined
[2025-10-13 10:46:21] 2025-10-13 08:45:52,797 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:52,849 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:52,850 | INFO     | [data] control thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:52,945 | INFO     | [job] control thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:53,322 | INFO     | [job] validate thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:53,453 | INFO     | [payload] control thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:53,527 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:53,603 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:53,604 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:53,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:54,141 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:45:56,167 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:46:01,337 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:46:21] 2025-10-13 08:46:02,298 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:46:21] 2025-10-13 08:46:03,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:46:21] 2025-10-13 08:46:05,228 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716964341568)>', '<ExcThread(monitor, started 140716323882752)>']
[2025-10-13 10:46:21] 2025-10-13 08:46:10,252 | INFO     | all workflow threads have been joined
[2025-10-13 10:46:21] 2025-10-13 08:46:10,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:46:21] 2025-10-13 08:46:10,253 | INFO     | traces error code: 0
[2025-10-13 10:46:21] 2025-10-13 08:46:10,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:46:21] 2025-10-13 08:46:21,561 | INFO     | PID=1630804 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:46:21] 2025-10-13 08:46:21,561 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:46:21] 2025-10-13 08:46:21,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:46:21] 2025-10-13 08:46:21,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:46:21] 2025-10-13 08:46:21,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:46:21] 2025-10-13 08:46:21,561 | INFO     | [monitor] control thread has ended
[2025-10-13 10:46:21] 2025-10-13 08:46:21,607 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:46:21] 2025-10-13 08:46:21,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:46:21] 2025-10-13 08:46:21,613 [wrapper] pilotpid: 1630804
[2025-10-13 10:46:21] 2025-10-13 08:46:21,616 [wrapper] Pilot exit status: 0
[2025-10-13 10:46:21] 2025-10-13 08:46:21,623 [wrapper] pandaids: 6840538132
[2025-10-13 10:46:21] 2025-10-13 08:46:21,641 [wrapper] cleanup supervisor_pilot 1652600 1630805
[2025-10-13 10:46:21] 2025-10-13 08:46:21,644 [wrapper] Test setup, not cleaning
[2025-10-13 10:46:21] 2025-10-13 08:46:21,647 [wrapper] apfmon messages muted
[2025-10-13 10:46:21] 2025-10-13 08:46:21,650 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:46:21] 2025-10-13 08:46:21,652 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:46:21]  *** Error codes and diagnostics ***
[2025-10-13 10:46:21]     "exeErrorCode": 0,
[2025-10-13 10:46:21]     "exeErrorDiag": "",
[2025-10-13 10:46:21]     "pilotErrorCode": 0,
[2025-10-13 10:46:21]     "pilotErrorDiag": "",
[2025-10-13 10:46:21]  *** Listing of results directory ***
[2025-10-13 10:46:21] total 414128
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:53 pilot3.tar.gz
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:06 queuedata.json
[2025-10-13 10:46:21] -rwx------ 1 boinc boinc     36292 Oct 12 21:07 runpilot2-wrapper.sh
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:46:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:12 run_atlas
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:12 job.xml
[2025-10-13 10:46:21] -rw-r--r-- 2 boinc boinc 223084806 Oct 13 09:12 EVNT.46676267._004440.pool.root.1
[2025-10-13 10:46:21] -rw-r--r-- 2 boinc boinc    569680 Oct 13 09:12 input.tar.gz
[2025-10-13 10:46:21] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:12 start_atlas.sh
[2025-10-13 10:46:21] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:12 shared
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:12 boinc_setup_complete
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc      6275 Oct 13 09:12 init_data.xml
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:12 boinc_lockfile
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc      2548 Oct 13 09:12 pandaJob.out
[2025-10-13 10:46:21] -rw------- 1 boinc boinc    972849 Oct 13 09:12 agis_schedconf.cvmfs.json
[2025-10-13 10:46:21] -rw------- 1 boinc boinc   1560580 Oct 13 09:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:46:21] drwx------ 5 boinc boinc      4096 Oct 13 09:12 pilot3
[2025-10-13 10:46:21] -rw------- 1 boinc boinc 194950531 Oct 13 10:45 HITS.46676269._087004.pool.root.1
[2025-10-13 10:46:21] -rw------- 1 boinc boinc        95 Oct 13 10:45 pilot_heartbeat.json
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc       530 Oct 13 10:45 boinc_task_state.xml
[2025-10-13 10:46:21] -rw------- 1 boinc boinc      1032 Oct 13 10:45 memory_monitor_summary.json
[2025-10-13 10:46:21] -rw------- 1 boinc boinc    250315 Oct 13 10:45 log.46676269._087004.job.log.tgz.1
[2025-10-13 10:46:21] -rw------- 1 boinc boinc      7763 Oct 13 10:45 heartbeat.json
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:46 boinc_mmap_file
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:46 wrapper_checkpoint.txt
[2025-10-13 10:46:21] -rw------- 1 boinc boinc       747 Oct 13 10:46 pilotlog.txt
[2025-10-13 10:46:21] -rw------- 1 boinc boinc    814710 Oct 13 10:46 log.46676269._087004.job.log.1
[2025-10-13 10:46:21] -rw------- 1 boinc boinc       357 Oct 13 10:46 output.list
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:46 runtime_log
[2025-10-13 10:46:21] -rw------- 1 boinc boinc   1085440 Oct 13 10:46 result.tar.gz
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc      8782 Oct 13 10:46 runtime_log.err
[2025-10-13 10:46:21] -rw------- 1 boinc boinc       659 Oct 13 10:46 PScKDm1aGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbkUMDmfK9W3m.diag
[2025-10-13 10:46:21] -rw-r--r-- 1 boinc boinc     22159 Oct 13 10:46 stderr.txt
[2025-10-13 10:46:21] HITS file was successfully produced:
[2025-10-13 10:46:21] -rw------- 1 boinc boinc 194950531 Oct 13 10:45 shared/HITS.pool.root.1
[2025-10-13 10:46:21]  *** Contents of shared directory: ***
[2025-10-13 10:46:21] total 409888
[2025-10-13 10:46:21] -rw-r--r-- 2 boinc boinc 223084806 Oct 13 09:12 ATLAS.root_0
[2025-10-13 10:46:21] -rw-r--r-- 2 boinc boinc    569680 Oct 13 09:12 input.tar.gz
[2025-10-13 10:46:21] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:12 start_atlas.sh
[2025-10-13 10:46:21] -rw------- 1 boinc boinc 194950531 Oct 13 10:45 HITS.pool.root.1
[2025-10-13 10:46:21] -rw------- 1 boinc boinc   1085440 Oct 13 10:46 result.tar.gz
10:46:44 (1627068): run_atlas exited; CPU time 16044.162041
10:46:44 (1627068): called boinc_finish(0)

</stderr_txt>
]]>

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