Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:50:39 (8150): wrapper (7.7.26015): starting
18:50:39 (8150): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:50:39] Arguments: --nthreads 8
[2025-10-12 18:50:39] Threads: 8
[2025-10-12 18:50:39] Checking for CVMFS
[2025-10-12 18:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:50:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:50:39] 2.11.2.0 8318 53572 112676 151640 1 59 10090467 18432000 1833 130560 0 48768000 99.974 2538755 38896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:50:39] CVMFS is ok
[2025-10-12 18:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:50:39] Further information can be found at the LHC@home message board.
[2025-10-12 18:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:50:39] Checking for apptainer binary...
[2025-10-12 18:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:50:39] Running /usr/bin/apptainer --version
[2025-10-12 18:50:39] apptainer version 1.3.2-1.el7
[2025-10-12 18:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:50:40] c-206-28.aglt2.org
[2025-10-12 18:50:40] apptainer works
[2025-10-12 18:50:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:50:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:50:40] Starting ATLAS job with PandaID=6840750363
[2025-10-12 18:50:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:53:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:53:14] 2025-10-13 01:52:34,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:53:14] 2025-10-13 01:52:34,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:53:14] 2025-10-13 01:52:34,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:53:14] 2025-10-13 01:52:34,863 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:53:14] 2025-10-13 01:52:34,863 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,864 | INFO     | sum of deviations: 1428686978.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,864 | INFO     | mean x: 1760314903.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,864 | INFO     | mean y: 2473476.150837989
[2025-10-12 21:53:14] 2025-10-13 01:52:34,865 | INFO     | -- intersect: -1411702612.2612965
[2025-10-12 21:53:14] 2025-10-13 01:52:34,865 | INFO     | intersect: -1411702612.2612965
[2025-10-12 21:53:14] 2025-10-13 01:52:34,865 | INFO     | chi2: 1.891668878518455
[2025-10-12 21:53:14] 2025-10-13 01:52:34,865 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 21:53:14] 2025-10-13 01:52:34,866 | INFO     | sum of deviations: 12980691846.999998
[2025-10-12 21:53:14] 2025-10-13 01:52:34,867 | INFO     | mean x: 1760314750.5
[2025-10-12 21:53:14] 2025-10-13 01:52:34,867 | INFO     | mean y: 2485352.436781609
[2025-10-12 21:53:14] 2025-10-13 01:52:34,867 | INFO     | -- intersect: -13986182044.6743
[2025-10-12 21:53:14] 2025-10-13 01:52:34,867 | INFO     | intersect: -13986182044.6743
[2025-10-12 21:53:14] 2025-10-13 01:52:34,868 | INFO     | chi2: 1.115794828985779
[2025-10-12 21:53:14] 2025-10-13 01:52:34,868 | INFO     | current chi2=1.115794828985779 (change=41.015320299625394 %)
[2025-10-12 21:53:14] 2025-10-13 01:52:34,868 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,870 | INFO     | sum of deviations: 12515229822.000002
[2025-10-12 21:53:14] 2025-10-13 01:52:34,870 | INFO     | mean x: 1760314598.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,870 | INFO     | mean y: 2484833.473372781
[2025-10-12 21:53:14] 2025-10-13 01:52:34,870 | INFO     | -- intersect: -14717446631.67839
[2025-10-12 21:53:14] 2025-10-13 01:52:34,870 | INFO     | intersect: -14717446631.67839
[2025-10-12 21:53:14] 2025-10-13 01:52:34,871 | INFO     | chi2: 1.1165553964949249
[2025-10-12 21:53:14] 2025-10-13 01:52:34,871 | INFO     | current chi2=1.1165553964949249 (change=-0.06816374205973887 %)
[2025-10-12 21:53:14] 2025-10-13 01:52:34,871 | INFO     | right removable region: 168
[2025-10-12 21:53:14] 2025-10-13 01:52:34,872 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 21:53:14] 2025-10-13 01:52:34,873 | INFO     | sum of deviations: -16700682998.5
[2025-10-12 21:53:14] 2025-10-13 01:52:34,873 | INFO     | mean x: 1760315055.5
[2025-10-12 21:53:14] 2025-10-13 01:52:34,873 | INFO     | mean y: 2492199.8218390807
[2025-10-12 21:53:14] 2025-10-13 01:52:34,874 | INFO     | -- intersect: 18000018294.9116
[2025-10-12 21:53:14] 2025-10-13 01:52:34,874 | INFO     | intersect: 18000018294.9116
[2025-10-12 21:53:14] 2025-10-13 01:52:34,874 | INFO     | chi2: 0.8128379351369593
[2025-10-12 21:53:14] 2025-10-13 01:52:34,874 | INFO     | current chi2=0.8128379351369593 (change=57.03064397963931 %)
[2025-10-12 21:53:14] 2025-10-13 01:52:34,875 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,876 | INFO     | sum of deviations: -15620922516.999998
[2025-10-12 21:53:14] 2025-10-13 01:52:34,876 | INFO     | mean x: 1760315208.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,876 | INFO     | mean y: 2490994.1242603553
[2025-10-12 21:53:14] 2025-10-13 01:52:34,877 | INFO     | -- intersect: 18375225000.892433
[2025-10-12 21:53:14] 2025-10-13 01:52:34,877 | INFO     | intersect: 18375225000.892433
[2025-10-12 21:53:14] 2025-10-13 01:52:34,877 | INFO     | chi2: 0.8131344232735211
[2025-10-12 21:53:14] 2025-10-13 01:52:34,877 | INFO     | current chi2=0.8131344232735211 (change=-0.03647567660727402 %)
[2025-10-12 21:53:14] 2025-10-13 01:52:34,878 | INFO     | left removable region: 20
[2025-10-12 21:53:14] 2025-10-13 01:52:34,878 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 21:53:14] 2025-10-13 01:52:34,879 | INFO     | sum of deviations: -1266477303.000001
[2025-10-12 21:53:14] 2025-10-13 01:52:34,879 | INFO     | mean x: 1760315177.5
[2025-10-12 21:53:14] 2025-10-13 01:52:34,879 | INFO     | mean y: 2500031.756756757
[2025-10-12 21:53:14] 2025-10-13 01:52:34,880 | INFO     | -- intersect: 2220410966.140953
[2025-10-12 21:53:14] 2025-10-13 01:52:34,880 | INFO     | intersect: 2220410966.140953
[2025-10-12 21:53:14] 2025-10-13 01:52:34,880 | INFO     | chi2: 0.01308597955182943
[2025-10-12 21:53:14] 2025-10-13 01:52:34,880 | INFO     | -- intersect: 2220410966.140953
[2025-10-12 21:53:14] 2025-10-13 01:52:34,881 | INFO     | current memory leak: -1.26 B/s (using 148 data points, chi2=0.01)
[2025-10-12 21:53:14] 2025-10-13 01:52:34,881 | INFO     | could have reported an average CPU frequency of 2506 MHz (9 samples)
[2025-10-12 21:53:14] 2025-10-13 01:52:34,881 | INFO     | ..............................
[2025-10-12 21:53:14] 2025-10-13 01:52:34,881 | INFO     | . Timing measurements:
[2025-10-12 21:53:14] 2025-10-13 01:52:34,882 | INFO     | . get job = 0 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,882 | INFO     | . initial setup = 2 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,882 | INFO     | . payload setup = 4 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,882 | INFO     | . stage-in = 0 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,882 | INFO     | . payload execution = 10874 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,882 | INFO     | . stage-out = 2 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,883 | INFO     | . log creation = 0 s
[2025-10-12 21:53:14] 2025-10-13 01:52:34,883 | INFO     | ..............................
[2025-10-12 21:53:14] 2025-10-13 01:52:35,040 | INFO     | 
[2025-10-12 21:53:14] 2025-10-13 01:52:35,040 | INFO     | job summary report
[2025-10-12 21:53:14] 2025-10-13 01:52:35,040 | INFO     | --------------------------------------------------
[2025-10-12 21:53:14] 2025-10-13 01:52:35,041 | INFO     | PanDA job id: 6840750363
[2025-10-12 21:53:14] 2025-10-13 01:52:35,041 | INFO     | task id: 46676269
[2025-10-12 21:53:14] 2025-10-13 01:52:35,041 | INFO     | errors: (none)
[2025-10-12 21:53:14] 2025-10-13 01:52:35,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:53:14] 2025-10-13 01:52:35,041 | INFO     | pilot state: finished 
[2025-10-12 21:53:14] 2025-10-13 01:52:35,041 | INFO     | transexitcode: 0
[2025-10-12 21:53:14] 2025-10-13 01:52:35,042 | INFO     | exeerrorcode: 0
[2025-10-12 21:53:14] 2025-10-13 01:52:35,042 | INFO     | exeerrordiag: 
[2025-10-12 21:53:14] 2025-10-13 01:52:35,042 | INFO     | exitcode: 0
[2025-10-12 21:53:14] 2025-10-13 01:52:35,042 | INFO     | exitmsg: OK
[2025-10-12 21:53:14] 2025-10-13 01:52:35,042 | INFO     | cpuconsumptiontime: 83330 s
[2025-10-12 21:53:14] 2025-10-13 01:52:35,042 | INFO     | nevents: 400
[2025-10-12 21:53:14] 2025-10-13 01:52:35,043 | INFO     | neventsw: 0
[2025-10-12 21:53:14] 2025-10-13 01:52:35,043 | INFO     | pid: 20360
[2025-10-12 21:53:14] 2025-10-13 01:52:35,043 | INFO     | pgrp: 20360
[2025-10-12 21:53:14] 2025-10-13 01:52:35,043 | INFO     | corecount: 8
[2025-10-12 21:53:14] 2025-10-13 01:52:35,043 | INFO     | event service: False
[2025-10-12 21:53:14] 2025-10-13 01:52:35,043 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10882: 2378249, 10884: 2387303, 10889: 2387505}
[2025-10-12 21:53:14] 2025-10-13 01:52:35,044 | INFO     | --------------------------------------------------
[2025-10-12 21:53:14] 2025-10-13 01:52:35,044 | INFO     | 
[2025-10-12 21:53:14] 2025-10-13 01:52:35,044 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:53:14] 2025-10-13 01:52:35,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:53:14] 2025-10-13 01:52:35,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:53:14] 2025-10-13 01:52:35,082 | INFO     | job 6840750363 has completed (purged errors)
[2025-10-12 21:53:14] 2025-10-13 01:52:35,082 | INFO     | overall cleanup function is called
[2025-10-12 21:53:14] 2025-10-13 01:52:36,090 | INFO     | --- collectZombieJob: --- 10, [20360]
[2025-10-12 21:53:14] 2025-10-13 01:52:36,091 | INFO     | zombie collector waiting for pid 20360
[2025-10-12 21:53:14] 2025-10-13 01:52:36,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:53:14] 2025-10-13 01:52:36,091 | INFO     | collected zombie processes
[2025-10-12 21:53:14] 2025-10-13 01:52:36,091 | INFO     | will attempt to kill all subprocesses of pid=20360
[2025-10-12 21:53:14] 2025-10-13 01:52:36,252 | INFO     | process IDs to be killed: [20360] (in reverse order)
[2025-10-12 21:53:14] 2025-10-13 01:52:36,309 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:53:14] 2025-10-13 01:52:36,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:53:14] 2025-10-13 01:52:36,313 | INFO     | did not find any defunct processes belonging to 20360
[2025-10-12 21:53:14] 2025-10-13 01:52:36,318 | INFO     | did not find any defunct processes belonging to 20360
[2025-10-12 21:53:14] 2025-10-13 01:52:36,318 | INFO     | ready for new job
[2025-10-12 21:53:14] 2025-10-13 01:52:36,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:53:14] 2025-10-13 01:52:36,320 | INFO     | ***************************************
[2025-10-12 21:53:14] 2025-10-13 01:52:36,321 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:53:14] 2025-10-13 01:52:36,321 | INFO     | ***************************************
[2025-10-12 21:53:14] 2025-10-13 01:52:36,321 | INFO     | 
[2025-10-12 21:53:14] 2025-10-13 01:52:36,322 | INFO     | architecture information:
[2025-10-12 21:53:14] 2025-10-13 01:52:36,323 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:53:14] 2025-10-13 01:52:36,335 | INFO     | cat /etc/os-release:
[2025-10-12 21:53:14] NAME="CentOS Linux"
[2025-10-12 21:53:14] VERSION="7 (Core)"
[2025-10-12 21:53:14] ID="centos"
[2025-10-12 21:53:14] ID_LIKE="rhel fedora"
[2025-10-12 21:53:14] VERSION_ID="7"
[2025-10-12 21:53:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:53:14] ANSI_COLOR="0;31"
[2025-10-12 21:53:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:53:14] HOME_URL="https://www.centos.org/"
[2025-10-12 21:53:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:53:14] 
[2025-10-12 21:53:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:53:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:53:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:53:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:53:14] 
[2025-10-12 21:53:14] 2025-10-13 01:52:36,336 | INFO     | ***************************************
[2025-10-12 21:53:14] 2025-10-13 01:52:36,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:53:14] 2025-10-13 01:52:36,875 | INFO     | sufficient remaining disk space (27896315904 B)
[2025-10-12 21:53:14] 2025-10-13 01:52:36,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:53:14] 2025-10-13 01:52:36,876 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:53:14] 2025-10-13 01:52:36,876 | INFO     | update_server=False
[2025-10-12 21:53:14] 2025-10-13 01:52:36,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:53:14] 2025-10-13 01:52:36,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:53:14] 2025-10-13 01:52:36,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:53:14] 2025-10-13 01:52:37,249 | INFO     | all payload control threads have been joined
[2025-10-12 21:53:14] 2025-10-13 01:52:37,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:53:14] 2025-10-13 01:52:37,489 | INFO     | aborting loop
[2025-10-12 21:53:14] 2025-10-13 01:52:37,540 | INFO     | all data control threads have been joined
[2025-10-12 21:53:14] 2025-10-13 01:52:37,881 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:37,885 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:37,936 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:37,936 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,255 | INFO     | [payload] control thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:53:14] 2025-10-13 01:52:38,439 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,479 | INFO     | all job control threads have been joined
[2025-10-12 21:53:14] 2025-10-13 01:52:38,483 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,494 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,545 | INFO     | [data] control thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:38,733 | INFO     | [job] validate thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:39,260 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:39,334 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:39,485 | INFO     | [job] control thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:40,319 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:52:40,882 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:53:14] 2025-10-13 01:53:07,969 | INFO     | PID=12233 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:53:14] 2025-10-13 01:53:07,969 | INFO     | .. there are 3 such processes running
[2025-10-12 21:53:14] 2025-10-13 01:53:07,970 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:53:14] 2025-10-13 01:53:07,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:53:14] 2025-10-13 01:53:07,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:53:14] 2025-10-13 01:53:08,713 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:53:14] 2025-10-13 01:53:09,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160850327360)>', '<ExcThread(monitor, started 140160268228352)>']
[2025-10-12 21:53:14] 2025-10-13 01:53:09,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:53:14] 2025-10-13 01:53:09,981 | INFO     | [monitor] control thread has ended
[2025-10-12 21:53:14] 2025-10-13 01:53:14,626 | INFO     | all workflow threads have been joined
[2025-10-12 21:53:14] 2025-10-13 01:53:14,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:53:14] 2025-10-13 01:53:14,627 | INFO     | traces error code: 0
[2025-10-12 21:53:14] 2025-10-13 01:53:14,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:53:14] 2025-10-13 01:53:14,746 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:53:14] 2025-10-13 01:53:14,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:53:14] 2025-10-13 01:53:14,750 [wrapper] pilotpid: 12233
[2025-10-12 21:53:14] 2025-10-13 01:53:14,752 [wrapper] Pilot exit status: 0
[2025-10-12 21:53:14] 2025-10-13 01:53:14,762 [wrapper] pandaids: 6840750363
[2025-10-12 21:53:14] 2025-10-13 01:53:14,790 [wrapper] cleanup supervisor_pilot 16975 12234
[2025-10-12 21:53:14] 2025-10-13 01:53:14,793 [wrapper] Test setup, not cleaning
[2025-10-12 21:53:14] 2025-10-13 01:53:14,795 [wrapper] apfmon messages muted
[2025-10-12 21:53:14] 2025-10-13 01:53:14,797 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:53:14] 2025-10-13 01:53:14,799 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:53:14]  *** Error codes and diagnostics ***
[2025-10-12 21:53:14]     "exeErrorCode": 0,
[2025-10-12 21:53:14]     "exeErrorDiag": "",
[2025-10-12 21:53:14]     "pilotErrorCode": 0,
[2025-10-12 21:53:14]     "pilotErrorDiag": "",
[2025-10-12 21:53:14]  *** Listing of results directory ***
[2025-10-12 21:53:14] total 413024
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-12 21:53:14] -rwx------ 1 boincer umatlas     36292 Oct 12 17:17 runpilot2-wrapper.sh
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:17 queuedata.json
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:53:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:50 run_atlas
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:50 job.xml
[2025-10-12 21:53:14] -rw-r--r-- 2 boincer umatlas 220418489 Oct 12 18:50 EVNT.46676267._004779.pool.root.1
[2025-10-12 21:53:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:50 start_atlas.sh
[2025-10-12 21:53:14] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:50 shared
[2025-10-12 21:53:14] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 18:50 input.tar.gz
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:50 boinc_lockfile
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 18:50 pandaJob.out
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas    975603 Oct 12 18:50 agis_schedconf.cvmfs.json
[2025-10-12 21:53:14] drwx------ 5 boincer umatlas      4096 Oct 12 18:50 pilot3
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 21:46 init_data.xml
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas 194720810 Oct 12 21:51 HITS.46676269._089735.pool.root.1
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas       531 Oct 12 21:51 boinc_task_state.xml
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas      1054 Oct 12 21:52 memory_monitor_summary.json
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas   1560580 Oct 12 21:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas    421218 Oct 12 21:52 log.46676269._089735.job.log.tgz.1
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas      7856 Oct 12 21:52 heartbeat.json
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:52 boinc_mmap_file
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas        28 Oct 12 21:52 wrapper_checkpoint.txt
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas        95 Oct 12 21:53 pilot_heartbeat.json
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas      4821 Oct 12 21:53 pilotlog.txt
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas   1526542 Oct 12 21:53 log.46676269._089735.job.log.1
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas       357 Oct 12 21:53 output.list
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:53 runtime_log
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas   1966080 Oct 12 21:53 result.tar.gz
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas       662 Oct 12 21:53 xHQNDmjcIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUblNDm8prkVm.diag
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 21:53 runtime_log.err
[2025-10-12 21:53:14] -rw-r--r-- 1 boincer umatlas     20842 Oct 12 21:53 stderr.txt
[2025-10-12 21:53:14] HITS file was successfully produced:
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas 194720810 Oct 12 21:51 shared/HITS.pool.root.1
[2025-10-12 21:53:14]  *** Contents of shared directory: ***
[2025-10-12 21:53:14] total 407916
[2025-10-12 21:53:14] -rw-r--r-- 2 boincer umatlas 220418489 Oct 12 18:50 ATLAS.root_0
[2025-10-12 21:53:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:50 start_atlas.sh
[2025-10-12 21:53:14] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 18:50 input.tar.gz
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas 194720810 Oct 12 21:51 HITS.pool.root.1
[2025-10-12 21:53:14] -rw------- 1 boincer umatlas   1966080 Oct 12 21:53 result.tar.gz
21:53:16 (8150): run_atlas exited; CPU time 83435.898951
21:53:16 (8150): called boinc_finish(0)

</stderr_txt>
]]>

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