Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:58 (2051864): wrapper (7.7.26015): starting
14:48:58 (2051864): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 14:48:58] Arguments: --nthreads 12
[2025-10-13 14:48:58] Threads: 12
[2025-10-13 14:48:58] Checking for CVMFS
[2025-10-13 14:48:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:48:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:48:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:48:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:48:58] 2.13.1.0 2980946 5821 77524 151661 3 57 2963814 4097024 0 130560 0 9235600 99.995 194228 7702 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 14:48:58] CVMFS is ok
[2025-10-13 14:48:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:48:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:48:58] Further information can be found at the LHC@home message board.
[2025-10-13 14:48:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:48:58] Checking for apptainer binary...
[2025-10-13 14:48:58] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 14:48:58] apptainer is not installed, using version from CVMFS
[2025-10-13 14:48:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:48:58] pckelar2.cern.ch
[2025-10-13 14:48:58] apptainer works
[2025-10-13 14:48:58] Set ATHENA_PROC_NUMBER=12
[2025-10-13 14:48:58] Set ATHENA_CORE_NUMBER=12
[2025-10-13 14:48:58] Starting ATLAS job with PandaID=6840750267
[2025-10-13 14:48:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:37:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:37:17]  replicas=None
[2025-10-13 15:37:17]  scope=mc23_13p6TeV
[2025-10-13 15:37:17]  status=None
[2025-10-13 15:37:17]  status_code=0
[2025-10-13 15:37:17]  storage_token=
[2025-10-13 15:37:17]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6840750267/log.46676269._089646.job.log.tgz.1
[2025-10-13 15:37:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/b9/log.46676269._089646.job.log.tgz.1
[2025-10-13 15:37:17]  workdir=None
[2025-10-13 15:37:17] ]
[2025-10-13 15:37:17] 2025-10-13 13:36:10,474 | INFO     | transferring file log.46676269._089646.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6840750267/log.46676269._089646.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 15:37:17] 2025-10-13 13:36:10,474 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6840750267/log.46676269._089646.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._089646.job
[2025-10-13 15:37:17] 2025-10-13 13:36:10,486 | INFO     | adding to output.list: log.46676269._089646.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/b9/log.46676269._089646.job.log.tg
[2025-10-13 15:37:17] 2025-10-13 13:36:10,487 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 15:37:17] 2025-10-13 13:36:10,487 | INFO     | summary of transferred files:
[2025-10-13 15:37:17] 2025-10-13 13:36:10,487 | INFO     |  -- lfn=log.46676269._089646.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 15:37:17] 2025-10-13 13:36:10,487 | INFO     | stage-out finished correctly
[2025-10-13 15:37:17] 2025-10-13 13:36:10,763 | INFO     | time since job start (2824s) is within the limit (172800.0s)
[2025-10-13 15:37:17] 2025-10-13 13:36:11,502 | INFO     | monitor loop #220: job 0:6840750267 is in state 'finished'
[2025-10-13 15:37:17] 2025-10-13 13:36:11,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:37:17] 2025-10-13 13:36:11,946 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 15:37:17] 2025-10-13 13:36:12,584 | INFO     | job 6840750267 has state=finished
[2025-10-13 15:37:17] 2025-10-13 13:36:12,584 | INFO     | preparing for final server update for job 6840750267 in state='finished'
[2025-10-13 15:37:17] 2025-10-13 13:36:12,584 | INFO     | this job has now completed (state=finished)
[2025-10-13 15:37:17] 2025-10-13 13:36:12,585 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 15:37:17] 2025-10-13 13:36:12,585 | INFO     | log transfer has been attempted: DONE
[2025-10-13 15:37:17] 2025-10-13 13:36:12,585 | INFO     | job 6840750267 has finished - writing final server update
[2025-10-13 15:37:17] 2025-10-13 13:36:12,585 | INFO     | total number of processed events: 400 (read)
[2025-10-13 15:37:17] 2025-10-13 13:36:12,587 | INFO     | executing command: lscpu
[2025-10-13 15:37:17] 2025-10-13 13:36:12,609 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 15:37:17] 2025-10-13 13:36:12,769 | INFO     | time since job start (2826s) is within the limit (172800.0s)
[2025-10-13 15:37:17] 2025-10-13 13:36:14,005 | INFO     | monitor loop #221: job 0:6840750267 is in state 'finished'
[2025-10-13 15:37:17] 2025-10-13 13:36:14,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:37:17] 2025-10-13 13:36:14,774 | INFO     | time since job start (2828s) is within the limit (172800.0s)
[2025-10-13 15:37:17] 2025-10-13 13:36:16,508 | INFO     | monitor loop #222: job 0:6840750267 is in state 'finished'
[2025-10-13 15:37:17] 2025-10-13 13:36:16,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:37:17] 2025-10-13 13:36:16,779 | INFO     | time since job start (2830s) is within the limit (172800.0s)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,428 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 15:37:17] 2025-10-13 13:36:17,430 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2537.99255
[2025-10-13 15:37:17] 2025-10-13 13:36:17,433 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840750267/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,433 | INFO     | extracted standard info from prmon json
[2025-10-13 15:37:17] 2025-10-13 13:36:17,434 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 15:37:17] 2025-10-13 13:36:17,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 15:37:17] 2025-10-13 13:36:17,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 15:37:17] 2025-10-13 13:36:17,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | fitting pss+swap vs Time
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | sum of square deviations: 18381740.0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | sum of deviations: -4432540234.000001
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | mean x: 1760361236.0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | mean y: 2978083.641025641
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | -- intersect: 424493369360.19977
[2025-10-13 15:37:17] 2025-10-13 13:36:17,435 | INFO     | intersect: 424493369360.19977
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | chi2: 0.05368465231225409
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | -- intersect: 424493369360.19977
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | current memory leak: -241.14 B/s (using 39 data points, chi2=0.05)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | could have reported an average CPU frequency of 2522 MHz (5 samples)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | ..............................
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . Timing measurements:
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . get job = 0 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . initial setup = 1 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . payload setup = 6 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . stage-in = 0 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . payload execution = 2797 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . stage-out = 0 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,436 | INFO     | . log creation = 0 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,437 | INFO     | ..............................
[2025-10-13 15:37:17] 2025-10-13 13:36:17,495 | INFO     | 
[2025-10-13 15:37:17] 2025-10-13 13:36:17,495 | INFO     | job summary report
[2025-10-13 15:37:17] 2025-10-13 13:36:17,495 | INFO     | --------------------------------------------------
[2025-10-13 15:37:17] 2025-10-13 13:36:17,495 | INFO     | PanDA job id: 6840750267
[2025-10-13 15:37:17] 2025-10-13 13:36:17,495 | INFO     | task id: 46676269
[2025-10-13 15:37:17] 2025-10-13 13:36:17,495 | INFO     | errors: (none)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | pilot state: finished 
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | transexitcode: 0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | exeerrorcode: 0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | exeerrordiag: 
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | exitcode: 0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | exitmsg: OK
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | cpuconsumptiontime: 29623 s
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | nevents: 400
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | neventsw: 0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | pid: 2063113
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | pgrp: 2063113
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | corecount: 12
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | event service: False
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | sizes: {0: 2348680, 1: 2348879, 5: 2349141, 11: 2349197, 2808: 2374567, 2809: 2383565, 2811: 2383749, 2816: 2383975}
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | --------------------------------------------------
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | 
[2025-10-13 15:37:17] 2025-10-13 13:36:17,496 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 15:37:17] 2025-10-13 13:36:17,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:37:17] 2025-10-13 13:36:17,514 | INFO     | job 6840750267 has completed (purged errors)
[2025-10-13 15:37:17] 2025-10-13 13:36:17,515 | INFO     | overall cleanup function is called
[2025-10-13 15:37:17] 2025-10-13 13:36:18,521 | INFO     | --- collectZombieJob: --- 10, [2063113]
[2025-10-13 15:37:17] 2025-10-13 13:36:18,521 | INFO     | zombie collector waiting for pid 2063113
[2025-10-13 15:37:17] 2025-10-13 13:36:18,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:37:17] 2025-10-13 13:36:18,522 | INFO     | collected zombie processes
[2025-10-13 15:37:17] 2025-10-13 13:36:18,522 | INFO     | will attempt to kill all subprocesses of pid=2063113
[2025-10-13 15:37:17] 2025-10-13 13:36:18,599 | INFO     | process IDs to be killed: [2063113] (in reverse order)
[2025-10-13 15:37:17] 2025-10-13 13:36:18,633 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:37:17] 2025-10-13 13:36:18,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:37:17] 2025-10-13 13:36:18,636 | INFO     | did not find any defunct processes belonging to 2063113
[2025-10-13 15:37:17] 2025-10-13 13:36:18,639 | INFO     | did not find any defunct processes belonging to 2063113
[2025-10-13 15:37:17] 2025-10-13 13:36:18,639 | INFO     | ready for new job
[2025-10-13 15:37:17] 2025-10-13 13:36:18,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:37:17] 2025-10-13 13:36:18,640 | INFO     | ***************************************
[2025-10-13 15:37:17] 2025-10-13 13:36:18,640 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:37:17] 2025-10-13 13:36:18,640 | INFO     | ***************************************
[2025-10-13 15:37:17] 2025-10-13 13:36:18,640 | INFO     | 
[2025-10-13 15:37:17] 2025-10-13 13:36:18,641 | INFO     | architecture information:
[2025-10-13 15:37:17] 2025-10-13 13:36:18,642 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:37:17] 2025-10-13 13:36:18,652 | INFO     | cat /etc/os-release:
[2025-10-13 15:37:17] NAME="CentOS Linux"
[2025-10-13 15:37:17] VERSION="7 (Core)"
[2025-10-13 15:37:17] ID="centos"
[2025-10-13 15:37:17] ID_LIKE="rhel fedora"
[2025-10-13 15:37:17] VERSION_ID="7"
[2025-10-13 15:37:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:37:17] ANSI_COLOR="0;31"
[2025-10-13 15:37:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:37:17] HOME_URL="https://www.centos.org/"
[2025-10-13 15:37:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:37:17] 
[2025-10-13 15:37:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:37:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:37:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:37:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:37:17] 
[2025-10-13 15:37:17] 2025-10-13 13:36:18,653 | INFO     | ***************************************
[2025-10-13 15:37:17] 2025-10-13 13:36:19,156 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 15:37:17] 2025-10-13 13:36:19,166 | INFO     | sufficient remaining disk space (232834203648 B)
[2025-10-13 15:37:17] 2025-10-13 13:36:19,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:37:17] 2025-10-13 13:36:19,166 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:37:17] 2025-10-13 13:36:19,166 | INFO     | update_server=False
[2025-10-13 15:37:17] 2025-10-13 13:36:19,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:37:17] 2025-10-13 13:36:19,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:37:17] 2025-10-13 13:36:19,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:37:17] 2025-10-13 13:36:20,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:37:17] 2025-10-13 13:36:20,016 | INFO     | aborting loop
[2025-10-13 15:37:17] 2025-10-13 13:36:20,141 | INFO     | all job control threads have been joined
[2025-10-13 15:37:17] 2025-10-13 13:36:20,172 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:20,172 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:20,186 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:20,218 | INFO     | all data control threads have been joined
[2025-10-13 15:37:17] 2025-10-13 13:36:20,279 | INFO     | all payload control threads have been joined
[2025-10-13 15:37:17] 2025-10-13 13:36:20,451 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:20,614 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:20,709 | INFO     | [job] validate thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:20,975 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,021 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,046 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,146 | INFO     | [job] control thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,170 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,173 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,224 | INFO     | [data] control thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:21,283 | INFO     | [payload] control thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:22,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:37:17] 2025-10-13 13:36:26,518 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:29,710 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:37:17] 2025-10-13 13:36:30,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:37:17] 2025-10-13 13:36:49,942 | INFO     | PID=2055681 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:37:17] 2025-10-13 13:36:49,943 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:37:17] 2025-10-13 13:36:49,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:37:17] 2025-10-13 13:36:49,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:37:17] 2025-10-13 13:37:10,638 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:37:17] 2025-10-13 13:37:12,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652599289664)>', '<ExcThread(monitor, started 139651910190848)>']
[2025-10-13 15:37:17] 2025-10-13 13:37:13,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:37:17] 2025-10-13 13:37:13,050 | INFO     | [monitor] control thread has ended
[2025-10-13 15:37:17] 2025-10-13 13:37:17,155 | INFO     | all workflow threads have been joined
[2025-10-13 15:37:17] 2025-10-13 13:37:17,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:37:17] 2025-10-13 13:37:17,155 | INFO     | traces error code: 0
[2025-10-13 15:37:17] 2025-10-13 13:37:17,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:37:17] 2025-10-13 13:37:17,222 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:37:17] 2025-10-13 13:37:17,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:37:17] 2025-10-13 13:37:17,227 [wrapper] pilotpid: 2055681
[2025-10-13 15:37:17] 2025-10-13 13:37:17,229 [wrapper] Pilot exit status: 0
[2025-10-13 15:37:17] 2025-10-13 13:37:17,236 [wrapper] pandaids: 6840750267
[2025-10-13 15:37:17] 2025-10-13 13:37:17,259 [wrapper] cleanup supervisor_pilot 2076270 2055682
[2025-10-13 15:37:17] 2025-10-13 13:37:17,261 [wrapper] Test setup, not cleaning
[2025-10-13 15:37:17] 2025-10-13 13:37:17,263 [wrapper] apfmon messages muted
[2025-10-13 15:37:17] 2025-10-13 13:37:17,265 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:37:17] 2025-10-13 13:37:17,267 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:37:17]  *** Error codes and diagnostics ***
[2025-10-13 15:37:17]     "exeErrorCode": 0,
[2025-10-13 15:37:17]     "exeErrorDiag": "",
[2025-10-13 15:37:17]     "pilotErrorCode": 0,
[2025-10-13 15:37:17]     "pilotErrorDiag": "",
[2025-10-13 15:37:17]  *** Listing of results directory ***
[2025-10-13 15:37:17] total 413296
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:12 queuedata.json
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:12 pilot3.tar.gz
[2025-10-13 15:37:17] -rwx------ 1 boinc boinc     36292 Oct 12 23:14 runpilot2-wrapper.sh
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:37:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:48 run_atlas
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:48 job.xml
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc      6533 Oct 13 14:48 init_data.xml
[2025-10-13 15:37:17] -rw-r--r-- 2 boinc boinc 223621129 Oct 13 14:48 EVNT.46676267._004776.pool.root.1
[2025-10-13 15:37:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:48 start_atlas.sh
[2025-10-13 15:37:17] drwxrwx--x 2 boinc boinc        68 Oct 13 14:48 shared
[2025-10-13 15:37:17] -rw-r--r-- 2 boinc boinc    569682 Oct 13 14:48 input.tar.gz
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:48 boinc_lockfile
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc      2547 Oct 13 14:48 pandaJob.out
[2025-10-13 15:37:17] -rw------- 1 boinc boinc    972497 Oct 13 14:49 agis_schedconf.cvmfs.json
[2025-10-13 15:37:17] -rw------- 1 boinc boinc   1560580 Oct 13 14:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:37:17] drwx------ 5 boinc boinc      4096 Oct 13 14:49 pilot3
[2025-10-13 15:37:17] -rw------- 1 boinc boinc 194145506 Oct 13 15:35 HITS.46676269._089646.pool.root.1
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc       529 Oct 13 15:35 boinc_task_state.xml
[2025-10-13 15:37:17] -rw------- 1 boinc boinc      1017 Oct 13 15:36 memory_monitor_summary.json
[2025-10-13 15:37:17] -rw------- 1 boinc boinc    344569 Oct 13 15:36 log.46676269._089646.job.log.tgz.1
[2025-10-13 15:37:17] -rw------- 1 boinc boinc      7795 Oct 13 15:36 heartbeat.json
[2025-10-13 15:37:17] -rw------- 1 boinc boinc        95 Oct 13 15:36 pilot_heartbeat.json
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:36 wrapper_checkpoint.txt
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:36 boinc_mmap_file
[2025-10-13 15:37:17] -rw------- 1 boinc boinc      4821 Oct 13 15:37 pilotlog.txt
[2025-10-13 15:37:17] -rw------- 1 boinc boinc    436513 Oct 13 15:37 log.46676269._089646.job.log.1
[2025-10-13 15:37:17] -rw------- 1 boinc boinc       357 Oct 13 15:37 output.list
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:37 runtime_log
[2025-10-13 15:37:17] -rw------- 1 boinc boinc    798720 Oct 13 15:37 result.tar.gz
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc      8727 Oct 13 15:37 runtime_log.err
[2025-10-13 15:37:17] -rw------- 1 boinc boinc       655 Oct 13 15:37 OgrLDmiZIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKblNDmMl4HBn.diag
[2025-10-13 15:37:17] -rw-r--r-- 1 boinc boinc     21949 Oct 13 15:37 stderr.txt
[2025-10-13 15:37:17] HITS file was successfully produced:
[2025-10-13 15:37:17] -rw------- 1 boinc boinc 194145506 Oct 13 15:35 shared/HITS.pool.root.1
[2025-10-13 15:37:17]  *** Contents of shared directory: ***
[2025-10-13 15:37:17] total 409336
[2025-10-13 15:37:17] -rw-r--r-- 2 boinc boinc 223621129 Oct 13 14:48 ATLAS.root_0
[2025-10-13 15:37:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:48 start_atlas.sh
[2025-10-13 15:37:17] -rw-r--r-- 2 boinc boinc    569682 Oct 13 14:48 input.tar.gz
[2025-10-13 15:37:17] -rw------- 1 boinc boinc 194145506 Oct 13 15:35 HITS.pool.root.1
[2025-10-13 15:37:17] -rw------- 1 boinc boinc    798720 Oct 13 15:37 result.tar.gz
15:37:18 (2051864): run_atlas exited; CPU time 29623.521335
15:37:18 (2051864): called boinc_finish(0)

</stderr_txt>
]]>

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