Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:54:21 (775322): wrapper (7.7.26015): starting
19:54:21 (775322): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:54:21] Arguments: --nthreads 8
[2025-10-12 19:54:21] Threads: 8
[2025-10-12 19:54:21] Checking for CVMFS
[2025-10-12 19:54:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:54:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:54:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:54:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:54:23] 2.13.2.0 5948 6366 148984 151641 0 346 40177950 40960000 20642 16776704 0 16816172 99.929 2550165 29719 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:54:23] CVMFS is ok
[2025-10-12 19:54:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:54:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:54:23] Further information can be found at the LHC@home message board.
[2025-10-12 19:54:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:54:23] Checking for apptainer binary...
[2025-10-12 19:54:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:54:23] Running /usr/bin/apptainer --version
[2025-10-12 19:54:23] apptainer version 1.4.3-1.el9
[2025-10-12 19:54:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:54:24] c-211-35-2.aglt2.org
[2025-10-12 19:54:24] apptainer works
[2025-10-12 19:54:24] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:54:24] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:54:24] Starting ATLAS job with PandaID=6840711567
[2025-10-12 19:54:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:49:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:49:33] 2025-10-13 08:48:24,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:49:33] 2025-10-13 08:48:25,032 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:49:33] 2025-10-13 08:48:25,060 | INFO     | sum of square deviations: 44108699536.15353
[2025-10-13 04:49:33] 2025-10-13 08:48:25,093 | INFO     | sum of deviations: 87565611017.62077
[2025-10-13 04:49:33] 2025-10-13 08:48:25,094 | INFO     | mean x: 1760329345.1226053
[2025-10-13 04:49:33] 2025-10-13 08:48:25,094 | INFO     | mean y: 2490015.396551724
[2025-10-13 04:49:33] 2025-10-13 08:48:25,094 | INFO     | -- intersect: -3492156535.485443
[2025-10-13 04:49:33] 2025-10-13 08:48:25,110 | INFO     | intersect: -3492156535.485443
[2025-10-13 04:49:33] 2025-10-13 08:48:25,111 | INFO     | chi2: 3.633650920187172
[2025-10-13 04:49:33] 2025-10-13 08:48:25,112 | INFO     | sum of square deviations: 42853414967.45068
[2025-10-13 04:49:33] 2025-10-13 08:48:25,147 | INFO     | sum of deviations: 151358012342.35025
[2025-10-13 04:49:33] 2025-10-13 08:48:25,147 | INFO     | mean x: 1760329192.622824
[2025-10-13 04:49:33] 2025-10-13 08:48:25,147 | INFO     | mean y: 2497719.088974855
[2025-10-13 04:49:33] 2025-10-13 08:48:25,147 | INFO     | -- intersect: -6214974747.59727
[2025-10-13 04:49:33] 2025-10-13 08:48:25,147 | INFO     | intersect: -6214974747.59727
[2025-10-13 04:49:33] 2025-10-13 08:48:25,148 | INFO     | chi2: 2.2475020384484656
[2025-10-13 04:49:33] 2025-10-13 08:48:25,148 | INFO     | current chi2=2.2475020384484656 (change=38.14755220535342 %)
[2025-10-13 04:49:33] 2025-10-13 08:48:25,149 | INFO     | sum of square deviations: 41622145460.49219
[2025-10-13 04:49:33] 2025-10-13 08:48:25,200 | INFO     | sum of deviations: 149573366794.4609
[2025-10-13 04:49:33] 2025-10-13 08:48:25,201 | INFO     | mean x: 1760329040.1210938
[2025-10-13 04:49:33] 2025-10-13 08:48:25,201 | INFO     | mean y: 2497498.041015625
[2025-10-13 04:49:33] 2025-10-13 08:48:25,201 | INFO     | -- intersect: -6323421992.26726
[2025-10-13 04:49:33] 2025-10-13 08:48:25,201 | INFO     | intersect: -6323421992.26726
[2025-10-13 04:49:33] 2025-10-13 08:48:25,202 | INFO     | chi2: 2.247735073687603
[2025-10-13 04:49:33] 2025-10-13 08:48:25,202 | INFO     | current chi2=2.247735073687603 (change=-0.010368633049089849 %)
[2025-10-13 04:49:33] 2025-10-13 08:48:25,203 | INFO     | right removable region: 511
[2025-10-13 04:49:33] 2025-10-13 08:48:25,216 | INFO     | sum of square deviations: 42853311756.69635
[2025-10-13 04:49:33] 2025-10-13 08:48:25,260 | INFO     | sum of deviations: -26294384870.812374
[2025-10-13 04:49:33] 2025-10-13 08:48:25,260 | INFO     | mean x: 1760329497.6286266
[2025-10-13 04:49:33] 2025-10-13 08:48:25,260 | INFO     | mean y: 2503810.4332688586
[2025-10-13 04:49:33] 2025-10-13 08:48:25,260 | INFO     | -- intersect: 1082625262.2568383
[2025-10-13 04:49:33] 2025-10-13 08:48:25,260 | INFO     | intersect: 1082625262.2568383
[2025-10-13 04:49:33] 2025-10-13 08:48:25,261 | INFO     | chi2: 1.5639529646824366
[2025-10-13 04:49:33] 2025-10-13 08:48:25,261 | INFO     | current chi2=1.5639529646824366 (change=56.95918515469626 %)
[2025-10-13 04:49:33] 2025-10-13 08:48:25,262 | INFO     | sum of square deviations: 41621970939.70105
[2025-10-13 04:49:33] 2025-10-13 08:48:25,322 | INFO     | sum of deviations: -40175665724.50781
[2025-10-13 04:49:33] 2025-10-13 08:48:25,322 | INFO     | mean x: 1760329650.1347656
[2025-10-13 04:49:33] 2025-10-13 08:48:25,322 | INFO     | mean y: 2505522.6015625
[2025-10-13 04:49:33] 2025-10-13 08:48:25,322 | INFO     | -- intersect: 1701666182.033374
[2025-10-13 04:49:33] 2025-10-13 08:48:25,323 | INFO     | intersect: 1701666182.033374
[2025-10-13 04:49:33] 2025-10-13 08:48:25,323 | INFO     | chi2: 1.5242136979212404
[2025-10-13 04:49:33] 2025-10-13 08:48:25,324 | INFO     | current chi2=1.5242136979212404 (change=2.5409502496940717 %)
[2025-10-13 04:49:33] 2025-10-13 08:48:25,324 | INFO     | left removable region: 20
[2025-10-13 04:49:33] 2025-10-13 08:48:25,352 | INFO     | sum of square deviations: 36707936530.91238
[2025-10-13 04:49:33] 2025-10-13 08:48:25,384 | INFO     | sum of deviations: 45674476987.74745
[2025-10-13 04:49:33] 2025-10-13 08:48:25,385 | INFO     | mean x: 1760329619.641548
[2025-10-13 04:49:33] 2025-10-13 08:48:25,385 | INFO     | mean y: 2510397.384928717
[2025-10-13 04:49:33] 2025-10-13 08:48:25,385 | INFO     | -- intersect: -2187809797.68951
[2025-10-13 04:49:33] 2025-10-13 08:48:25,385 | INFO     | intersect: -2187809797.68951
[2025-10-13 04:49:33] 2025-10-13 08:48:25,411 | INFO     | chi2: 0.04689598647852965
[2025-10-13 04:49:33] 2025-10-13 08:48:25,412 | INFO     | -- intersect: -2187809797.68951
[2025-10-13 04:49:33] 2025-10-13 08:48:25,412 | INFO     | current memory leak: 1.24 B/s (using 491 data points, chi2=0.05)
[2025-10-13 04:49:33] 2025-10-13 08:48:25,413 | INFO     | could have reported an average CPU frequency of 2533 MHz (21 samples)
[2025-10-13 04:49:33] 2025-10-13 08:48:25,413 | INFO     | ..............................
[2025-10-13 04:49:33] 2025-10-13 08:48:25,413 | INFO     | . Timing measurements:
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . get job = 0 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . initial setup = 3 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . payload setup = 34 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . stage-in = 0 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . payload execution = 31831 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . stage-out = 5 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | . log creation = 1 s
[2025-10-13 04:49:33] 2025-10-13 08:48:25,414 | INFO     | ..............................
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | 
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | job summary report
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | --------------------------------------------------
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | PanDA job id: 6840711567
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | task id: 46676269
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | errors: (none)
[2025-10-13 04:49:33] 2025-10-13 08:48:26,242 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | pilot state: finished 
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | transexitcode: 0
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | exeerrorcode: 0
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | exeerrordiag: 
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | exitcode: 0
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | exitmsg: OK
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | cpuconsumptiontime: 52166 s
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | nevents: 400
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | neventsw: 0
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | pid: 789071
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | pgrp: 789071
[2025-10-13 04:49:33] 2025-10-13 08:48:26,243 | INFO     | corecount: 8
[2025-10-13 04:49:33] 2025-10-13 08:48:26,244 | INFO     | event service: False
[2025-10-13 04:49:33] 2025-10-13 08:48:26,244 | INFO     | sizes: {0: 2347979, 1: 2348664, 2: 2348664, 3: 2348891, 15: 2348891, 26: 2348919, 30: 2349337, 37: 2349365, 31870: 2387858, 31877: 2396856, 31878: 2396912, 31913: 
[2025-10-13 04:49:33] 2025-10-13 08:48:26,244 | INFO     | --------------------------------------------------
[2025-10-13 04:49:33] 2025-10-13 08:48:26,286 | INFO     | 
[2025-10-13 04:49:33] 2025-10-13 08:48:26,286 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 04:49:33] 2025-10-13 08:48:26,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:49:33] 2025-10-13 08:48:26,419 | INFO     | job 6840711567 has completed (purged errors)
[2025-10-13 04:49:33] 2025-10-13 08:48:26,420 | INFO     | overall cleanup function is called
[2025-10-13 04:49:33] 2025-10-13 08:48:26,677 | INFO     | PID=780055 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 04:49:33] 2025-10-13 08:48:26,678 | INFO     | .. there are 18 such processes running
[2025-10-13 04:49:33] 2025-10-13 08:48:27,433 | INFO     | --- collectZombieJob: --- 10, [789071]
[2025-10-13 04:49:33] 2025-10-13 08:48:27,433 | INFO     | zombie collector waiting for pid 789071
[2025-10-13 04:49:33] 2025-10-13 08:48:27,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:49:33] 2025-10-13 08:48:27,433 | INFO     | collected zombie processes
[2025-10-13 04:49:33] 2025-10-13 08:48:27,433 | INFO     | will attempt to kill all subprocesses of pid=789071
[2025-10-13 04:49:33] 2025-10-13 08:48:29,288 | INFO     | process IDs to be killed: [789071] (in reverse order)
[2025-10-13 04:49:33] 2025-10-13 08:48:29,537 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:49:33] 2025-10-13 08:48:29,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:49:33] 2025-10-13 08:48:29,571 | INFO     | did not find any defunct processes belonging to 789071
[2025-10-13 04:49:33] 2025-10-13 08:48:29,602 | INFO     | did not find any defunct processes belonging to 789071
[2025-10-13 04:49:33] 2025-10-13 08:48:29,602 | INFO     | ready for new job
[2025-10-13 04:49:33] 2025-10-13 08:48:29,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:49:33] 2025-10-13 08:48:29,610 | INFO     | ***************************************
[2025-10-13 04:49:33] 2025-10-13 08:48:29,611 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:49:33] 2025-10-13 08:48:29,611 | INFO     | ***************************************
[2025-10-13 04:49:33] 2025-10-13 08:48:29,611 | INFO     | 
[2025-10-13 04:49:33] 2025-10-13 08:48:29,621 | INFO     | architecture information:
[2025-10-13 04:49:33] 2025-10-13 08:48:29,622 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:49:33] 2025-10-13 08:48:29,727 | INFO     | cat /etc/os-release:
[2025-10-13 04:49:33] NAME="CentOS Linux"
[2025-10-13 04:49:33] VERSION="7 (Core)"
[2025-10-13 04:49:33] ID="centos"
[2025-10-13 04:49:33] ID_LIKE="rhel fedora"
[2025-10-13 04:49:33] VERSION_ID="7"
[2025-10-13 04:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:49:33] ANSI_COLOR="0;31"
[2025-10-13 04:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:49:33] HOME_URL="https://www.centos.org/"
[2025-10-13 04:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:49:33] 
[2025-10-13 04:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:49:33] 
[2025-10-13 04:49:33] 2025-10-13 08:48:29,728 | INFO     | ***************************************
[2025-10-13 04:49:33] 2025-10-13 08:48:30,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 04:49:33] 2025-10-13 08:48:30,293 | INFO     | sufficient remaining disk space (126808489984 B)
[2025-10-13 04:49:33] 2025-10-13 08:48:30,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:49:33] 2025-10-13 08:48:30,293 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:49:33] 2025-10-13 08:48:30,293 | INFO     | update_server=False
[2025-10-13 04:49:33] 2025-10-13 08:48:30,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:49:33] 2025-10-13 08:48:30,380 | INFO     | all data control threads have been joined
[2025-10-13 04:49:33] 2025-10-13 08:48:30,671 | INFO     | all payload control threads have been joined
[2025-10-13 04:49:33] 2025-10-13 08:48:30,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:49:33] 2025-10-13 08:48:30,766 | INFO     | aborting loop
[2025-10-13 04:49:33] 2025-10-13 08:48:30,989 | INFO     | all job control threads have been joined
[2025-10-13 04:49:33] 2025-10-13 08:48:31,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:49:33] 2025-10-13 08:48:31,308 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,400 | INFO     | [data] control thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,400 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,458 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:49:33] 2025-10-13 08:48:31,677 | INFO     | [payload] control thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,772 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,823 | INFO     | [job] validate thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:31,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:32,002 | INFO     | [job] control thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:32,009 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:32,313 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:32,334 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:32,803 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:33,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:49:33] 2025-10-13 08:48:33,470 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:37,102 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:49:33] 2025-10-13 08:48:59,797 | INFO     | PID=780055 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 04:49:33] 2025-10-13 08:48:59,799 | INFO     | .. there are 18 such processes running
[2025-10-13 04:49:33] 2025-10-13 08:48:59,800 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:49:33] 2025-10-13 08:48:59,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:49:33] 2025-10-13 08:48:59,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:49:33] 2025-10-13 08:49:24,941 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:49:33] 2025-10-13 08:49:26,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550449538880)>', '<ExcThread(monitor, started 140549952616192)>']
[2025-10-13 04:49:33] 2025-10-13 08:49:26,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:49:33] 2025-10-13 08:49:26,978 | INFO     | [monitor] control thread has ended
[2025-10-13 04:49:33] 2025-10-13 08:49:31,164 | INFO     | all workflow threads have been joined
[2025-10-13 04:49:33] 2025-10-13 08:49:31,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:49:33] 2025-10-13 08:49:31,164 | INFO     | traces error code: 0
[2025-10-13 04:49:33] 2025-10-13 08:49:31,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:49:33] 2025-10-13 08:49:31,786 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:49:33] 2025-10-13 08:49:31,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:49:33] 2025-10-13 08:49:31,854 [wrapper] pilotpid: 780055
[2025-10-13 04:49:33] 2025-10-13 08:49:31,882 [wrapper] Pilot exit status: 0
[2025-10-13 04:49:33] 2025-10-13 08:49:32,010 [wrapper] pandaids: 6840711567
[2025-10-13 04:49:33] 2025-10-13 08:49:32,092 [wrapper] cleanup supervisor_pilot 1800336 780056
[2025-10-13 04:49:33] 2025-10-13 08:49:32,098 [wrapper] Test setup, not cleaning
[2025-10-13 04:49:33] 2025-10-13 08:49:32,118 [wrapper] apfmon messages muted
[2025-10-13 04:49:33] 2025-10-13 08:49:32,151 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:49:33] 2025-10-13 08:49:32,175 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:49:33]  *** Error codes and diagnostics ***
[2025-10-13 04:49:33]     "exeErrorCode": 0,
[2025-10-13 04:49:33]     "exeErrorDiag": "",
[2025-10-13 04:49:33]     "pilotErrorCode": 0,
[2025-10-13 04:49:33]     "pilotErrorDiag": "",
[2025-10-13 04:49:33]  *** Listing of results directory ***
[2025-10-13 04:49:33] total 419408
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 04:49:33] -rwx------. 1 boincer umatlas     36292 Oct 12 15:11 runpilot2-wrapper.sh
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:11 queuedata.json
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:49:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:54 run_atlas
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:54 job.xml
[2025-10-13 04:49:33] -rw-r--r--. 2 boincer umatlas 222343948 Oct 12 19:54 EVNT.46676267._002024.pool.root.1
[2025-10-13 04:49:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:54 start_atlas.sh
[2025-10-13 04:49:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:54 shared
[2025-10-13 04:49:33] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:54 input.tar.gz
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:54 boinc_lockfile
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 19:54 pandaJob.out
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas    975603 Oct 12 19:55 agis_schedconf.cvmfs.json
[2025-10-13 04:49:33] drwx------. 5 boincer umatlas      4096 Oct 12 19:55 pilot3
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas 193595727 Oct 13 04:45 HITS.46676269._087135.pool.root.1
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas       531 Oct 13 04:45 boinc_task_state.xml
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas      6859 Oct 13 04:46 init_data.xml
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas      1044 Oct 13 04:47 memory_monitor_summary.json
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas    699764 Oct 13 04:47 log.46676269._087135.job.log.tgz.1
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas      7835 Oct 13 04:48 heartbeat.json
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas        95 Oct 13 04:48 pilot_heartbeat.json
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas      4824 Oct 13 04:49 pilotlog.txt
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas   4118880 Oct 13 04:49 log.46676269._087135.job.log.1
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas        28 Oct 13 04:49 wrapper_checkpoint.txt
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas       357 Oct 13 04:49 output.list
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:49 boinc_mmap_file
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:49 runtime_log
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas   4833280 Oct 13 04:49 result.tar.gz
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 04:49 runtime_log.err
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas       660 Oct 13 04:49 7yCMDmKeGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6ElNDm0ZoVOm.diag
[2025-10-13 04:49:33] -rw-r--r--. 1 boincer umatlas     21122 Oct 13 04:49 stderr.txt
[2025-10-13 04:49:33] HITS file was successfully produced:
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas 193595727 Oct 13 04:45 shared/HITS.pool.root.1
[2025-10-13 04:49:33]  *** Contents of shared directory: ***
[2025-10-13 04:49:33] total 411496
[2025-10-13 04:49:33] -rw-r--r--. 2 boincer umatlas 222343948 Oct 12 19:54 ATLAS.root_0
[2025-10-13 04:49:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:54 start_atlas.sh
[2025-10-13 04:49:33] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:54 input.tar.gz
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas 193595727 Oct 13 04:45 HITS.pool.root.1
[2025-10-13 04:49:33] -rw-------. 1 boincer umatlas   4833280 Oct 13 04:49 result.tar.gz
04:49:34 (775322): run_atlas exited; CPU time 53502.955068
04:49:34 (775322): called boinc_finish(0)

</stderr_txt>
]]>

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