Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
07:59:50 (2069602): wrapper (7.7.26015): starting
07:59:50 (2069602): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 07:59:50] Arguments: --nthreads 12
[2025-10-13 07:59:50] Threads: 12
[2025-10-13 07:59:50] Checking for CVMFS
[2025-10-13 07:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:59:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:59:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:59:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:59:50] 2.12.7.0 2061225 3312 84736 151660 0 185 2476677 4194305 917 130560 0 9396153 99.997 118062 2398 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2025-10-13 07:59:50] CVMFS is ok
[2025-10-13 07:59:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:59:50] Checking for apptainer binary...
[2025-10-13 07:59:50] apptainer is not installed, using version from CVMFS
[2025-10-13 07:59:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:59:51] Trebeth
[2025-10-13 07:59:51] apptainer works
[2025-10-13 07:59:51] Set ATHENA_PROC_NUMBER=12
[2025-10-13 07:59:51] Set ATHENA_CORE_NUMBER=12
[2025-10-13 07:59:51] Starting ATLAS job with PandaID=6840390959
[2025-10-13 07:59:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:41:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:41:28] 2025-10-13 12:40:45,071 | INFO     | transferring file log.46676269._083731.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6840390959/log.46676269._083731.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 08:41:28] 2025-10-13 12:40:45,071 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6840390959/log.46676269._083731.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-13 08:41:28] 2025-10-13 12:40:45,085 | INFO     | adding to output.list: log.46676269._083731.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/46/log.46676269._083731.job.log.tg
[2025-10-13 08:41:28] 2025-10-13 12:40:45,086 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:41:28] 2025-10-13 12:40:45,086 | INFO     | summary of transferred files:
[2025-10-13 08:41:28] 2025-10-13 12:40:45,086 | INFO     |  -- lfn=log.46676269._083731.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:41:28] 2025-10-13 12:40:45,086 | INFO     | stage-out finished correctly
[2025-10-13 08:41:28] 2025-10-13 12:40:45,866 | INFO     | monitor loop #188: job 0:6840390959 is in state 'finished'
[2025-10-13 08:41:28] 2025-10-13 12:40:45,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:41:28] 2025-10-13 12:40:46,842 | INFO     | time since job start (2445s) is within the limit (172800.0s)
[2025-10-13 08:41:28] 2025-10-13 12:40:48,070 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:41:28] 2025-10-13 12:40:48,370 | INFO     | monitor loop #189: job 0:6840390959 is in state 'finished'
[2025-10-13 08:41:28] 2025-10-13 12:40:48,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:41:28] 2025-10-13 12:40:48,848 | INFO     | time since job start (2447s) is within the limit (172800.0s)
[2025-10-13 08:41:28] 2025-10-13 12:40:50,010 | INFO     | PID=2073630 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:41:28] 2025-10-13 12:40:50,011 | INFO     | .. there are 2 such processes running
[2025-10-13 08:41:28] 2025-10-13 12:40:50,636 | INFO     | job 6840390959 has state=finished
[2025-10-13 08:41:28] 2025-10-13 12:40:50,636 | INFO     | preparing for final server update for job 6840390959 in state='finished'
[2025-10-13 08:41:28] 2025-10-13 12:40:50,637 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:41:28] 2025-10-13 12:40:50,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:41:28] 2025-10-13 12:40:50,637 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:41:28] 2025-10-13 12:40:50,637 | INFO     | job 6840390959 has finished - writing final server update
[2025-10-13 08:41:28] 2025-10-13 12:40:50,638 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:41:28] 2025-10-13 12:40:50,640 | INFO     | executing command: lscpu
[2025-10-13 08:41:28] 2025-10-13 12:40:50,693 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:41:28] 2025-10-13 12:40:50,874 | INFO     | monitor loop #190: job 0:6840390959 is in state 'finished'
[2025-10-13 08:41:28] 2025-10-13 12:40:50,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:41:28] 2025-10-13 12:40:51,011 | INFO     | time since job start (2450s) is within the limit (172800.0s)
[2025-10-13 08:41:28] 2025-10-13 12:40:53,017 | INFO     | time since job start (2452s) is within the limit (172800.0s)
[2025-10-13 08:41:28] 2025-10-13 12:40:53,377 | INFO     | monitor loop #191: job 0:6840390959 is in state 'finished'
[2025-10-13 08:41:28] 2025-10-13 12:40:53,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:41:28] 2025-10-13 12:40:55,019 | INFO     | time since job start (2454s) is within the limit (172800.0s)
[2025-10-13 08:41:28] 2025-10-13 12:40:55,881 | INFO     | monitor loop #192: job 0:6840390959 is in state 'finished'
[2025-10-13 08:41:28] 2025-10-13 12:40:55,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,233 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:41:28] 2025-10-13 12:40:56,258 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 1689.1994285714284
[2025-10-13 08:41:28] 2025-10-13 12:40:56,284 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6840390959/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,285 | INFO     | extracted standard info from prmon json
[2025-10-13 08:41:28] 2025-10-13 12:40:56,285 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:41:28] 2025-10-13 12:40:56,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:41:28] 2025-10-13 12:40:56,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:41:28] 2025-10-13 12:40:56,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | sum of square deviations: 11133232.0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | sum of deviations: -838132131.0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | mean x: 1760358105.0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | mean y: 2735552.1515151514
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | -- intersect: 132526039644.50957
[2025-10-13 08:41:28] 2025-10-13 12:40:56,287 | INFO     | intersect: 132526039644.50957
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | chi2: 0.026220197710043667
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | -- intersect: 132526039644.50957
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | current memory leak: -75.28 B/s (using 33 data points, chi2=0.03)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | could have reported an average CPU frequency of 1755 MHz (5 samples)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | ..............................
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | . Timing measurements:
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | . get job = 0 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,288 | INFO     | . initial setup = 2 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,289 | INFO     | . payload setup = 4 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,289 | INFO     | . stage-in = 0 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,289 | INFO     | . payload execution = 2420 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,289 | INFO     | . stage-out = 0 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,289 | INFO     | . log creation = 0 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,289 | INFO     | ..............................
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | 
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | job summary report
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | --------------------------------------------------
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | PanDA job id: 6840390959
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | task id: 46676269
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | errors: (none)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | pilot state: finished 
[2025-10-13 08:41:28] 2025-10-13 12:40:56,440 | INFO     | transexitcode: 0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | exeerrorcode: 0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | exeerrordiag: 
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | exitcode: 0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | exitmsg: OK
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | cpuconsumptiontime: 23825 s
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | nevents: 400
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | neventsw: 0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | pid: 2080576
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | pgrp: 2080576
[2025-10-13 08:41:28] 2025-10-13 12:40:56,441 | INFO     | corecount: 12
[2025-10-13 08:41:28] 2025-10-13 12:40:56,442 | INFO     | event service: False
[2025-10-13 08:41:28] 2025-10-13 12:40:56,442 | INFO     | sizes: {0: 2348864, 4: 2349126, 11: 2349154, 2429: 2374310, 2430: 2383322, 2433: 2383378, 2441: 2383732}
[2025-10-13 08:41:28] 2025-10-13 12:40:56,442 | INFO     | --------------------------------------------------
[2025-10-13 08:41:28] 2025-10-13 12:40:56,442 | INFO     | 
[2025-10-13 08:41:28] 2025-10-13 12:40:56,442 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,463 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:41:28] 2025-10-13 12:40:56,463 | INFO     | job 6840390959 has completed (purged errors)
[2025-10-13 08:41:28] 2025-10-13 12:40:56,463 | INFO     | overall cleanup function is called
[2025-10-13 08:41:28] 2025-10-13 12:40:57,471 | INFO     | --- collectZombieJob: --- 10, [2080576]
[2025-10-13 08:41:28] 2025-10-13 12:40:57,471 | INFO     | zombie collector waiting for pid 2080576
[2025-10-13 08:41:28] 2025-10-13 12:40:57,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:41:28] 2025-10-13 12:40:57,471 | INFO     | collected zombie processes
[2025-10-13 08:41:28] 2025-10-13 12:40:57,471 | INFO     | will attempt to kill all subprocesses of pid=2080576
[2025-10-13 08:41:28] 2025-10-13 12:40:57,676 | INFO     | process IDs to be killed: [2080576] (in reverse order)
[2025-10-13 08:41:28] 2025-10-13 12:40:57,729 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:41:28] 2025-10-13 12:40:57,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:41:28] 2025-10-13 12:40:57,734 | INFO     | did not find any defunct processes belonging to 2080576
[2025-10-13 08:41:28] 2025-10-13 12:40:57,739 | INFO     | did not find any defunct processes belonging to 2080576
[2025-10-13 08:41:28] 2025-10-13 12:40:57,739 | INFO     | ready for new job
[2025-10-13 08:41:28] 2025-10-13 12:40:57,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:41:28] 2025-10-13 12:40:57,741 | INFO     | ***************************************
[2025-10-13 08:41:28] 2025-10-13 12:40:57,741 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:41:28] 2025-10-13 12:40:57,741 | INFO     | ***************************************
[2025-10-13 08:41:28] 2025-10-13 12:40:57,741 | INFO     | 
[2025-10-13 08:41:28] 2025-10-13 12:40:57,761 | INFO     | architecture information:
[2025-10-13 08:41:28] 2025-10-13 12:40:57,761 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:41:28] 2025-10-13 12:40:57,775 | INFO     | cat /etc/os-release:
[2025-10-13 08:41:28] NAME="CentOS Linux"
[2025-10-13 08:41:28] VERSION="7 (Core)"
[2025-10-13 08:41:28] ID="centos"
[2025-10-13 08:41:28] ID_LIKE="rhel fedora"
[2025-10-13 08:41:28] VERSION_ID="7"
[2025-10-13 08:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:41:28] ANSI_COLOR="0;31"
[2025-10-13 08:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:41:28] HOME_URL="https://www.centos.org/"
[2025-10-13 08:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:41:28] 
[2025-10-13 08:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:41:28] 
[2025-10-13 08:41:28] 2025-10-13 12:40:57,775 | INFO     | ***************************************
[2025-10-13 08:41:28] 2025-10-13 12:40:58,278 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-13 08:41:28] 2025-10-13 12:40:58,293 | INFO     | sufficient remaining disk space (403679739904 B)
[2025-10-13 08:41:28] 2025-10-13 12:40:58,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:41:28] 2025-10-13 12:40:58,293 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:41:28] 2025-10-13 12:40:58,293 | INFO     | update_server=False
[2025-10-13 08:41:28] 2025-10-13 12:40:58,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:41:28] 2025-10-13 12:40:58,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:41:28] 2025-10-13 12:40:58,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:41:28] 2025-10-13 12:40:58,384 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:41:28] 2025-10-13 12:40:58,384 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:41:28] 2025-10-13 12:40:58,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:41:28] 2025-10-13 12:40:58,385 | INFO     | will abort loop
[2025-10-13 08:41:28] 2025-10-13 12:40:58,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:41:28] 2025-10-13 12:40:58,695 | INFO     | all job control threads have been joined
[2025-10-13 08:41:28] 2025-10-13 12:40:59,278 | INFO     | all data control threads have been joined
[2025-10-13 08:41:28] 2025-10-13 12:40:59,299 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:40:59,300 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:40:59,390 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:40:59,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:40:59,632 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:40:59,700 | INFO     | [job] control thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:40:59,776 | INFO     | all payload control threads have been joined
[2025-10-13 08:41:28] 2025-10-13 12:40:59,840 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,201 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,283 | INFO     | [data] control thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,300 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,452 | INFO     | [job] validate thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,637 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,695 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,713 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:00,781 | INFO     | [payload] control thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:02,666 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:41:28] 2025-10-13 12:41:04,299 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:41:28] 2025-10-13 12:41:06,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646555952960)>', '<ExcThread(monitor, started 139646256260864)>']
[2025-10-13 08:41:28] 2025-10-13 12:41:11,314 | INFO     | all workflow threads have been joined
[2025-10-13 08:41:28] 2025-10-13 12:41:11,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:41:28] 2025-10-13 12:41:11,315 | INFO     | traces error code: 0
[2025-10-13 08:41:28] 2025-10-13 12:41:11,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:41:28] 2025-10-13 12:41:28,265 | INFO     | PID=2073630 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:41:28] 2025-10-13 12:41:28,265 | INFO     | .. there are 2 such processes running
[2025-10-13 08:41:28] 2025-10-13 12:41:28,266 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:41:28] 2025-10-13 12:41:28,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:41:28] 2025-10-13 12:41:28,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:41:28] 2025-10-13 12:41:28,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:41:28] 2025-10-13 12:41:28,266 | INFO     | [monitor] control thread has ended
[2025-10-13 08:41:28] 2025-10-13 12:41:28,351 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:41:28] 2025-10-13 12:41:28,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:41:28] 2025-10-13 12:41:28,356 [wrapper] pilotpid: 2073630
[2025-10-13 08:41:28] 2025-10-13 12:41:28,359 [wrapper] Pilot exit status: 0
[2025-10-13 08:41:28] 2025-10-13 12:41:28,367 [wrapper] pandaids: 6840390959
[2025-10-13 08:41:28] 2025-10-13 12:41:28,401 [wrapper] cleanup supervisor_pilot 2113181 2073631
[2025-10-13 08:41:28] 2025-10-13 12:41:28,404 [wrapper] Test setup, not cleaning
[2025-10-13 08:41:28] 2025-10-13 12:41:28,407 [wrapper] apfmon messages muted
[2025-10-13 08:41:28] 2025-10-13 12:41:28,409 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:41:28] 2025-10-13 12:41:28,410 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:41:28]  *** Error codes and diagnostics ***
[2025-10-13 08:41:28]     "exeErrorCode": 0,
[2025-10-13 08:41:28]     "exeErrorDiag": "",
[2025-10-13 08:41:28]     "pilotErrorCode": 0,
[2025-10-13 08:41:28]     "pilotErrorDiag": "",
[2025-10-13 08:41:28]  *** Listing of results directory ***
[2025-10-13 08:41:28] total 408748
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:37 queuedata.json
[2025-10-13 08:41:28] -rwx------ 1 boinc boinc     36292 Oct 12 12:38 runpilot2-wrapper.sh
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:41:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:59 run_atlas
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:59 job.xml
[2025-10-13 08:41:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:59 start_atlas.sh
[2025-10-13 08:41:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:59 shared
[2025-10-13 08:41:28] -rw-r--r-- 2 boinc boinc    569679 Oct 13 07:59 input.tar.gz
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc      7601 Oct 13 07:59 init_data.xml
[2025-10-13 08:41:28] -rw-r--r-- 2 boinc boinc 222089107 Oct 13 07:59 EVNT.46676267._004751.pool.root.1
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:59 boinc_lockfile
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:59 pandaJob.out
[2025-10-13 08:41:28] -rw------- 1 boinc boinc    972497 Oct 13 07:59 agis_schedconf.cvmfs.json
[2025-10-13 08:41:28] -rw------- 1 boinc boinc   1560580 Oct 13 08:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:41:28] drwx------ 5 boinc boinc      4096 Oct 13 08:00 pilot3
[2025-10-13 08:41:28] -rw------- 1 boinc boinc 191050521 Oct 13 08:40 HITS.46676269._083731.pool.root.1
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:40 boinc_task_state.xml
[2025-10-13 08:41:28] -rw------- 1 boinc boinc      1026 Oct 13 08:40 memory_monitor_summary.json
[2025-10-13 08:41:28] -rw------- 1 boinc boinc    367488 Oct 13 08:40 log.46676269._083731.job.log.tgz.1
[2025-10-13 08:41:28] -rw------- 1 boinc boinc      7780 Oct 13 08:40 heartbeat.json
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:41 boinc_mmap_file
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:41 wrapper_checkpoint.txt
[2025-10-13 08:41:28] -rw------- 1 boinc boinc       822 Oct 13 08:41 pilotlog.txt
[2025-10-13 08:41:28] -rw------- 1 boinc boinc        95 Oct 13 08:41 pilot_heartbeat.json
[2025-10-13 08:41:28] -rw------- 1 boinc boinc    393545 Oct 13 08:41 log.46676269._083731.job.log.1
[2025-10-13 08:41:28] -rw------- 1 boinc boinc       357 Oct 13 08:41 output.list
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:41 runtime_log
[2025-10-13 08:41:28] -rw------- 1 boinc boinc    778240 Oct 13 08:41 result.tar.gz
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc      8772 Oct 13 08:41 runtime_log.err
[2025-10-13 08:41:28] -rw------- 1 boinc boinc       647 Oct 13 08:41 pANLDmRGES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAhkNDmMJS8nn.diag
[2025-10-13 08:41:28] -rw-r--r-- 1 boinc boinc     22267 Oct 13 08:41 stderr.txt
[2025-10-13 08:41:28] HITS file was successfully produced:
[2025-10-13 08:41:28] -rw------- 1 boinc boinc 191050521 Oct 13 08:40 shared/HITS.pool.root.1
[2025-10-13 08:41:28]  *** Contents of shared directory: ***
[2025-10-13 08:41:28] total 404804
[2025-10-13 08:41:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:59 start_atlas.sh
[2025-10-13 08:41:28] -rw-r--r-- 2 boinc boinc    569679 Oct 13 07:59 input.tar.gz
[2025-10-13 08:41:28] -rw-r--r-- 2 boinc boinc 222089107 Oct 13 07:59 ATLAS.root_0
[2025-10-13 08:41:28] -rw------- 1 boinc boinc 191050521 Oct 13 08:40 HITS.pool.root.1
[2025-10-13 08:41:28] -rw------- 1 boinc boinc    778240 Oct 13 08:41 result.tar.gz
08:41:29 (2069602): run_atlas exited; CPU time 23863.529277
08:41:29 (2069602): called boinc_finish(0)

</stderr_txt>
]]>

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