Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:05 (2341851): wrapper (7.7.26015): starting
20:56:05 (2341851): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:56:05] Arguments: --nthreads 8
[2025-10-12 20:56:05] Threads: 8
[2025-10-12 20:56:05] Checking for CVMFS
[2025-10-12 20:56:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:56:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:56:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:56:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:56:08] 2.13.2.0 5698 6228 216032 151642 2 512 19450175 32935937 21920 16776704 0 16119538 99.656 13230565 27023 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:56:08] CVMFS is ok
[2025-10-12 20:56:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:56:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:56:08] Further information can be found at the LHC@home message board.
[2025-10-12 20:56:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:56:08] Checking for apptainer binary...
[2025-10-12 20:56:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:56:08] Running /usr/bin/apptainer --version
[2025-10-12 20:56:08] apptainer version 1.4.3-1.el9
[2025-10-12 20:56:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:56:09] c-6-4.aglt2.org
[2025-10-12 20:56:09] apptainer works
[2025-10-12 20:56:09] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:56:09] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:56:09] Starting ATLAS job with PandaID=6840538045
[2025-10-12 20:56:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:56:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:56:58] 2025-10-13 09:55:43,621 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.176075000002
[2025-10-13 05:56:58] 2025-10-13 09:55:43,689 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840538045/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:56:58] 2025-10-13 09:55:43,740 | INFO     | extracted standard info from prmon json
[2025-10-13 05:56:58] 2025-10-13 09:55:43,740 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:56:58] 2025-10-13 09:55:43,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:56:58] 2025-10-13 09:55:43,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:56:58] 2025-10-13 09:55:43,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:56:58] 2025-10-13 09:55:43,870 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:56:58] 2025-10-13 09:55:43,897 | INFO     | sum of square deviations: 44870781131.16942
[2025-10-13 05:56:58] 2025-10-13 09:55:43,947 | INFO     | sum of deviations: 222261167850.72195
[2025-10-13 05:56:58] 2025-10-13 09:55:44,006 | INFO     | mean x: 1760333247.8209524
[2025-10-13 05:56:58] 2025-10-13 09:55:44,006 | INFO     | mean y: 2072287.3161904763
[2025-10-13 05:56:58] 2025-10-13 09:55:44,006 | INFO     | -- intersect: -8717493398.946299
[2025-10-13 05:56:58] 2025-10-13 09:55:44,006 | INFO     | intersect: -8717493398.946299
[2025-10-13 05:56:58] 2025-10-13 09:55:44,007 | INFO     | chi2: 5.8552971855467755
[2025-10-13 05:56:58] 2025-10-13 09:55:44,008 | INFO     | sum of square deviations: 43601052342.422935
[2025-10-13 05:56:58] 2025-10-13 09:55:44,090 | INFO     | sum of deviations: 278166745471.654
[2025-10-13 05:56:58] 2025-10-13 09:55:44,141 | INFO     | mean x: 1760333095.3269231
[2025-10-13 05:56:58] 2025-10-13 09:55:44,141 | INFO     | mean y: 2078966.696153846
[2025-10-13 05:56:58] 2025-10-13 09:55:44,141 | INFO     | -- intersect: -11228524465.246655
[2025-10-13 05:56:58] 2025-10-13 09:55:44,141 | INFO     | intersect: -11228524465.246655
[2025-10-13 05:56:58] 2025-10-13 09:55:44,142 | INFO     | chi2: 4.504762107729368
[2025-10-13 05:56:58] 2025-10-13 09:55:44,142 | INFO     | current chi2=4.504762107729368 (change=23.065184140457813 %)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,142 | INFO     | right removable region: 519
[2025-10-13 05:56:58] 2025-10-13 09:55:44,143 | INFO     | sum of square deviations: 43600821212.76729
[2025-10-13 05:56:58] 2025-10-13 09:55:44,300 | INFO     | sum of deviations: 103588080043.04799
[2025-10-13 05:56:58] 2025-10-13 09:55:44,300 | INFO     | mean x: 1760333400.3288462
[2025-10-13 05:56:58] 2025-10-13 09:55:44,300 | INFO     | mean y: 2086522.1634615385
[2025-10-13 05:56:58] 2025-10-13 09:55:44,300 | INFO     | -- intersect: -4180163997.519855
[2025-10-13 05:56:58] 2025-10-13 09:55:44,301 | INFO     | intersect: -4180163997.519855
[2025-10-13 05:56:58] 2025-10-13 09:55:44,301 | INFO     | chi2: 3.115859101086146
[2025-10-13 05:56:58] 2025-10-13 09:55:44,302 | INFO     | current chi2=3.115859101086146 (change=46.78563696515119 %)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,302 | INFO     | sum of square deviations: 42355111113.63876
[2025-10-13 05:56:58] 2025-10-13 09:55:44,411 | INFO     | sum of deviations: 48350642834.825165
[2025-10-13 05:56:58] 2025-10-13 09:55:44,412 | INFO     | mean x: 1760333552.8330097
[2025-10-13 05:56:58] 2025-10-13 09:55:44,412 | INFO     | mean y: 2093272.9514563107
[2025-10-13 05:56:58] 2025-10-13 09:55:44,412 | INFO     | -- intersect: -2007422382.7820113
[2025-10-13 05:56:58] 2025-10-13 09:55:44,412 | INFO     | intersect: -2007422382.7820113
[2025-10-13 05:56:58] 2025-10-13 09:55:44,413 | INFO     | chi2: 2.502320023433737
[2025-10-13 05:56:58] 2025-10-13 09:55:44,413 | INFO     | current chi2=2.502320023433737 (change=19.690847941055416 %)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,413 | INFO     | left removable region: 20
[2025-10-13 05:56:58] 2025-10-13 09:55:44,470 | INFO     | monitor loop #1669: job 0:6840538045 is in state 'finished'
[2025-10-13 05:56:58] 2025-10-13 09:55:44,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,471 | INFO     | time since job start (32279s) is within the limit (172800.0s)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,478 | INFO     | sum of square deviations: 38528838037.02606
[2025-10-13 05:56:58] 2025-10-13 09:55:44,559 | INFO     | sum of deviations: 48537231160.92587
[2025-10-13 05:56:58] 2025-10-13 09:55:44,559 | INFO     | mean x: 1760333674.8517034
[2025-10-13 05:56:58] 2025-10-13 09:55:44,559 | INFO     | mean y: 2107563.498997996
[2025-10-13 05:56:58] 2025-10-13 09:55:44,559 | INFO     | -- intersect: -2215496881.6319475
[2025-10-13 05:56:58] 2025-10-13 09:55:44,560 | INFO     | intersect: -2215496881.6319475
[2025-10-13 05:56:58] 2025-10-13 09:55:44,560 | INFO     | chi2: 0.7771962860823565
[2025-10-13 05:56:58] 2025-10-13 09:55:44,591 | INFO     | -- intersect: -2215496881.6319475
[2025-10-13 05:56:58] 2025-10-13 09:55:44,591 | INFO     | current memory leak: 1.26 B/s (using 499 data points, chi2=0.78)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | ..............................
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | . Timing measurements:
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | . get job = 0 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | . initial setup = 7 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | . payload setup = 55 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,592 | INFO     | . stage-in = 1 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,593 | INFO     | . payload execution = 32031 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,593 | INFO     | . stage-out = 20 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,593 | INFO     | . log creation = 2 s
[2025-10-13 05:56:58] 2025-10-13 09:55:44,593 | INFO     | ..............................
[2025-10-13 05:56:58] 2025-10-13 09:55:46,203 | INFO     | 
[2025-10-13 05:56:58] 2025-10-13 09:55:46,203 | INFO     | job summary report
[2025-10-13 05:56:58] 2025-10-13 09:55:46,203 | INFO     | --------------------------------------------------
[2025-10-13 05:56:58] 2025-10-13 09:55:46,203 | INFO     | PanDA job id: 6840538045
[2025-10-13 05:56:58] 2025-10-13 09:55:46,203 | INFO     | task id: 46676269
[2025-10-13 05:56:58] 2025-10-13 09:55:46,203 | INFO     | errors: (none)
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | pilot state: finished 
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | transexitcode: 0
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | exeerrorcode: 0
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | exeerrordiag: 
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | exitcode: 0
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | exitmsg: OK
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | cpuconsumptiontime: 47637 s
[2025-10-13 05:56:58] 2025-10-13 09:55:46,204 | INFO     | nevents: 400
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | neventsw: 0
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | pid: 2386512
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | pgrp: 2386512
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | corecount: 8
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | event service: False
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 3: 2348913, 14: 2348941, 26: 2348969, 37: 2349125, 49: 2349443, 60: 2349443, 32094: 2387597, 32097: 2387596, 32119: 239
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | --------------------------------------------------
[2025-10-13 05:56:58] 2025-10-13 09:55:46,205 | INFO     | 
[2025-10-13 05:56:58] 2025-10-13 09:55:46,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 05:56:58] 2025-10-13 09:55:46,526 | INFO     | time since job start (32281s) is within the limit (172800.0s)
[2025-10-13 05:56:58] 2025-10-13 09:55:46,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:56:58] 2025-10-13 09:55:46,566 | INFO     | job 6840538045 has completed (purged errors)
[2025-10-13 05:56:58] 2025-10-13 09:55:46,567 | INFO     | overall cleanup function is called
[2025-10-13 05:56:58] 2025-10-13 09:55:47,619 | INFO     | --- collectZombieJob: --- 10, [2386512]
[2025-10-13 05:56:58] 2025-10-13 09:55:47,620 | INFO     | zombie collector waiting for pid 2386512
[2025-10-13 05:56:58] 2025-10-13 09:55:47,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:56:58] 2025-10-13 09:55:47,621 | INFO     | collected zombie processes
[2025-10-13 05:56:58] 2025-10-13 09:55:47,621 | INFO     | will attempt to kill all subprocesses of pid=2386512
[2025-10-13 05:56:58] 2025-10-13 09:55:53,156 | INFO     | process IDs to be killed: [2386512] (in reverse order)
[2025-10-13 05:56:58] 2025-10-13 09:55:55,136 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:56:58] 2025-10-13 09:55:55,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:56:58] 2025-10-13 09:55:55,331 | INFO     | did not find any defunct processes belonging to 2386512
[2025-10-13 05:56:58] 2025-10-13 09:55:55,517 | INFO     | did not find any defunct processes belonging to 2386512
[2025-10-13 05:56:58] 2025-10-13 09:55:55,517 | INFO     | ready for new job
[2025-10-13 05:56:58] 2025-10-13 09:55:55,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:56:58] 2025-10-13 09:55:55,573 | INFO     | ***************************************
[2025-10-13 05:56:58] 2025-10-13 09:55:55,573 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:56:58] 2025-10-13 09:55:55,573 | INFO     | ***************************************
[2025-10-13 05:56:58] 2025-10-13 09:55:55,573 | INFO     | 
[2025-10-13 05:56:58] 2025-10-13 09:55:55,614 | INFO     | architecture information:
[2025-10-13 05:56:58] 2025-10-13 09:55:55,650 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:56:58] 2025-10-13 09:55:55,891 | INFO     | cat /etc/os-release:
[2025-10-13 05:56:58] NAME="CentOS Linux"
[2025-10-13 05:56:58] VERSION="7 (Core)"
[2025-10-13 05:56:58] ID="centos"
[2025-10-13 05:56:58] ID_LIKE="rhel fedora"
[2025-10-13 05:56:58] VERSION_ID="7"
[2025-10-13 05:56:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:56:58] ANSI_COLOR="0;31"
[2025-10-13 05:56:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:56:58] HOME_URL="https://www.centos.org/"
[2025-10-13 05:56:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:56:58] 
[2025-10-13 05:56:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:56:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:56:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:56:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:56:58] 
[2025-10-13 05:56:58] 2025-10-13 09:55:55,891 | INFO     | ***************************************
[2025-10-13 05:56:58] 2025-10-13 09:55:56,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 05:56:58] 2025-10-13 09:55:56,676 | INFO     | sufficient remaining disk space (75200724992 B)
[2025-10-13 05:56:58] 2025-10-13 09:55:56,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:56:58] 2025-10-13 09:55:56,677 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:56:58] 2025-10-13 09:55:56,677 | INFO     | update_server=False
[2025-10-13 05:56:58] 2025-10-13 09:55:56,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:56:58] 2025-10-13 09:55:56,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:56:58] 2025-10-13 09:55:56,703 | INFO     | aborting loop
[2025-10-13 05:56:58] 2025-10-13 09:55:56,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:56:58] 2025-10-13 09:55:56,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:56:58] 2025-10-13 09:55:56,816 | INFO     | all payload control threads have been joined
[2025-10-13 05:56:58] 2025-10-13 09:55:57,663 | INFO     | all data control threads have been joined
[2025-10-13 05:56:58] 2025-10-13 09:55:57,684 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:57,709 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:57,823 | INFO     | [payload] control thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:57,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,037 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,047 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,060 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,089 | INFO     | [job] validate thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,356 | INFO     | all job control threads have been joined
[2025-10-13 05:56:58] 2025-10-13 09:55:58,582 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,669 | INFO     | [data] control thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,731 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,734 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:58,989 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:55:59,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:56:58] 2025-10-13 09:55:59,363 | INFO     | [job] control thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:56:00,302 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:56:00,738 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:56:58] 2025-10-13 09:56:26,571 | INFO     | PID=2358451 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:56:58] 2025-10-13 09:56:26,615 | INFO     | .. there are 26 such processes running
[2025-10-13 05:56:58] 2025-10-13 09:56:26,615 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:56:58] 2025-10-13 09:56:26,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:56:58] 2025-10-13 09:56:26,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:56:58] 2025-10-13 09:56:48,252 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:56:58] 2025-10-13 09:56:48,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951727236928)>', '<ExcThread(monitor, started 139951106684672)>']
[2025-10-13 05:56:58] 2025-10-13 09:56:49,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:56:58] 2025-10-13 09:56:49,770 | INFO     | [monitor] control thread has ended
[2025-10-13 05:56:58] 2025-10-13 09:56:53,923 | INFO     | all workflow threads have been joined
[2025-10-13 05:56:58] 2025-10-13 09:56:53,924 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:56:58] 2025-10-13 09:56:53,924 | INFO     | traces error code: 0
[2025-10-13 05:56:58] 2025-10-13 09:56:53,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:56:58] 2025-10-13 09:56:56,202 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:56:58] 2025-10-13 09:56:56,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:56:58] 2025-10-13 09:56:56,335 [wrapper] pilotpid: 2358451
[2025-10-13 05:56:58] 2025-10-13 09:56:56,386 [wrapper] Pilot exit status: 0
[2025-10-13 05:56:58] 2025-10-13 09:56:56,632 [wrapper] pandaids: 6840538045
[2025-10-13 05:56:58] 2025-10-13 09:56:57,581 [wrapper] cleanup supervisor_pilot 3969479 2358452
[2025-10-13 05:56:58] 2025-10-13 09:56:57,635 [wrapper] Test setup, not cleaning
[2025-10-13 05:56:58] 2025-10-13 09:56:57,698 [wrapper] apfmon messages muted
[2025-10-13 05:56:58] 2025-10-13 09:56:57,761 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:56:58] 2025-10-13 09:56:57,818 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:56:58]  *** Error codes and diagnostics ***
[2025-10-13 05:56:58]     "exeErrorCode": 0,
[2025-10-13 05:56:58]     "exeErrorDiag": "",
[2025-10-13 05:56:58]     "pilotErrorCode": 0,
[2025-10-13 05:56:58]     "pilotErrorDiag": "",
[2025-10-13 05:56:58]  *** Listing of results directory ***
[2025-10-13 05:56:58] total 414092
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:02 queuedata.json
[2025-10-13 05:56:58] -rwx------. 1 boincer umatlas     36292 Oct 12 15:02 runpilot2-wrapper.sh
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:56:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:56 run_atlas
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:56 job.xml
[2025-10-13 05:56:58] -rw-r--r--. 2 boincer umatlas 221576191 Oct 12 20:56 EVNT.46676267._004436.pool.root.1
[2025-10-13 05:56:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:56 start_atlas.sh
[2025-10-13 05:56:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:56 shared
[2025-10-13 05:56:58] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 20:56 input.tar.gz
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:56 boinc_lockfile
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 20:56 pandaJob.out
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas    975603 Oct 12 20:57 agis_schedconf.cvmfs.json
[2025-10-13 05:56:58] drwx------. 5 boincer umatlas      4096 Oct 12 20:57 pilot3
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas      6654 Oct 13 05:47 init_data.xml
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas 189968824 Oct 13 05:52 HITS.46676269._086917.pool.root.1
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:52 boinc_task_state.xml
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas      1043 Oct 13 05:54 memory_monitor_summary.json
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas    665968 Oct 13 05:54 log.46676269._086917.job.log.tgz.1
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas        95 Oct 13 05:55 pilot_heartbeat.json
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas      7826 Oct 13 05:55 heartbeat.json
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas      4824 Oct 13 05:56 pilotlog.txt
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:56 boinc_mmap_file
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:56 wrapper_checkpoint.txt
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas   3624741 Oct 13 05:56 log.46676269._086917.job.log.1
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas       357 Oct 13 05:56 output.list
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:56 runtime_log
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas   4311040 Oct 13 05:56 result.tar.gz
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas       656 Oct 13 05:56 xiaKDmKWGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmijUMDmFWpVOo.diag
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 05:56 runtime_log.err
[2025-10-13 05:56:58] -rw-r--r--. 1 boincer umatlas     21275 Oct 13 05:56 stderr.txt
[2025-10-13 05:56:58] HITS file was successfully produced:
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas 189968824 Oct 13 05:52 shared/HITS.pool.root.1
[2025-10-13 05:56:58]  *** Contents of shared directory: ***
[2025-10-13 05:56:58] total 406696
[2025-10-13 05:56:58] -rw-r--r--. 2 boincer umatlas 221576191 Oct 12 20:56 ATLAS.root_0
[2025-10-13 05:56:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:56 start_atlas.sh
[2025-10-13 05:56:58] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 20:56 input.tar.gz
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas 189968824 Oct 13 05:52 HITS.pool.root.1
[2025-10-13 05:56:58] -rw-------. 1 boincer umatlas   4311040 Oct 13 05:56 result.tar.gz
05:57:00 (2341851): run_atlas exited; CPU time 48854.580027
05:57:00 (2341851): called boinc_finish(0)

</stderr_txt>
]]>

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