Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:17 (16325): wrapper (7.7.26015): starting
18:40:17 (16325): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:40:17] Arguments: --nthreads 8
[2025-10-12 18:40:17] Threads: 8
[2025-10-12 18:40:17] Checking for CVMFS
[2025-10-12 18:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:40:18] 2.11.2.0 2847 9111 72492 151640 0 59 12926195 20275201 1 130560 0 5545767 99.989 306713 31711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:40:18] CVMFS is ok
[2025-10-12 18:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:40:18] Further information can be found at the LHC@home message board.
[2025-10-12 18:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:40:18] Checking for apptainer binary...
[2025-10-12 18:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:40:18] Running /usr/bin/apptainer --version
[2025-10-12 18:40:18] apptainer version 1.3.2-1.el7
[2025-10-12 18:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:40:19] c-204-19.aglt2.org
[2025-10-12 18:40:19] apptainer works
[2025-10-12 18:40:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:40:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:40:19] Starting ATLAS job with PandaID=6840750110
[2025-10-12 18:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:44:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:44:54] 2025-10-13 00:43:50,347 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:44:54] 2025-10-13 00:43:50,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:44:54] 2025-10-13 00:43:50,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:44:54] 2025-10-13 00:43:50,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:44:54] 2025-10-13 00:43:50,350 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:44:54] 2025-10-13 00:43:50,350 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,351 | INFO     | sum of deviations: -12915763386.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,351 | INFO     | mean x: 1760312529.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,351 | INFO     | mean y: 2551552.520661157
[2025-10-12 20:44:54] 2025-10-13 00:43:50,351 | INFO     | -- intersect: 41393462944.52027
[2025-10-12 20:44:54] 2025-10-13 00:43:50,351 | INFO     | intersect: 41393462944.52027
[2025-10-12 20:44:54] 2025-10-13 00:43:50,351 | INFO     | chi2: 2.4827796930198724
[2025-10-12 20:44:54] 2025-10-13 00:43:50,352 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,352 | INFO     | sum of deviations: -3445084190.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,352 | INFO     | mean x: 1760312376.5
[2025-10-12 20:44:54] 2025-10-13 00:43:50,352 | INFO     | mean y: 2572997.9655172415
[2025-10-12 20:44:54] 2025-10-13 00:43:50,353 | INFO     | -- intersect: 12533103750.494856
[2025-10-12 20:44:54] 2025-10-13 00:43:50,353 | INFO     | intersect: 12533103750.494856
[2025-10-12 20:44:54] 2025-10-13 00:43:50,353 | INFO     | chi2: 1.6191296640203536
[2025-10-12 20:44:54] 2025-10-13 00:43:50,353 | INFO     | current chi2=1.6191296640203536 (change=34.78560870413104 %)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,353 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,354 | INFO     | sum of deviations: -2668618849.999997
[2025-10-12 20:44:54] 2025-10-13 00:43:50,354 | INFO     | mean x: 1760312224.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,354 | INFO     | mean y: 2574975.2162162163
[2025-10-12 20:44:54] 2025-10-13 00:43:50,354 | INFO     | -- intersect: 11080645959.09873
[2025-10-12 20:44:54] 2025-10-13 00:43:50,354 | INFO     | intersect: 11080645959.09873
[2025-10-12 20:44:54] 2025-10-13 00:43:50,355 | INFO     | chi2: 1.6208239658941297
[2025-10-12 20:44:54] 2025-10-13 00:43:50,355 | INFO     | current chi2=1.6208239658941297 (change=-0.1046427541552819 %)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,355 | INFO     | right removable region: 110
[2025-10-12 20:44:54] 2025-10-13 00:43:50,355 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,356 | INFO     | sum of deviations: -31100976727.5
[2025-10-12 20:44:54] 2025-10-13 00:43:50,356 | INFO     | mean x: 1760312681.5
[2025-10-12 20:44:54] 2025-10-13 00:43:50,356 | INFO     | mean y: 2593198.4051724137
[2025-10-12 20:44:54] 2025-10-13 00:43:50,356 | INFO     | -- intersect: 113123722131.08522
[2025-10-12 20:44:54] 2025-10-13 00:43:50,356 | INFO     | intersect: 113123722131.08522
[2025-10-12 20:44:54] 2025-10-13 00:43:50,356 | INFO     | chi2: 1.029828740960209
[2025-10-12 20:44:54] 2025-10-13 00:43:50,357 | INFO     | current chi2=1.029828740960209 (change=58.52113887287357 %)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,357 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,357 | INFO     | sum of deviations: -29563781211.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,357 | INFO     | mean x: 1760312834.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | mean y: 2589181.378378378
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | -- intersect: 122728912687.32608
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | intersect: 122728912687.32608
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | chi2: 1.016392973657274
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | current chi2=1.016392973657274 (change=1.3046603545369462 %)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | left removable region: 20
[2025-10-12 20:44:54] 2025-10-13 00:43:50,358 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 20:44:54] 2025-10-13 00:43:50,359 | INFO     | sum of deviations: -13351372011.0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,359 | INFO     | mean x: 1760312803.5
[2025-10-12 20:44:54] 2025-10-13 00:43:50,359 | INFO     | mean y: 2600499.2
[2025-10-12 20:44:54] 2025-10-13 00:43:50,359 | INFO     | -- intersect: 103985856506.8526
[2025-10-12 20:44:54] 2025-10-13 00:43:50,359 | INFO     | intersect: 103985856506.8526
[2025-10-12 20:44:54] 2025-10-13 00:43:50,360 | INFO     | chi2: 0.09295142154885169
[2025-10-12 20:44:54] 2025-10-13 00:43:50,360 | INFO     | -- intersect: 103985856506.8526
[2025-10-12 20:44:54] 2025-10-13 00:43:50,360 | INFO     | current memory leak: -59.07 B/s (using 90 data points, chi2=0.09)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,360 | INFO     | could have reported an average CPU frequency of 1926 MHz (8 samples)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,360 | INFO     | ..............................
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . Timing measurements:
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . get job = 0 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . initial setup = 2 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . payload setup = 8 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . stage-in = 0 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . payload execution = 7353 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . stage-out = 0 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | . log creation = 0 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,361 | INFO     | ..............................
[2025-10-12 20:44:54] 2025-10-13 00:43:50,451 | INFO     | 
[2025-10-12 20:44:54] 2025-10-13 00:43:50,452 | INFO     | job summary report
[2025-10-12 20:44:54] 2025-10-13 00:43:50,452 | INFO     | --------------------------------------------------
[2025-10-12 20:44:54] 2025-10-13 00:43:50,452 | INFO     | PanDA job id: 6840750110
[2025-10-12 20:44:54] 2025-10-13 00:43:50,452 | INFO     | task id: 46676269
[2025-10-12 20:44:54] 2025-10-13 00:43:50,452 | INFO     | errors: (none)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:44:54] 2025-10-13 00:43:50,453 | INFO     | pilot state: finished 
[2025-10-12 20:44:54] 2025-10-13 00:43:50,453 | INFO     | transexitcode: 0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,453 | INFO     | exeerrorcode: 0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,453 | INFO     | exeerrordiag: 
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | exitcode: 0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | exitmsg: OK
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | cpuconsumptiontime: 54638 s
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | nevents: 400
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | neventsw: 0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | pid: 27442
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | pgrp: 27442
[2025-10-12 20:44:54] 2025-10-13 00:43:50,454 | INFO     | corecount: 8
[2025-10-12 20:44:54] 2025-10-13 00:43:50,455 | INFO     | event service: False
[2025-10-12 20:44:54] 2025-10-13 00:43:50,455 | INFO     | sizes: {0: 2348856, 1: 2348856, 6: 2349146, 11: 2349174, 7365: 2376486, 7366: 2385484, 7369: 2385668, 7376: 2385862}
[2025-10-12 20:44:54] 2025-10-13 00:43:50,455 | INFO     | --------------------------------------------------
[2025-10-12 20:44:54] 2025-10-13 00:43:50,455 | INFO     | 
[2025-10-12 20:44:54] 2025-10-13 00:43:50,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:44:54] 2025-10-13 00:43:50,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:44:54] 2025-10-13 00:43:50,490 | INFO     | job 6840750110 has completed (purged errors)
[2025-10-12 20:44:54] 2025-10-13 00:43:50,490 | INFO     | overall cleanup function is called
[2025-10-12 20:44:54] 2025-10-13 00:43:51,498 | INFO     | --- collectZombieJob: --- 10, [27442]
[2025-10-12 20:44:54] 2025-10-13 00:43:51,499 | INFO     | zombie collector waiting for pid 27442
[2025-10-12 20:44:54] 2025-10-13 00:43:51,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:44:54] 2025-10-13 00:43:51,499 | INFO     | collected zombie processes
[2025-10-12 20:44:54] 2025-10-13 00:43:51,499 | INFO     | will attempt to kill all subprocesses of pid=27442
[2025-10-12 20:44:54] 2025-10-13 00:43:51,587 | INFO     | process IDs to be killed: [27442] (in reverse order)
[2025-10-12 20:44:54] 2025-10-13 00:43:51,650 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:44:54] 2025-10-13 00:43:51,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:44:54] 2025-10-13 00:43:51,655 | INFO     | did not find any defunct processes belonging to 27442
[2025-10-12 20:44:54] 2025-10-13 00:43:51,658 | INFO     | did not find any defunct processes belonging to 27442
[2025-10-12 20:44:54] 2025-10-13 00:43:51,658 | INFO     | ready for new job
[2025-10-12 20:44:54] 2025-10-13 00:43:51,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:44:54] 2025-10-13 00:43:51,659 | INFO     | ***************************************
[2025-10-12 20:44:54] 2025-10-13 00:43:51,660 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:44:54] 2025-10-13 00:43:51,660 | INFO     | ***************************************
[2025-10-12 20:44:54] 2025-10-13 00:43:51,660 | INFO     | 
[2025-10-12 20:44:54] 2025-10-13 00:43:51,660 | INFO     | architecture information:
[2025-10-12 20:44:54] 2025-10-13 00:43:51,661 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:44:54] 2025-10-13 00:43:51,679 | INFO     | cat /etc/os-release:
[2025-10-12 20:44:54] NAME="CentOS Linux"
[2025-10-12 20:44:54] VERSION="7 (Core)"
[2025-10-12 20:44:54] ID="centos"
[2025-10-12 20:44:54] ID_LIKE="rhel fedora"
[2025-10-12 20:44:54] VERSION_ID="7"
[2025-10-12 20:44:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:44:54] ANSI_COLOR="0;31"
[2025-10-12 20:44:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:44:54] HOME_URL="https://www.centos.org/"
[2025-10-12 20:44:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:44:54] 
[2025-10-12 20:44:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:44:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:44:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:44:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:44:54] 
[2025-10-12 20:44:54] 2025-10-13 00:43:51,680 | INFO     | ***************************************
[2025-10-12 20:44:54] 2025-10-13 00:43:52,183 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:44:54] 2025-10-13 00:43:52,203 | INFO     | sufficient remaining disk space (18548260864 B)
[2025-10-12 20:44:54] 2025-10-13 00:43:52,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:44:54] 2025-10-13 00:43:52,204 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:44:54] 2025-10-13 00:43:52,204 | INFO     | update_server=False
[2025-10-12 20:44:54] 2025-10-13 00:43:52,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:44:54] 2025-10-13 00:43:52,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:44:54] 2025-10-13 00:43:52,468 | INFO     | all job control threads have been joined
[2025-10-12 20:44:54] 2025-10-13 00:43:52,668 | INFO     | all data control threads have been joined
[2025-10-12 20:44:54] 2025-10-13 00:43:52,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:44:54] 2025-10-13 00:43:52,836 | INFO     | aborting loop
[2025-10-12 20:44:54] 2025-10-13 00:43:53,205 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,208 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,474 | INFO     | [job] control thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,505 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,542 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,662 | INFO     | all payload control threads have been joined
[2025-10-12 20:44:54] 2025-10-13 00:43:53,672 | INFO     | [data] control thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:44:54] 2025-10-13 00:43:53,842 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:53,917 | INFO     | [job] validate thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:54,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:44:54] 2025-10-13 00:43:54,172 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:54,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:54,509 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:54,538 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:54,540 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:54,667 | INFO     | [payload] control thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:55,708 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:43:58,052 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:44:54] 2025-10-13 00:44:22,410 | INFO     | PID=20024 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:44:54] 2025-10-13 00:44:22,411 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:44:54] 2025-10-13 00:44:22,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:44:54] 2025-10-13 00:44:22,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:44:54] 2025-10-13 00:44:49,091 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:44:54] 2025-10-13 00:44:49,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794080663360)>', '<ExcThread(monitor, started 139793040131840)>']
[2025-10-12 20:44:54] 2025-10-13 00:44:49,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:44:54] 2025-10-13 00:44:49,541 | INFO     | [monitor] control thread has ended
[2025-10-12 20:44:54] 2025-10-13 00:44:54,141 | INFO     | all workflow threads have been joined
[2025-10-12 20:44:54] 2025-10-13 00:44:54,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:44:54] 2025-10-13 00:44:54,148 | INFO     | traces error code: 0
[2025-10-12 20:44:54] 2025-10-13 00:44:54,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:44:54] 2025-10-13 00:44:54,260 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:44:54] 2025-10-13 00:44:54,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:44:54] 2025-10-13 00:44:54,270 [wrapper] pilotpid: 20024
[2025-10-12 20:44:54] 2025-10-13 00:44:54,275 [wrapper] Pilot exit status: 0
[2025-10-12 20:44:54] 2025-10-13 00:44:54,295 [wrapper] pandaids: 6840750110
[2025-10-12 20:44:54] 2025-10-13 00:44:54,347 [wrapper] cleanup supervisor_pilot 21982 20025
[2025-10-12 20:44:54] 2025-10-13 00:44:54,352 [wrapper] Test setup, not cleaning
[2025-10-12 20:44:54] 2025-10-13 00:44:54,357 [wrapper] apfmon messages muted
[2025-10-12 20:44:54] 2025-10-13 00:44:54,362 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:44:54] 2025-10-13 00:44:54,366 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:44:54]  *** Error codes and diagnostics ***
[2025-10-12 20:44:54]     "exeErrorCode": 0,
[2025-10-12 20:44:54]     "exeErrorDiag": "",
[2025-10-12 20:44:54]     "pilotErrorCode": 0,
[2025-10-12 20:44:54]     "pilotErrorDiag": "",
[2025-10-12 20:44:54]  *** Listing of results directory ***
[2025-10-12 20:44:54] total 414192
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:07 queuedata.json
[2025-10-12 20:44:54] -rwx------ 1 boincer umatlas     36292 Oct 12 17:07 runpilot2-wrapper.sh
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:44:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:40 run_atlas
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:40 job.xml
[2025-10-12 20:44:54] -rw-r--r-- 2 boincer umatlas 223034393 Oct 12 18:40 EVNT.46676267._004769.pool.root.1
[2025-10-12 20:44:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:40 start_atlas.sh
[2025-10-12 20:44:54] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:40 shared
[2025-10-12 20:44:54] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 18:40 input.tar.gz
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:40 boinc_lockfile
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 18:40 pandaJob.out
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas    975603 Oct 12 18:40 agis_schedconf.cvmfs.json
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas   1560580 Oct 12 18:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:44:54] drwx------ 5 boincer umatlas      4096 Oct 12 18:40 pilot3
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 20:40 init_data.xml
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas 194370866 Oct 12 20:43 HITS.46676269._089489.pool.root.1
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas       529 Oct 12 20:43 boinc_task_state.xml
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas      1049 Oct 12 20:43 memory_monitor_summary.json
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas    372051 Oct 12 20:43 log.46676269._089489.job.log.tgz.1
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas      7852 Oct 12 20:43 heartbeat.json
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas        95 Oct 12 20:44 pilot_heartbeat.json
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas        27 Oct 12 20:44 wrapper_checkpoint.txt
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:44 boinc_mmap_file
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas      4746 Oct 12 20:44 pilotlog.txt
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas   1044037 Oct 12 20:44 log.46676269._089489.job.log.1
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas       357 Oct 12 20:44 output.list
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:44 runtime_log
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas   1433600 Oct 12 20:44 result.tar.gz
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas       659 Oct 12 20:44 VIFLDmrSIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmt3UMDmkrX2bm.diag
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 20:44 runtime_log.err
[2025-10-12 20:44:54] -rw-r--r-- 1 boincer umatlas     20841 Oct 12 20:44 stderr.txt
[2025-10-12 20:44:54] HITS file was successfully produced:
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas 194370866 Oct 12 20:43 shared/HITS.pool.root.1
[2025-10-12 20:44:54]  *** Contents of shared directory: ***
[2025-10-12 20:44:54] total 409604
[2025-10-12 20:44:54] -rw-r--r-- 2 boincer umatlas 223034393 Oct 12 18:40 ATLAS.root_0
[2025-10-12 20:44:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:40 start_atlas.sh
[2025-10-12 20:44:54] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 18:40 input.tar.gz
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas 194370866 Oct 12 20:43 HITS.pool.root.1
[2025-10-12 20:44:54] -rw------- 1 boincer umatlas   1433600 Oct 12 20:44 result.tar.gz
20:44:56 (16325): run_atlas exited; CPU time 54655.839172
20:44:56 (16325): called boinc_finish(0)

</stderr_txt>
]]>

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