Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:38:51 (418804): wrapper (7.7.26015): starting
00:38:51 (418804): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 00:38:51] Arguments: --nthreads 3
[2025-10-13 00:38:51] Threads: 3
[2025-10-13 00:38:51] Checking for CVMFS
[2025-10-13 00:38:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:38:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:38:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:38:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:38:51] 2.9.2.0 2543460 4932 85052 151640 1 57 4225732 36864001 0 130560 0 3809579 99.991 170532 1026 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 00:38:51] CVMFS is ok
[2025-10-13 00:38:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:38:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:38:51] Further information can be found at the LHC@home message board.
[2025-10-13 00:38:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:38:51] Checking for apptainer binary...
[2025-10-13 00:38:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:38:51] Running /usr/bin/apptainer --version
[2025-10-13 00:38:51] apptainer version 1.4.1-1.1
[2025-10-13 00:38:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:38:51] cosA125b
[2025-10-13 00:38:51] apptainer works
[2025-10-13 00:38:51] Set ATHENA_PROC_NUMBER=3
[2025-10-13 00:38:51] Set ATHENA_CORE_NUMBER=3
[2025-10-13 00:38:51] Starting ATLAS job with PandaID=6840537980
[2025-10-13 00:38:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:01:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:01:09]  lfn=log.46676269._086852.job.log.tgz.1
[2025-10-13 02:01:09]  mtime=0
[2025-10-13 02:01:09]  protocol_id=None
[2025-10-13 02:01:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 02:01:09]  replicas=None
[2025-10-13 02:01:09]  scope=mc23_13p6TeV
[2025-10-13 02:01:09]  status=None
[2025-10-13 02:01:09]  status_code=0
[2025-10-13 02:01:09]  storage_token=
[2025-10-13 02:01:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840537980/log.46676269._086852.job.log.tgz.1
[2025-10-13 02:01:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/01/log.46676269._086852.job.log.tgz.1
[2025-10-13 02:01:09]  workdir=None
[2025-10-13 02:01:09] ]
[2025-10-13 02:01:09] 2025-10-13 00:00:33,266 | INFO     | transferring file log.46676269._086852.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840537980/log.46676269._086852.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 02:01:09] 2025-10-13 00:00:33,266 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840537980/log.46676269._086852.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0868
[2025-10-13 02:01:09] 2025-10-13 00:00:33,277 | INFO     | adding to output.list: log.46676269._086852.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/01/log.46676269._086852.job.log.tg
[2025-10-13 02:01:09] 2025-10-13 00:00:33,278 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 02:01:09] 2025-10-13 00:00:33,278 | INFO     | summary of transferred files:
[2025-10-13 02:01:09] 2025-10-13 00:00:33,278 | INFO     |  -- lfn=log.46676269._086852.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 02:01:09] 2025-10-13 00:00:33,278 | INFO     | stage-out finished correctly
[2025-10-13 02:01:09] 2025-10-13 00:00:33,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | job 6840537980 has state=finished
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | preparing for final server update for job 6840537980 in state='finished'
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | this job has now completed (state=finished)
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | log transfer has been attempted: DONE
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | job 6840537980 has finished - writing final server update
[2025-10-13 02:01:09] 2025-10-13 00:00:33,453 | INFO     | total number of processed events: 400 (read)
[2025-10-13 02:01:09] 2025-10-13 00:00:33,454 | INFO     | executing command: lscpu
[2025-10-13 02:01:09] 2025-10-13 00:00:33,466 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 02:01:09] 2025-10-13 00:00:34,361 | INFO     | time since job start (4898s) is within the limit (172800.0s)
[2025-10-13 02:01:09] 2025-10-13 00:00:36,366 | INFO     | time since job start (4900s) is within the limit (172800.0s)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,128 | WARNING  | process 428976 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 02:01:09] 2025-10-13 00:00:38,129 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840537980/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,186 | INFO     | number of running child processes to parent process 428976: 1
[2025-10-13 02:01:09] 2025-10-13 00:00:38,186 | INFO     | maximum number of monitored processes: 6
[2025-10-13 02:01:09] 2025-10-13 00:00:38,214 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 02:01:09] 2025-10-13 00:00:38,215 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3837.4228333333335
[2025-10-13 02:01:09] 2025-10-13 00:00:38,216 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840537980/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,216 | INFO     | extracted standard info from prmon json
[2025-10-13 02:01:09] 2025-10-13 00:00:38,216 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:01:09] 2025-10-13 00:00:38,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:01:09] 2025-10-13 00:00:38,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:01:09] 2025-10-13 00:00:38,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:01:09] 2025-10-13 00:00:38,217 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:01:09] 2025-10-13 00:00:38,217 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,217 | INFO     | sum of deviations: -10796845487.0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,217 | INFO     | mean x: 1760311257.0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,217 | INFO     | mean y: 2463738.9315068494
[2025-10-13 02:01:09] 2025-10-13 00:00:38,217 | INFO     | -- intersect: 157589632233.7948
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | intersect: 157589632233.7948
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | chi2: 0.06558204411309876
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | -- intersect: 157589632233.7948
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | current memory leak: -89.52 B/s (using 73 data points, chi2=0.07)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | could have reported an average CPU frequency of 3981 MHz (6 samples)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | ..............................
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . Timing measurements:
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . get job = 0 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . initial setup = 1 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . payload setup = 2 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . stage-in = 0 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . payload execution = 4876 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . stage-out = 0 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | . log creation = 0 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,218 | INFO     | ..............................
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | 
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | job summary report
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | --------------------------------------------------
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | PanDA job id: 6840537980
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | task id: 46676269
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | errors: (none)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | pilot state: finished 
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | transexitcode: 0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | exeerrorcode: 0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | exeerrordiag: 
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | exitcode: 0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | exitmsg: OK
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | cpuconsumptiontime: 14041 s
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | nevents: 400
[2025-10-13 02:01:09] 2025-10-13 00:00:38,249 | INFO     | neventsw: 0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | pid: 428976
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | pgrp: 428976
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | corecount: 3
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | event service: False
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | sizes: {0: 2348860, 2: 2349122, 11: 2349150, 4883: 2384595, 4888: 2384733}
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | --------------------------------------------------
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | 
[2025-10-13 02:01:09] 2025-10-13 00:00:38,250 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | job 6840537980 has completed (purged errors)
[2025-10-13 02:01:09] 2025-10-13 00:00:38,263 | INFO     | overall cleanup function is called
[2025-10-13 02:01:09] 2025-10-13 00:00:39,269 | INFO     | --- collectZombieJob: --- 10, [428976]
[2025-10-13 02:01:09] 2025-10-13 00:00:39,269 | INFO     | zombie collector waiting for pid 428976
[2025-10-13 02:01:09] 2025-10-13 00:00:39,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:01:09] 2025-10-13 00:00:39,269 | INFO     | collected zombie processes
[2025-10-13 02:01:09] 2025-10-13 00:00:39,269 | INFO     | will attempt to kill all subprocesses of pid=428976
[2025-10-13 02:01:09] 2025-10-13 00:00:39,319 | INFO     | process IDs to be killed: [428976] (in reverse order)
[2025-10-13 02:01:09] 2025-10-13 00:00:39,345 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:01:09] 2025-10-13 00:00:39,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:01:09] 2025-10-13 00:00:39,347 | INFO     | did not find any defunct processes belonging to 428976
[2025-10-13 02:01:09] 2025-10-13 00:00:39,348 | INFO     | did not find any defunct processes belonging to 428976
[2025-10-13 02:01:09] 2025-10-13 00:00:39,348 | INFO     | ready for new job
[2025-10-13 02:01:09] 2025-10-13 00:00:39,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:01:09] 2025-10-13 00:00:39,349 | INFO     | ***************************************
[2025-10-13 02:01:09] 2025-10-13 00:00:39,349 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:01:09] 2025-10-13 00:00:39,349 | INFO     | ***************************************
[2025-10-13 02:01:09] 2025-10-13 00:00:39,349 | INFO     | 
[2025-10-13 02:01:09] 2025-10-13 00:00:39,350 | INFO     | architecture information:
[2025-10-13 02:01:09] 2025-10-13 00:00:39,350 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:01:09] 2025-10-13 00:00:39,358 | INFO     | cat /etc/os-release:
[2025-10-13 02:01:09] NAME="CentOS Linux"
[2025-10-13 02:01:09] VERSION="7 (Core)"
[2025-10-13 02:01:09] ID="centos"
[2025-10-13 02:01:09] ID_LIKE="rhel fedora"
[2025-10-13 02:01:09] VERSION_ID="7"
[2025-10-13 02:01:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:01:09] ANSI_COLOR="0;31"
[2025-10-13 02:01:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:01:09] HOME_URL="https://www.centos.org/"
[2025-10-13 02:01:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:01:09] 
[2025-10-13 02:01:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:01:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:01:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:01:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:01:09] 
[2025-10-13 02:01:09] 2025-10-13 00:00:39,359 | INFO     | ***************************************
[2025-10-13 02:01:09] 2025-10-13 00:00:39,861 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | INFO     | sufficient remaining disk space (357791956992 B)
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | INFO     | update_server=False
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:01:09] 2025-10-13 00:00:39,871 | INFO     | aborting loop
[2025-10-13 02:01:09] 2025-10-13 00:00:39,877 | INFO     | all payload control threads have been joined
[2025-10-13 02:01:09] 2025-10-13 00:00:40,378 | INFO     | all data control threads have been joined
[2025-10-13 02:01:09] 2025-10-13 00:00:40,877 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:40,877 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:40,877 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:40,883 | INFO     | [payload] control thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:40,970 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:41,083 | INFO     | all job control threads have been joined
[2025-10-13 02:01:09] 2025-10-13 00:00:41,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:01:09] 2025-10-13 00:00:41,341 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:41,384 | INFO     | [data] control thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:41,656 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:41,871 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:42,089 | INFO     | [job] control thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:42,142 | INFO     | [job] validate thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:42,268 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:42,323 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:43,322 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:43,878 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:00:50,435 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:01:09] 2025-10-13 00:00:51,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:01:09] 2025-10-13 00:01:03,114 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:01:09] 2025-10-13 00:01:04,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716938405696)>', '<ExcThread(monitor, started 140716583925504)>']
[2025-10-13 02:01:09] 2025-10-13 00:01:09,250 | INFO     | all workflow threads have been joined
[2025-10-13 02:01:09] 2025-10-13 00:01:09,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:01:09] 2025-10-13 00:01:09,250 | INFO     | traces error code: 0
[2025-10-13 02:01:09] 2025-10-13 00:01:09,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:01:09] 2025-10-13 00:01:09,451 | INFO     | PID=422518 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 02:01:09] 2025-10-13 00:01:09,451 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:01:09] 2025-10-13 00:01:09,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:01:09] 2025-10-13 00:01:09,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:01:09] 2025-10-13 00:01:09,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:01:09] 2025-10-13 00:01:09,451 | INFO     | [monitor] control thread has ended
[2025-10-13 02:01:09] 2025-10-13 00:01:09,498 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:01:09] 2025-10-13 00:01:09,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:01:09] 2025-10-13 00:01:09,503 [wrapper] pilotpid: 422518
[2025-10-13 02:01:09] 2025-10-13 00:01:09,505 [wrapper] Pilot exit status: 0
[2025-10-13 02:01:09] 2025-10-13 00:01:09,512 [wrapper] pandaids: 6840537980
[2025-10-13 02:01:09] 2025-10-13 00:01:09,530 [wrapper] cleanup supervisor_pilot  450980 422519
[2025-10-13 02:01:09] 2025-10-13 00:01:09,532 [wrapper] Test setup, not cleaning
[2025-10-13 02:01:09] 2025-10-13 00:01:09,534 [wrapper] apfmon messages muted
[2025-10-13 02:01:09] 2025-10-13 00:01:09,536 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:01:09] 2025-10-13 00:01:09,539 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:01:09]  *** Error codes and diagnostics ***
[2025-10-13 02:01:09]     "exeErrorCode": 0,
[2025-10-13 02:01:09]     "exeErrorDiag": "",
[2025-10-13 02:01:09]     "pilotErrorCode": 0,
[2025-10-13 02:01:09]     "pilotErrorDiag": "",
[2025-10-13 02:01:09]  *** Listing of results directory ***
[2025-10-13 02:01:09] total 410504
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:53 pilot3.tar.gz
[2025-10-13 02:01:09] -rwx------ 1 boinc boinc     36292 Oct 12 20:59 runpilot2-wrapper.sh
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:59 queuedata.json
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:01:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:38 run_atlas
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:38 job.xml
[2025-10-13 02:01:09] -rw-r--r-- 2 boinc boinc 222763090 Oct 13 00:38 EVNT.46676267._004433.pool.root.1
[2025-10-13 02:01:09] -rw-r--r-- 2 boinc boinc    569679 Oct 13 00:38 input.tar.gz
[2025-10-13 02:01:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:38 start_atlas.sh
[2025-10-13 02:01:09] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:38 shared
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:38 boinc_setup_complete
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc      6441 Oct 13 00:38 init_data.xml
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:38 boinc_lockfile
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:38 pandaJob.out
[2025-10-13 02:01:09] -rw------- 1 boinc boinc    975603 Oct 13 00:38 agis_schedconf.cvmfs.json
[2025-10-13 02:01:09] -rw------- 1 boinc boinc   1560580 Oct 13 00:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:01:09] drwx------ 5 boinc boinc      4096 Oct 13 00:38 pilot3
[2025-10-13 02:01:09] -rw------- 1 boinc boinc 191705791 Oct 13 02:00 HITS.46676269._086852.pool.root.1
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc       529 Oct 13 02:00 boinc_task_state.xml
[2025-10-13 02:01:09] -rw------- 1 boinc boinc        95 Oct 13 02:00 pilot_heartbeat.json
[2025-10-13 02:01:09] -rw------- 1 boinc boinc      1017 Oct 13 02:00 memory_monitor_summary.json
[2025-10-13 02:01:09] -rw------- 1 boinc boinc    269058 Oct 13 02:00 log.46676269._086852.job.log.tgz.1
[2025-10-13 02:01:09] -rw------- 1 boinc boinc      7780 Oct 13 02:00 heartbeat.json
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 02:01 boinc_mmap_file
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc        27 Oct 13 02:01 wrapper_checkpoint.txt
[2025-10-13 02:01:09] -rw------- 1 boinc boinc       746 Oct 13 02:01 pilotlog.txt
[2025-10-13 02:01:09] -rw------- 1 boinc boinc    720433 Oct 13 02:01 log.46676269._086852.job.log.1
[2025-10-13 02:01:09] -rw------- 1 boinc boinc       357 Oct 13 02:01 output.list
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:01 runtime_log
[2025-10-13 02:01:09] -rw------- 1 boinc boinc   1013760 Oct 13 02:01 result.tar.gz
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc      8787 Oct 13 02:01 runtime_log.err
[2025-10-13 02:01:09] -rw------- 1 boinc boinc       660 Oct 13 02:01 4Z1MDmNTGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNClNDmtW7cLm.diag
[2025-10-13 02:01:09] -rw-r--r-- 1 boinc boinc     21578 Oct 13 02:01 stderr.txt
[2025-10-13 02:01:09] HITS file was successfully produced:
[2025-10-13 02:01:09] -rw------- 1 boinc boinc 191705791 Oct 13 02:00 shared/HITS.pool.root.1
[2025-10-13 02:01:09]  *** Contents of shared directory: ***
[2025-10-13 02:01:09] total 406336
[2025-10-13 02:01:09] -rw-r--r-- 2 boinc boinc 222763090 Oct 13 00:38 ATLAS.root_0
[2025-10-13 02:01:09] -rw-r--r-- 2 boinc boinc    569679 Oct 13 00:38 input.tar.gz
[2025-10-13 02:01:09] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:38 start_atlas.sh
[2025-10-13 02:01:09] -rw------- 1 boinc boinc 191705791 Oct 13 02:00 HITS.pool.root.1
[2025-10-13 02:01:09] -rw------- 1 boinc boinc   1013760 Oct 13 02:01 result.tar.gz
02:01:11 (418804): run_atlas exited; CPU time 14066.235522
02:01:11 (418804): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN