Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:21:21 (2585464): wrapper (7.7.26015): starting
05:21:21 (2585464): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:21:21] Arguments: --nthreads 4
[2025-10-13 05:21:21] Threads: 4
[2025-10-13 05:21:21] Checking for CVMFS
[2025-10-13 05:21:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:21:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:21:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:21:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:21:22] 2.13.2.0 428253 5248 52612 151647 0 57 2258243 4096001 2766 130560 0 17198977 99.997 307673 2363 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 05:21:22] CVMFS is ok
[2025-10-13 05:21:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:21:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 05:21:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 05:21:22] Further information can be found at the LHC@home message board.
[2025-10-13 05:21:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:21:22] Checking for apptainer binary...
[2025-10-13 05:21:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:21:22] Running /usr/bin/apptainer --version
[2025-10-13 05:21:22] apptainer version 1.4.2
[2025-10-13 05:21:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:21:22] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-13 05:21:22] apptainer works
[2025-10-13 05:21:22] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:21:22] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:21:22] Starting ATLAS job with PandaID=6840536049
[2025-10-13 05:21:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:41:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:41:43]  scope=mc23_13p6TeV
[2025-10-13 06:41:43]  status=None
[2025-10-13 06:41:43]  status_code=0
[2025-10-13 06:41:43]  storage_token=
[2025-10-13 06:41:43]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6840536049/log.46676269._086104.job.log.tgz.1
[2025-10-13 06:41:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/f0/log.46676269._086104.job.log.tgz.1
[2025-10-13 06:41:43]  workdir=None
[2025-10-13 06:41:43] ]
[2025-10-13 06:41:43] 2025-10-13 04:40:29,894 | INFO     | transferring file log.46676269._086104.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6840536049/log.46676269._086104.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 06:41:43] 2025-10-13 04:40:29,894 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6840536049/log.46676269._086104.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.466762
[2025-10-13 06:41:43] 2025-10-13 04:40:29,908 | INFO     | adding to output.list: log.46676269._086104.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/f0/log.46676269._086104.job.log.tg
[2025-10-13 06:41:43] 2025-10-13 04:40:29,909 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:41:43] 2025-10-13 04:40:29,909 | INFO     | summary of transferred files:
[2025-10-13 06:41:43] 2025-10-13 04:40:29,909 | INFO     |  -- lfn=log.46676269._086104.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:41:43] 2025-10-13 04:40:29,909 | INFO     | stage-out finished correctly
[2025-10-13 06:41:43] 2025-10-13 04:40:31,066 | INFO     | monitor loop #363: job 0:6840536049 is in state 'finished'
[2025-10-13 06:41:43] 2025-10-13 04:40:31,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:41:43] 2025-10-13 04:40:31,399 | INFO     | time since job start (4743s) is within the limit (172800.0s)
[2025-10-13 06:41:43] 2025-10-13 04:40:32,397 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:41:43] 2025-10-13 04:40:33,409 | INFO     | time since job start (4745s) is within the limit (172800.0s)
[2025-10-13 06:41:43] 2025-10-13 04:40:33,568 | INFO     | monitor loop #364: job 0:6840536049 is in state 'finished'
[2025-10-13 06:41:43] 2025-10-13 04:40:33,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:41:43] 2025-10-13 04:40:33,775 | INFO     | job 6840536049 has state=finished
[2025-10-13 06:41:43] 2025-10-13 04:40:33,775 | INFO     | preparing for final server update for job 6840536049 in state='finished'
[2025-10-13 06:41:43] 2025-10-13 04:40:33,775 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:41:43] 2025-10-13 04:40:33,775 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:41:43] 2025-10-13 04:40:33,775 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:41:43] 2025-10-13 04:40:33,776 | INFO     | job 6840536049 has finished - writing final server update
[2025-10-13 06:41:43] 2025-10-13 04:40:33,776 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:41:43] 2025-10-13 04:40:33,790 | INFO     | executing command: lscpu
[2025-10-13 06:41:43] 2025-10-13 04:40:33,831 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:41:43] 2025-10-13 04:40:35,415 | INFO     | time since job start (4747s) is within the limit (172800.0s)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,070 | INFO     | monitor loop #365: job 0:6840536049 is in state 'finished'
[2025-10-13 06:41:43] 2025-10-13 04:40:36,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,486 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:41:43] 2025-10-13 04:40:36,488 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4570.442562499999
[2025-10-13 06:41:43] 2025-10-13 04:40:36,491 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6840536049/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,492 | INFO     | extracted standard info from prmon json
[2025-10-13 06:41:43] 2025-10-13 04:40:36,492 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:41:43] 2025-10-13 04:40:36,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:41:43] 2025-10-13 04:40:36,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:41:43] 2025-10-13 04:40:36,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | sum of deviations: -14884847473.000002
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | mean x: 1760328149.0
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | mean y: 2569154.323943662
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | -- intersect: 236143196852.191
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | intersect: 236143196852.191
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | chi2: 0.12224274088704698
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | -- intersect: 236143196852.191
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | current memory leak: -134.15 B/s (using 71 data points, chi2=0.12)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | could have reported an average CPU frequency of 4465 MHz (6 samples)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | ..............................
[2025-10-13 06:41:43] 2025-10-13 04:40:36,493 | INFO     | . Timing measurements:
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . get job = 0 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . initial setup = 1 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . payload setup = 4 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . stage-in = 0 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . payload execution = 4718 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . stage-out = 0 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | . log creation = 0 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,494 | INFO     | ..............................
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | 
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | job summary report
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | --------------------------------------------------
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | PanDA job id: 6840536049
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | task id: 46676269
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | errors: (none)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | pilot state: finished 
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | transexitcode: 0
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | exeerrorcode: 0
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | exeerrordiag: 
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | exitcode: 0
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | exitmsg: OK
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | cpuconsumptiontime: 18290 s
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | nevents: 400
[2025-10-13 06:41:43] 2025-10-13 04:40:36,540 | INFO     | neventsw: 0
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | pid: 2595960
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | pgrp: 2595960
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | corecount: 4
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | event service: False
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 4726: 2375504, 4728: 2384516, 4730: 2384572, 4734: 2384894}
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | --------------------------------------------------
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | 
[2025-10-13 06:41:43] 2025-10-13 04:40:36,541 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-13 06:41:43] 2025-10-13 04:40:36,575 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | job 6840536049 has completed (purged errors)
[2025-10-13 06:41:43] 2025-10-13 04:40:36,576 | INFO     | overall cleanup function is called
[2025-10-13 06:41:43] 2025-10-13 04:40:37,582 | INFO     | --- collectZombieJob: --- 10, [2595960]
[2025-10-13 06:41:43] 2025-10-13 04:40:37,582 | INFO     | zombie collector waiting for pid 2595960
[2025-10-13 06:41:43] 2025-10-13 04:40:37,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:41:43] 2025-10-13 04:40:37,583 | INFO     | collected zombie processes
[2025-10-13 06:41:43] 2025-10-13 04:40:37,583 | INFO     | will attempt to kill all subprocesses of pid=2595960
[2025-10-13 06:41:43] 2025-10-13 04:40:37,654 | INFO     | process IDs to be killed: [2595960] (in reverse order)
[2025-10-13 06:41:43] 2025-10-13 04:40:37,695 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:41:43] 2025-10-13 04:40:37,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:41:43] 2025-10-13 04:40:37,697 | INFO     | did not find any defunct processes belonging to 2595960
[2025-10-13 06:41:43] 2025-10-13 04:40:37,699 | INFO     | did not find any defunct processes belonging to 2595960
[2025-10-13 06:41:43] 2025-10-13 04:40:37,699 | INFO     | ready for new job
[2025-10-13 06:41:43] 2025-10-13 04:40:37,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:41:43] 2025-10-13 04:40:37,700 | INFO     | ***************************************
[2025-10-13 06:41:43] 2025-10-13 04:40:37,701 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:41:43] 2025-10-13 04:40:37,701 | INFO     | ***************************************
[2025-10-13 06:41:43] 2025-10-13 04:40:37,701 | INFO     | 
[2025-10-13 06:41:43] 2025-10-13 04:40:37,702 | INFO     | architecture information:
[2025-10-13 06:41:43] 2025-10-13 04:40:37,702 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:41:43] 2025-10-13 04:40:37,716 | INFO     | cat /etc/os-release:
[2025-10-13 06:41:43] NAME="CentOS Linux"
[2025-10-13 06:41:43] VERSION="7 (Core)"
[2025-10-13 06:41:43] ID="centos"
[2025-10-13 06:41:43] ID_LIKE="rhel fedora"
[2025-10-13 06:41:43] VERSION_ID="7"
[2025-10-13 06:41:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:41:43] ANSI_COLOR="0;31"
[2025-10-13 06:41:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:41:43] HOME_URL="https://www.centos.org/"
[2025-10-13 06:41:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:41:43] 
[2025-10-13 06:41:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:41:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:41:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:41:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:41:43] 
[2025-10-13 06:41:43] 2025-10-13 04:40:37,716 | INFO     | ***************************************
[2025-10-13 06:41:43] 2025-10-13 04:40:38,219 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-13 06:41:43] 2025-10-13 04:40:38,260 | INFO     | sufficient remaining disk space (1766494044160 B)
[2025-10-13 06:41:43] 2025-10-13 04:40:38,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:41:43] 2025-10-13 04:40:38,261 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:41:43] 2025-10-13 04:40:38,261 | INFO     | update_server=False
[2025-10-13 06:41:43] 2025-10-13 04:40:38,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:41:43] 2025-10-13 04:40:38,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:41:43] 2025-10-13 04:40:38,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:41:43] 2025-10-13 04:40:38,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:41:43] 2025-10-13 04:40:38,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:41:43] 2025-10-13 04:40:38,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:41:43] 2025-10-13 04:40:38,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:41:43] 2025-10-13 04:40:38,574 | INFO     | will abort loop
[2025-10-13 06:41:43] 2025-10-13 04:40:38,937 | INFO     | all job control threads have been joined
[2025-10-13 06:41:43] 2025-10-13 04:40:39,038 | INFO     | all data control threads have been joined
[2025-10-13 06:41:43] 2025-10-13 04:40:39,264 | INFO     | all payload control threads have been joined
[2025-10-13 06:41:43] 2025-10-13 04:40:39,265 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:39,266 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:39,504 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:39,579 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:39,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:39,687 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:39,942 | INFO     | [job] control thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,043 | INFO     | [data] control thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,123 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,267 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,269 | INFO     | [payload] control thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,299 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,335 | INFO     | [job] validate thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,514 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:40,586 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:40:42,445 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:41:43] 2025-10-13 04:41:08,582 | INFO     | PID=2589310 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:41:43] 2025-10-13 04:41:08,582 | INFO     | .. there are 3 such processes running
[2025-10-13 06:41:43] 2025-10-13 04:41:08,584 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:41:43] 2025-10-13 04:41:08,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:41:43] 2025-10-13 04:41:08,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:41:43] 2025-10-13 04:41:36,348 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:41:43] 2025-10-13 04:41:37,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129200457508672)>', '<ExcThread(monitor, started 129199956272896)>']
[2025-10-13 06:41:43] 2025-10-13 04:41:38,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:41:43] 2025-10-13 04:41:38,748 | INFO     | [monitor] control thread has ended
[2025-10-13 06:41:43] 2025-10-13 04:41:42,950 | INFO     | all workflow threads have been joined
[2025-10-13 06:41:43] 2025-10-13 04:41:42,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:41:43] 2025-10-13 04:41:42,951 | INFO     | traces error code: 0
[2025-10-13 06:41:43] 2025-10-13 04:41:42,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:41:43] 2025-10-13 04:41:43,005 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:41:43] 2025-10-13 04:41:43,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:41:43] 2025-10-13 04:41:43,009 [wrapper] pilotpid: 2589310
[2025-10-13 06:41:43] 2025-10-13 04:41:43,011 [wrapper] Pilot exit status: 0
[2025-10-13 06:41:43] 2025-10-13 04:41:43,024 [wrapper] pandaids: 6840536049
[2025-10-13 06:41:43] 2025-10-13 04:41:43,046 [wrapper] cleanup supervisor_pilot 2659824 2589311
[2025-10-13 06:41:43] 2025-10-13 04:41:43,050 [wrapper] Test setup, not cleaning
[2025-10-13 06:41:43] 2025-10-13 04:41:43,051 [wrapper] apfmon messages muted
[2025-10-13 06:41:43] 2025-10-13 04:41:43,052 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:41:43] 2025-10-13 04:41:43,055 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:41:43]  *** Error codes and diagnostics ***
[2025-10-13 06:41:43]     "exeErrorCode": 0,
[2025-10-13 06:41:43]     "exeErrorDiag": "",
[2025-10-13 06:41:43]     "pilotErrorCode": 0,
[2025-10-13 06:41:43]     "pilotErrorDiag": "",
[2025-10-13 06:41:43]  *** Listing of results directory ***
[2025-10-13 06:41:43] total 414080
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:20 pilot3.tar.gz
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:25 queuedata.json
[2025-10-13 06:41:43] -rwx------ 1 boinc boinc     36292 Oct 12 20:26 runpilot2-wrapper.sh
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:41:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:21 run_atlas
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:21 job.xml
[2025-10-13 06:41:43] -rw-r--r-- 2 boinc boinc 221980244 Oct 13 05:21 EVNT.46676267._004404.pool.root.1
[2025-10-13 06:41:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:21 start_atlas.sh
[2025-10-13 06:41:43] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:21 shared
[2025-10-13 06:41:43] -rw-r--r-- 2 boinc boinc    569681 Oct 13 05:21 input.tar.gz
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:21 boinc_lockfile
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:21 pandaJob.out
[2025-10-13 06:41:43] -rw------- 1 boinc boinc    974373 Oct 13 05:21 agis_schedconf.cvmfs.json
[2025-10-13 06:41:43] -rw------- 1 boinc boinc   1560580 Oct 13 05:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:41:43] drwx------ 5 boinc boinc      4096 Oct 13 05:21 pilot3
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc      9520 Oct 13 06:39 init_data.xml
[2025-10-13 06:41:43] -rw------- 1 boinc boinc 196166482 Oct 13 06:40 HITS.46676269._086104.pool.root.1
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc       529 Oct 13 06:40 boinc_task_state.xml
[2025-10-13 06:41:43] -rw------- 1 boinc boinc      1025 Oct 13 06:40 memory_monitor_summary.json
[2025-10-13 06:41:43] -rw------- 1 boinc boinc    261433 Oct 13 06:40 log.46676269._086104.job.log.tgz.1
[2025-10-13 06:41:43] -rw------- 1 boinc boinc      7790 Oct 13 06:40 heartbeat.json
[2025-10-13 06:41:43] -rw------- 1 boinc boinc        95 Oct 13 06:41 pilot_heartbeat.json
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:41 boinc_mmap_file
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:41 wrapper_checkpoint.txt
[2025-10-13 06:41:43] -rw------- 1 boinc boinc      5018 Oct 13 06:41 pilotlog.txt
[2025-10-13 06:41:43] -rw------- 1 boinc boinc    718442 Oct 13 06:41 log.46676269._086104.job.log.1
[2025-10-13 06:41:43] -rw------- 1 boinc boinc       357 Oct 13 06:41 output.list
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:41 runtime_log
[2025-10-13 06:41:43] -rw------- 1 boinc boinc   1003520 Oct 13 06:41 result.tar.gz
[2025-10-13 06:41:43] -rw------- 1 boinc boinc       657 Oct 13 06:41 sQIKDmqwFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO3kNDmdDk7wn.diag
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc      8841 Oct 13 06:41 runtime_log.err
[2025-10-13 06:41:43] -rw-r--r-- 1 boinc boinc     22019 Oct 13 06:41 stderr.txt
[2025-10-13 06:41:43] HITS file was successfully produced:
[2025-10-13 06:41:43] -rw------- 1 boinc boinc 196166482 Oct 13 06:40 shared/HITS.pool.root.1
[2025-10-13 06:41:43]  *** Contents of shared directory: ***
[2025-10-13 06:41:43] total 409916
[2025-10-13 06:41:43] -rw-r--r-- 2 boinc boinc 221980244 Oct 13 05:21 ATLAS.root_0
[2025-10-13 06:41:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:21 start_atlas.sh
[2025-10-13 06:41:43] -rw-r--r-- 2 boinc boinc    569681 Oct 13 05:21 input.tar.gz
[2025-10-13 06:41:43] -rw------- 1 boinc boinc 196166482 Oct 13 06:40 HITS.pool.root.1
[2025-10-13 06:41:43] -rw------- 1 boinc boinc   1003520 Oct 13 06:41 result.tar.gz
06:41:44 (2585464): run_atlas exited; CPU time 18306.936071
06:41:44 (2585464): called boinc_finish(0)

</stderr_txt>
]]>

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