Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:48 (5266): wrapper (7.7.26015): starting
18:37:48 (5266): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:37:48] Arguments: --nthreads 8
[2025-10-12 18:37:48] Threads: 8
[2025-10-12 18:37:48] Checking for CVMFS
[2025-10-12 18:37:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:37:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:37:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:37:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:37:48] 2.11.2.0 5808 106181 97868 151640 0 59 16104558 18432000 2749 130560 0 66931995 99.978 4087837 4216 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 18:37:48] CVMFS is ok
[2025-10-12 18:37:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:37:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:37:48] Further information can be found at the LHC@home message board.
[2025-10-12 18:37:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:37:48] Checking for apptainer binary...
[2025-10-12 18:37:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:37:48] Running /usr/bin/apptainer --version
[2025-10-12 18:37:48] apptainer version 1.3.2-1.el7
[2025-10-12 18:37:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:37:49] c-9-34.aglt2.org
[2025-10-12 18:37:49] apptainer works
[2025-10-12 18:37:49] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:37:49] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:37:49] Starting ATLAS job with PandaID=6840750047
[2025-10-12 18:37:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:24:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:24:22] 2025-10-13 01:23:41,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:24:22] 2025-10-13 01:23:41,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:24:22] 2025-10-13 01:23:41,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:24:22] 2025-10-13 01:23:41,378 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:24:22] 2025-10-13 01:23:41,379 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,379 | INFO     | sum of deviations: -10718353188.000004
[2025-10-12 21:24:22] 2025-10-13 01:23:41,379 | INFO     | mean x: 1760313647.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,379 | INFO     | mean y: 2490472.0858895704
[2025-10-12 21:24:22] 2025-10-13 01:23:41,379 | INFO     | -- intersect: 14053037361.552423
[2025-10-12 21:24:22] 2025-10-13 01:23:41,380 | INFO     | intersect: 14053037361.552423
[2025-10-12 21:24:22] 2025-10-13 01:23:41,380 | INFO     | chi2: 2.26317808126641
[2025-10-12 21:24:22] 2025-10-13 01:23:41,380 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | sum of deviations: 297247784.500003
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | mean x: 1760313494.5
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | mean y: 2504151.4367088606
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | -- intersect: -425330894.70232886
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | intersect: -425330894.70232886
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | chi2: 1.4938743231115192
[2025-10-12 21:24:22] 2025-10-13 01:23:41,381 | INFO     | current chi2=1.4938743231115192 (change=33.99218844168066 %)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,382 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,382 | INFO     | sum of deviations: 385793402.00001085
[2025-10-12 21:24:22] 2025-10-13 01:23:41,382 | INFO     | mean x: 1760313342.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,382 | INFO     | mean y: 2504271.633986928
[2025-10-12 21:24:22] 2025-10-13 01:23:41,382 | INFO     | -- intersect: -609015654.5643857
[2025-10-12 21:24:22] 2025-10-13 01:23:41,383 | INFO     | intersect: -609015654.5643857
[2025-10-12 21:24:22] 2025-10-13 01:23:41,383 | INFO     | chi2: 1.4942204639559051
[2025-10-12 21:24:22] 2025-10-13 01:23:41,383 | INFO     | current chi2=1.4942204639559051 (change=-0.02317068035983972 %)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,383 | INFO     | right removable region: 152
[2025-10-12 21:24:22] 2025-10-13 01:23:41,383 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | sum of deviations: -33845276355.999992
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | mean x: 1760313799.5
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | mean y: 2519468.7721518986
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | -- intersect: 48716752628.22145
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | intersect: 48716752628.22145
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | chi2: 0.8921577685865058
[2025-10-12 21:24:22] 2025-10-13 01:23:41,384 | INFO     | current chi2=0.8921577685865058 (change=60.57942695842655 %)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,385 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,385 | INFO     | sum of deviations: -32288090071.999992
[2025-10-12 21:24:22] 2025-10-13 01:23:41,385 | INFO     | mean x: 1760313952.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,385 | INFO     | mean y: 2517280.3333333335
[2025-10-12 21:24:22] 2025-10-13 01:23:41,385 | INFO     | -- intersect: 51182286549.86829
[2025-10-12 21:24:22] 2025-10-13 01:23:41,386 | INFO     | intersect: 51182286549.86829
[2025-10-12 21:24:22] 2025-10-13 01:23:41,386 | INFO     | chi2: 0.8761625303021082
[2025-10-12 21:24:22] 2025-10-13 01:23:41,386 | INFO     | current chi2=0.8761625303021082 (change=1.7928710422753655 %)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,386 | INFO     | left removable region: 20
[2025-10-12 21:24:22] 2025-10-13 01:23:41,386 | INFO     | sum of square deviations: 713140813.0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | sum of deviations: -11115698190.5
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | mean x: 1760313921.5
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | mean y: 2517851.8863636362
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | -- intersect: 27440462666.20105
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | intersect: 27440462666.20105
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | chi2: 0.04289803676197857
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | -- intersect: 27440462666.20105
[2025-10-12 21:24:22] 2025-10-13 01:23:41,387 | INFO     | current memory leak: -15.59 B/s (using 132 data points, chi2=0.04)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | ..............................
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . Timing measurements:
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . get job = 0 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . initial setup = 2 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . payload setup = 4 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . stage-in = 0 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . payload execution = 9910 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . stage-out = 1 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,388 | INFO     | . log creation = 0 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,389 | INFO     | ..............................
[2025-10-12 21:24:22] 2025-10-13 01:23:41,549 | INFO     | 
[2025-10-12 21:24:22] 2025-10-13 01:23:41,550 | INFO     | job summary report
[2025-10-12 21:24:22] 2025-10-13 01:23:41,550 | INFO     | --------------------------------------------------
[2025-10-12 21:24:22] 2025-10-13 01:23:41,550 | INFO     | PanDA job id: 6840750047
[2025-10-12 21:24:22] 2025-10-13 01:23:41,550 | INFO     | task id: 46676269
[2025-10-12 21:24:22] 2025-10-13 01:23:41,550 | INFO     | errors: (none)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | pilot state: finished 
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | transexitcode: 0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | exeerrorcode: 0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | exeerrordiag: 
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | exitcode: 0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,551 | INFO     | exitmsg: OK
[2025-10-12 21:24:22] 2025-10-13 01:23:41,552 | INFO     | cpuconsumptiontime: 74783 s
[2025-10-12 21:24:22] 2025-10-13 01:23:41,552 | INFO     | nevents: 400
[2025-10-12 21:24:22] 2025-10-13 01:23:41,552 | INFO     | neventsw: 0
[2025-10-12 21:24:22] 2025-10-13 01:23:41,552 | INFO     | pid: 15935
[2025-10-12 21:24:22] 2025-10-13 01:23:41,552 | INFO     | pgrp: 15935
[2025-10-12 21:24:22] 2025-10-13 01:23:41,552 | INFO     | corecount: 8
[2025-10-12 21:24:22] 2025-10-13 01:23:41,553 | INFO     | event service: False
[2025-10-12 21:24:22] 2025-10-13 01:23:41,553 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 9919: 2377716, 9920: 2386714, 9921: 2386898, 9925: 2387156}
[2025-10-12 21:24:22] 2025-10-13 01:23:41,553 | INFO     | --------------------------------------------------
[2025-10-12 21:24:22] 2025-10-13 01:23:41,553 | INFO     | 
[2025-10-12 21:24:22] 2025-10-13 01:23:41,553 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 21:24:22] 2025-10-13 01:23:41,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | job 6840750047 has completed (purged errors)
[2025-10-12 21:24:22] 2025-10-13 01:23:41,579 | INFO     | overall cleanup function is called
[2025-10-12 21:24:22] 2025-10-13 01:23:42,587 | INFO     | --- collectZombieJob: --- 10, [15935]
[2025-10-12 21:24:22] 2025-10-13 01:23:42,587 | INFO     | zombie collector waiting for pid 15935
[2025-10-12 21:24:22] 2025-10-13 01:23:42,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:24:22] 2025-10-13 01:23:42,588 | INFO     | collected zombie processes
[2025-10-12 21:24:22] 2025-10-13 01:23:42,588 | INFO     | will attempt to kill all subprocesses of pid=15935
[2025-10-12 21:24:22] 2025-10-13 01:23:42,846 | INFO     | process IDs to be killed: [15935] (in reverse order)
[2025-10-12 21:24:22] 2025-10-13 01:23:42,926 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:24:22] 2025-10-13 01:23:42,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:24:22] 2025-10-13 01:23:42,932 | INFO     | did not find any defunct processes belonging to 15935
[2025-10-12 21:24:22] 2025-10-13 01:23:42,940 | INFO     | did not find any defunct processes belonging to 15935
[2025-10-12 21:24:22] 2025-10-13 01:23:42,941 | INFO     | ready for new job
[2025-10-12 21:24:22] 2025-10-13 01:23:42,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:24:22] 2025-10-13 01:23:42,943 | INFO     | ***************************************
[2025-10-12 21:24:22] 2025-10-13 01:23:42,943 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:24:22] 2025-10-13 01:23:42,943 | INFO     | ***************************************
[2025-10-12 21:24:22] 2025-10-13 01:23:42,943 | INFO     | 
[2025-10-12 21:24:22] 2025-10-13 01:23:42,945 | INFO     | architecture information:
[2025-10-12 21:24:22] 2025-10-13 01:23:42,946 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:24:22] 2025-10-13 01:23:42,959 | INFO     | cat /etc/os-release:
[2025-10-12 21:24:22] NAME="CentOS Linux"
[2025-10-12 21:24:22] VERSION="7 (Core)"
[2025-10-12 21:24:22] ID="centos"
[2025-10-12 21:24:22] ID_LIKE="rhel fedora"
[2025-10-12 21:24:22] VERSION_ID="7"
[2025-10-12 21:24:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:24:22] ANSI_COLOR="0;31"
[2025-10-12 21:24:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:24:22] HOME_URL="https://www.centos.org/"
[2025-10-12 21:24:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:24:22] 
[2025-10-12 21:24:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:24:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:24:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:24:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:24:22] 
[2025-10-12 21:24:22] 2025-10-13 01:23:42,960 | INFO     | ***************************************
[2025-10-12 21:24:22] 2025-10-13 01:23:43,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 21:24:22] 2025-10-13 01:23:43,502 | INFO     | sufficient remaining disk space (104927854592 B)
[2025-10-12 21:24:22] 2025-10-13 01:23:43,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:24:22] 2025-10-13 01:23:43,503 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:24:22] 2025-10-13 01:23:43,503 | INFO     | update_server=False
[2025-10-12 21:24:22] 2025-10-13 01:23:43,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:24:22] 2025-10-13 01:23:43,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:24:22] 2025-10-13 01:23:43,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:24:22] 2025-10-13 01:23:43,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:24:22] 2025-10-13 01:23:43,504 | INFO     | aborting loop
[2025-10-12 21:24:22] 2025-10-13 01:23:44,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:24:22] 2025-10-13 01:23:44,293 | INFO     | all data control threads have been joined
[2025-10-12 21:24:22] 2025-10-13 01:23:44,490 | INFO     | all payload control threads have been joined
[2025-10-12 21:24:22] 2025-10-13 01:23:44,509 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:44,509 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:44,509 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:44,779 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:44,780 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:44,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,191 | INFO     | all job control threads have been joined
[2025-10-12 21:24:22] 2025-10-13 01:23:45,298 | INFO     | [data] control thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,388 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,496 | INFO     | [payload] control thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,619 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,772 | INFO     | [job] validate thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:45,957 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:46,068 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:46,197 | INFO     | [job] control thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:23:47,511 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:24:22] 2025-10-13 01:24:13,151 | INFO     | PID=9245 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 21:24:22] 2025-10-13 01:24:13,152 | INFO     | .. there are 4 such processes running
[2025-10-12 21:24:22] 2025-10-13 01:24:13,153 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:24:22] 2025-10-13 01:24:13,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:24:22] 2025-10-13 01:24:13,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:24:22] 2025-10-13 01:24:17,172 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:24:22] 2025-10-13 01:24:17,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477796222784)>', '<ExcThread(monitor, started 140477215000320)>']
[2025-10-12 21:24:22] 2025-10-13 01:24:18,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:24:22] 2025-10-13 01:24:18,180 | INFO     | [monitor] control thread has ended
[2025-10-12 21:24:22] 2025-10-13 01:24:22,294 | INFO     | all workflow threads have been joined
[2025-10-12 21:24:22] 2025-10-13 01:24:22,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:24:22] 2025-10-13 01:24:22,295 | INFO     | traces error code: 0
[2025-10-12 21:24:22] 2025-10-13 01:24:22,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:24:22] 2025-10-13 01:24:22,416 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:24:22] 2025-10-13 01:24:22,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:24:22] 2025-10-13 01:24:22,425 [wrapper] pilotpid: 9245
[2025-10-12 21:24:22] 2025-10-13 01:24:22,428 [wrapper] Pilot exit status: 0
[2025-10-12 21:24:22] 2025-10-13 01:24:22,439 [wrapper] pandaids: 6840750047
[2025-10-12 21:24:22] 2025-10-13 01:24:22,502 [wrapper] cleanup supervisor_pilot 16890 9246
[2025-10-12 21:24:22] 2025-10-13 01:24:22,505 [wrapper] Test setup, not cleaning
[2025-10-12 21:24:22] 2025-10-13 01:24:22,507 [wrapper] apfmon messages muted
[2025-10-12 21:24:22] 2025-10-13 01:24:22,509 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:24:22] 2025-10-13 01:24:22,512 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:24:22]  *** Error codes and diagnostics ***
[2025-10-12 21:24:22]     "exeErrorCode": 0,
[2025-10-12 21:24:22]     "exeErrorDiag": "",
[2025-10-12 21:24:22]     "pilotErrorCode": 0,
[2025-10-12 21:24:22]     "pilotErrorDiag": "",
[2025-10-12 21:24:22]  *** Listing of results directory ***
[2025-10-12 21:24:22] total 410704
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-12 21:24:22] -rwx------ 1 boincer umatlas     36292 Oct 12 17:03 runpilot2-wrapper.sh
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:03 queuedata.json
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:24:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:37 run_atlas
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:37 job.xml
[2025-10-12 21:24:22] -rw-r--r-- 2 boincer umatlas 219364093 Oct 12 18:37 EVNT.46676267._004767.pool.root.1
[2025-10-12 21:24:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:37 start_atlas.sh
[2025-10-12 21:24:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:37 shared
[2025-10-12 21:24:22] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 18:37 input.tar.gz
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:37 boinc_lockfile
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 18:37 pandaJob.out
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas    975603 Oct 12 18:37 agis_schedconf.cvmfs.json
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas   1560580 Oct 12 18:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:24:22] drwx------ 5 boincer umatlas      4096 Oct 12 18:38 pilot3
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas      6035 Oct 12 21:19 init_data.xml
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas 193741321 Oct 12 21:23 HITS.46676269._089426.pool.root.1
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:23 boinc_task_state.xml
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas      1049 Oct 12 21:23 memory_monitor_summary.json
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas    394980 Oct 12 21:23 log.46676269._089426.job.log.tgz.1
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas      7839 Oct 12 21:23 heartbeat.json
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas        28 Oct 12 21:24 wrapper_checkpoint.txt
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:24 boinc_mmap_file
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas        95 Oct 12 21:24 pilot_heartbeat.json
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas      4821 Oct 12 21:24 pilotlog.txt
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas   1382285 Oct 12 21:24 log.46676269._089426.job.log.1
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas       357 Oct 12 21:24 output.list
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:24 runtime_log
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas   1792000 Oct 12 21:24 result.tar.gz
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas       657 Oct 12 21:24 sRmMDmwOIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSYlNDmfP8Ijm.diag
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas      8693 Oct 12 21:24 runtime_log.err
[2025-10-12 21:24:22] -rw-r--r-- 1 boincer umatlas     20870 Oct 12 21:24 stderr.txt
[2025-10-12 21:24:22] HITS file was successfully produced:
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas 193741321 Oct 12 21:23 shared/HITS.pool.root.1
[2025-10-12 21:24:22]  *** Contents of shared directory: ***
[2025-10-12 21:24:22] total 405760
[2025-10-12 21:24:22] -rw-r--r-- 2 boincer umatlas 219364093 Oct 12 18:37 ATLAS.root_0
[2025-10-12 21:24:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:37 start_atlas.sh
[2025-10-12 21:24:22] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 18:37 input.tar.gz
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas 193741321 Oct 12 21:23 HITS.pool.root.1
[2025-10-12 21:24:22] -rw------- 1 boincer umatlas   1792000 Oct 12 21:24 result.tar.gz
21:24:23 (5266): run_atlas exited; CPU time 75079.621472
21:24:23 (5266): called boinc_finish(0)

</stderr_txt>
]]>

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