Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:52:40 (17512): wrapper (7.7.26015): starting
02:52:40 (17512): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 02:52:40] Arguments: --nthreads 8
[2025-10-14 02:52:40] Threads: 8
[2025-10-14 02:52:40] Checking for CVMFS
[2025-10-14 02:52:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 02:52:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 02:52:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 02:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 02:52:42] 2.11.2.0 10662 20480 73524 151678 2 61 16743487 25165825 4632 130560 0 5987393 99.953 2533473 1811 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-14 02:52:42] CVMFS is ok
[2025-10-14 02:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 02:52:42] Checking for apptainer binary...
[2025-10-14 02:52:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 02:52:42] Running /usr/bin/apptainer --version
[2025-10-14 02:52:42] apptainer version 1.3.2-1.el7
[2025-10-14 02:52:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 02:52:46] cg-vwn346.simple-grid.lan
[2025-10-14 02:52:46] apptainer works
[2025-10-14 02:52:46] Set ATHENA_PROC_NUMBER=8
[2025-10-14 02:52:46] Set ATHENA_CORE_NUMBER=8
[2025-10-14 02:52:47] Starting ATLAS job with PandaID=6840750042
[2025-10-14 02:52:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 06:38:01]  *** The last 200 lines of the pilot log: ***
[2025-10-14 06:38:01] 2025-10-14 04:37:04,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 06:38:01] 2025-10-14 04:37:05,730 | INFO     | time since job start (13233s) is within the limit (172800.0s)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,278 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 06:38:01] 2025-10-14 04:37:06,279 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-14 06:38:01] 2025-10-14 04:37:06,280 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6840750042/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,281 | INFO     | extracted standard info from prmon json
[2025-10-14 06:38:01] 2025-10-14 04:37:06,281 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 06:38:01] 2025-10-14 04:37:06,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 06:38:01] 2025-10-14 04:37:06,282 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 06:38:01] 2025-10-14 04:37:06,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 06:38:01] 2025-10-14 04:37:06,286 | INFO     | fitting pss+swap vs Time
[2025-10-14 06:38:01] 2025-10-14 04:37:06,287 | INFO     | sum of square deviations: 2830787960.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,288 | INFO     | sum of deviations: 60149430883.99998
[2025-10-14 06:38:01] 2025-10-14 04:37:06,289 | INFO     | mean x: 1760410231.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,289 | INFO     | mean y: 2438142.4832535884
[2025-10-14 06:38:01] 2025-10-14 04:37:06,289 | INFO     | -- intersect: -37403285992.722176
[2025-10-14 06:38:01] 2025-10-14 04:37:06,289 | INFO     | intersect: -37403285992.722176
[2025-10-14 06:38:01] 2025-10-14 04:37:06,289 | INFO     | chi2: 4.463056293597892
[2025-10-14 06:38:01] 2025-10-14 04:37:06,290 | INFO     | sum of square deviations: 2632440055.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,291 | INFO     | sum of deviations: 72314336150.50002
[2025-10-14 06:38:01] 2025-10-14 04:37:06,292 | INFO     | mean x: 1760410078.5
[2025-10-14 06:38:01] 2025-10-14 04:37:06,292 | INFO     | mean y: 2447287.4460784313
[2025-10-14 06:38:01] 2025-10-14 04:37:06,292 | INFO     | -- intersect: -48356825296.01913
[2025-10-14 06:38:01] 2025-10-14 04:37:06,292 | INFO     | intersect: -48356825296.01913
[2025-10-14 06:38:01] 2025-10-14 04:37:06,292 | INFO     | chi2: 3.7091863343226175
[2025-10-14 06:38:01] 2025-10-14 04:37:06,292 | INFO     | current chi2=3.7091863343226175 (change=16.89133879751138 %)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,293 | INFO     | right removable region: 203
[2025-10-14 06:38:01] 2025-10-14 04:37:06,293 | INFO     | sum of square deviations: 2632440055.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,294 | INFO     | sum of deviations: -2539222752.5
[2025-10-14 06:38:01] 2025-10-14 04:37:06,295 | INFO     | mean x: 1760410383.5
[2025-10-14 06:38:01] 2025-10-14 04:37:06,295 | INFO     | mean y: 2486209.093137255
[2025-10-14 06:38:01] 2025-10-14 04:37:06,295 | INFO     | -- intersect: 1700558722.0949388
[2025-10-14 06:38:01] 2025-10-14 04:37:06,295 | INFO     | intersect: 1700558722.0949388
[2025-10-14 06:38:01] 2025-10-14 04:37:06,295 | INFO     | chi2: 0.8853843104904254
[2025-10-14 06:38:01] 2025-10-14 04:37:06,295 | INFO     | current chi2=0.8853843104904254 (change=80.16192823378722 %)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,296 | INFO     | sum of square deviations: 2443580700.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,297 | INFO     | sum of deviations: -6206025259.000001
[2025-10-14 06:38:01] 2025-10-14 04:37:06,297 | INFO     | mean x: 1760410536.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,297 | INFO     | mean y: 2489076.5879396987
[2025-10-14 06:38:01] 2025-10-14 04:37:06,297 | INFO     | -- intersect: 4473449357.386413
[2025-10-14 06:38:01] 2025-10-14 04:37:06,297 | INFO     | intersect: 4473449357.386413
[2025-10-14 06:38:01] 2025-10-14 04:37:06,298 | INFO     | chi2: 0.8166723134919123
[2025-10-14 06:38:01] 2025-10-14 04:37:06,298 | INFO     | current chi2=0.8166723134919123 (change=7.760697381282116 %)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,298 | INFO     | left removable region: 20
[2025-10-14 06:38:01] 2025-10-14 04:37:06,299 | INFO     | sum of square deviations: 1900284932.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,300 | INFO     | sum of deviations: 5374698959.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,300 | INFO     | mean x: 1760410658.0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,300 | INFO     | mean y: 2501371.043715847
[2025-10-14 06:38:01] 2025-10-14 04:37:06,300 | INFO     | -- intersect: -4976582118.823742
[2025-10-14 06:38:01] 2025-10-14 04:37:06,301 | INFO     | intersect: -4976582118.823742
[2025-10-14 06:38:01] 2025-10-14 04:37:06,301 | INFO     | chi2: 0.0004950533364654895
[2025-10-14 06:38:01] 2025-10-14 04:37:06,301 | INFO     | -- intersect: -4976582118.823742
[2025-10-14 06:38:01] 2025-10-14 04:37:06,301 | INFO     | current memory leak: 2.83 B/s (using 183 data points, chi2=0.00)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | ..............................
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | . Timing measurements:
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | . get job = 0 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | . initial setup = 11 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | . payload setup = 132 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,302 | INFO     | . stage-in = 0 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,303 | INFO     | . payload execution = 12896 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,303 | INFO     | . stage-out = 1 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,303 | INFO     | . log creation = 0 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,303 | INFO     | ..............................
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | 
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | job summary report
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | --------------------------------------------------
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | PanDA job id: 6840750042
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | task id: 46676269
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | errors: (none)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | pilot state: finished 
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | transexitcode: 0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | exeerrorcode: 0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | exeerrordiag: 
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | exitcode: 0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | exitmsg: OK
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | cpuconsumptiontime: 48419 s
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | nevents: 400
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | neventsw: 0
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | pid: 27828
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | pgrp: 27828
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | corecount: 8
[2025-10-14 06:38:01] 2025-10-14 04:37:06,816 | INFO     | event service: False
[2025-10-14 06:38:01] 2025-10-14 04:37:06,817 | INFO     | sizes: {0: 2348852, 1: 2348852, 12: 2348880, 22: 2348908, 33: 2348936, 44: 2348992, 54: 2349148, 65: 2349176, 76: 2349204, 87: 2349260, 93: 2349550, 97: 2349858, 1
[2025-10-14 06:38:01] 2025-10-14 04:37:06,817 | INFO     | --------------------------------------------------
[2025-10-14 06:38:01] 2025-10-14 04:37:06,817 | INFO     | 
[2025-10-14 06:38:01] 2025-10-14 04:37:06,817 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-14 06:38:01] 2025-10-14 04:37:06,851 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 06:38:01] 2025-10-14 04:37:06,854 | INFO     | job 6840750042 has completed (purged errors)
[2025-10-14 06:38:01] 2025-10-14 04:37:06,854 | INFO     | overall cleanup function is called
[2025-10-14 06:38:01] 2025-10-14 04:37:07,863 | INFO     | --- collectZombieJob: --- 10, [27828]
[2025-10-14 06:38:01] 2025-10-14 04:37:07,863 | INFO     | zombie collector waiting for pid 27828
[2025-10-14 06:38:01] 2025-10-14 04:37:07,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 06:38:01] 2025-10-14 04:37:07,863 | INFO     | collected zombie processes
[2025-10-14 06:38:01] 2025-10-14 04:37:07,863 | INFO     | will attempt to kill all subprocesses of pid=27828
[2025-10-14 06:38:01] 2025-10-14 04:37:07,944 | INFO     | process IDs to be killed: [27828] (in reverse order)
[2025-10-14 06:38:01] 2025-10-14 04:37:08,001 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 06:38:01] 2025-10-14 04:37:08,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 06:38:01] 2025-10-14 04:37:08,004 | INFO     | did not find any defunct processes belonging to 27828
[2025-10-14 06:38:01] 2025-10-14 04:37:08,007 | INFO     | did not find any defunct processes belonging to 27828
[2025-10-14 06:38:01] 2025-10-14 04:37:08,008 | INFO     | ready for new job
[2025-10-14 06:38:01] 2025-10-14 04:37:08,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 06:38:01] 2025-10-14 04:37:08,010 | INFO     | ***************************************
[2025-10-14 06:38:01] 2025-10-14 04:37:08,010 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 06:38:01] 2025-10-14 04:37:08,010 | INFO     | ***************************************
[2025-10-14 06:38:01] 2025-10-14 04:37:08,010 | INFO     | 
[2025-10-14 06:38:01] 2025-10-14 04:37:08,010 | INFO     | pilot is running in a VM
[2025-10-14 06:38:01] 2025-10-14 04:37:08,011 | INFO     | architecture information:
[2025-10-14 06:38:01] 2025-10-14 04:37:08,011 | INFO     | executing command: cat /etc/os-release
[2025-10-14 06:38:01] 2025-10-14 04:37:08,032 | INFO     | cat /etc/os-release:
[2025-10-14 06:38:01] NAME="CentOS Linux"
[2025-10-14 06:38:01] VERSION="7 (Core)"
[2025-10-14 06:38:01] ID="centos"
[2025-10-14 06:38:01] ID_LIKE="rhel fedora"
[2025-10-14 06:38:01] VERSION_ID="7"
[2025-10-14 06:38:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 06:38:01] ANSI_COLOR="0;31"
[2025-10-14 06:38:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 06:38:01] HOME_URL="https://www.centos.org/"
[2025-10-14 06:38:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 06:38:01] 
[2025-10-14 06:38:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 06:38:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 06:38:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 06:38:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 06:38:01] 
[2025-10-14 06:38:01] 2025-10-14 04:37:08,033 | INFO     | ***************************************
[2025-10-14 06:38:01] 2025-10-14 04:37:08,534 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-14 06:38:01] 2025-10-14 04:37:08,552 | INFO     | sufficient remaining disk space (495665020928 B)
[2025-10-14 06:38:01] 2025-10-14 04:37:08,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 06:38:01] 2025-10-14 04:37:08,552 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 06:38:01] 2025-10-14 04:37:08,552 | INFO     | update_server=False
[2025-10-14 06:38:01] 2025-10-14 04:37:08,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 06:38:01] 2025-10-14 04:37:08,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 06:38:01] 2025-10-14 04:37:08,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:38:01] 2025-10-14 04:37:08,556 | INFO     | aborting loop
[2025-10-14 06:38:01] 2025-10-14 04:37:08,645 | INFO     | all data control threads have been joined
[2025-10-14 06:38:01] 2025-10-14 04:37:09,016 | INFO     | all job control threads have been joined
[2025-10-14 06:38:01] 2025-10-14 04:37:09,558 | INFO     | [job] retrieve thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:09,561 | INFO     | [job] job monitor thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:09,650 | INFO     | [data] control thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:09,757 | INFO     | all payload control threads have been joined
[2025-10-14 06:38:01] 2025-10-14 04:37:09,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:09,887 | INFO     | [payload] failed_post thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,022 | INFO     | [job] control thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,122 | INFO     | [payload] validate_post thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,176 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,354 | INFO     | [data] copytool_in thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,369 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,559 | INFO     | [data] copytool_out thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,648 | INFO     | [job] validate thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,762 | INFO     | [payload] control thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:10,864 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:11,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 06:38:01] 2025-10-14 04:37:11,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 06:38:01] 2025-10-14 04:37:12,429 | INFO     | [job] queue monitor thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:15,575 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 06:38:01] 2025-10-14 04:37:38,894 | INFO     | PID=21261 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 06:38:01] 2025-10-14 04:37:38,894 | INFO     | .. there are 9 such processes running
[2025-10-14 06:38:01] 2025-10-14 04:37:38,896 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 06:38:01] 2025-10-14 04:37:38,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 06:38:01] 2025-10-14 04:37:38,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 06:38:01] 2025-10-14 04:37:54,505 | INFO     | [monitor] cgroup control has ended
[2025-10-14 06:38:01] 2025-10-14 04:37:55,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186198939456)>', '<ExcThread(monitor, started 140185752811264)>']
[2025-10-14 06:38:01] 2025-10-14 04:37:55,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 06:38:01] 2025-10-14 04:37:55,967 | INFO     | [monitor] control thread has ended
[2025-10-14 06:38:01] 2025-10-14 04:38:00,786 | INFO     | all workflow threads have been joined
[2025-10-14 06:38:01] 2025-10-14 04:38:00,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 06:38:01] 2025-10-14 04:38:00,786 | INFO     | traces error code: 0
[2025-10-14 06:38:01] 2025-10-14 04:38:00,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 06:38:01] 2025-10-14 04:38:00,947 [wrapper] ==== pilot stdout END ====
[2025-10-14 06:38:01] 2025-10-14 04:38:00,953 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 06:38:01] 2025-10-14 04:38:00,959 [wrapper] pilotpid: 21261
[2025-10-14 06:38:01] 2025-10-14 04:38:00,963 [wrapper] Pilot exit status: 0
[2025-10-14 06:38:01] 2025-10-14 04:38:01,013 [wrapper] pandaids: 6840750042
[2025-10-14 06:38:01] 2025-10-14 04:38:01,069 [wrapper] cleanup supervisor_pilot 19063 21262
[2025-10-14 06:38:01] 2025-10-14 04:38:01,075 [wrapper] Test setup, not cleaning
[2025-10-14 06:38:01] 2025-10-14 04:38:01,080 [wrapper] apfmon messages muted
[2025-10-14 06:38:01] 2025-10-14 04:38:01,083 [wrapper] ==== wrapper stdout END ====
[2025-10-14 06:38:01] 2025-10-14 04:38:01,086 [wrapper] ==== wrapper stderr END ====
[2025-10-14 06:38:01]  *** Error codes and diagnostics ***
[2025-10-14 06:38:01]     "exeErrorCode": 0,
[2025-10-14 06:38:01]     "exeErrorDiag": "",
[2025-10-14 06:38:01]     "pilotErrorCode": 0,
[2025-10-14 06:38:01]     "pilotErrorDiag": "",
[2025-10-14 06:38:01]  *** Listing of results directory ***
[2025-10-14 06:38:01] total 415500
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc    557409 Oct 12 22:55 pilot3.tar.gz
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc      5112 Oct 12 23:00 queuedata.json
[2025-10-14 06:38:01] -rwx------. 1 boinc boinc     36292 Oct 12 23:02 runpilot2-wrapper.sh
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc       100 Oct 14 02:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 06:38:01] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 02:52 run_atlas
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc       105 Oct 14 02:52 job.xml
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc      6388 Oct 14 02:52 init_data.xml
[2025-10-14 06:38:01] -rw-r--r--. 2 boinc boinc 219364093 Oct 14 02:52 EVNT.46676267._004767.pool.root.1
[2025-10-14 06:38:01] -rw-r--r--. 2 boinc boinc     15120 Oct 14 02:52 start_atlas.sh
[2025-10-14 06:38:01] drwxrwx--x. 2 boinc boinc        68 Oct 14 02:52 shared
[2025-10-14 06:38:01] -rw-r--r--. 2 boinc boinc    569678 Oct 14 02:52 input.tar.gz
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc         0 Oct 14 02:52 boinc_lockfile
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc      2547 Oct 14 02:52 pandaJob.out
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc    972807 Oct 14 02:56 agis_schedconf.cvmfs.json
[2025-10-14 06:38:01] drwx------. 5 boinc boinc      4096 Oct 14 02:56 pilot3
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc 197800340 Oct 14 06:36 HITS.46676269._089421.pool.root.1
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc       531 Oct 14 06:36 boinc_task_state.xml
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc      1014 Oct 14 06:36 memory_monitor_summary.json
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc   1560580 Oct 14 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc    427035 Oct 14 06:36 log.46676269._089421.job.log.tgz.1
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc      7773 Oct 14 06:37 heartbeat.json
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc        95 Oct 14 06:37 pilot_heartbeat.json
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc      8192 Oct 14 06:37 boinc_mmap_file
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc        28 Oct 14 06:37 wrapper_checkpoint.txt
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc      4885 Oct 14 06:38 pilotlog.txt
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc   1781452 Oct 14 06:38 log.46676269._089421.job.log.1
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc       357 Oct 14 06:38 output.list
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc       620 Oct 14 06:38 runtime_log
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc   2232320 Oct 14 06:38 result.tar.gz
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc      8717 Oct 14 06:38 runtime_log.err
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc       656 Oct 14 06:38 MM3LDmnNIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcXlNDmHrbc7n.diag
[2025-10-14 06:38:01] -rw-r--r--. 1 boinc boinc     20814 Oct 14 06:38 stderr.txt
[2025-10-14 06:38:01] HITS file was successfully produced:
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc 197800340 Oct 14 06:36 shared/HITS.pool.root.1
[2025-10-14 06:38:01]  *** Contents of shared directory: ***
[2025-10-14 06:38:01] total 410148
[2025-10-14 06:38:01] -rw-r--r--. 2 boinc boinc 219364093 Oct 14 02:52 ATLAS.root_0
[2025-10-14 06:38:01] -rw-r--r--. 2 boinc boinc     15120 Oct 14 02:52 start_atlas.sh
[2025-10-14 06:38:01] -rw-r--r--. 2 boinc boinc    569678 Oct 14 02:52 input.tar.gz
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc 197800340 Oct 14 06:36 HITS.pool.root.1
[2025-10-14 06:38:01] -rw-------. 1 boinc boinc   2232320 Oct 14 06:38 result.tar.gz
06:38:02 (17512): run_atlas exited; CPU time 48573.003017
06:38:02 (17512): called boinc_finish(0)

</stderr_txt>
]]>

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