Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:17 (24582): wrapper (7.7.26015): starting
18:37:17 (24582): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:37:17] Arguments: --nthreads 8
[2025-10-12 18:37:17] Threads: 8
[2025-10-12 18:37:17] Checking for CVMFS
[2025-10-12 18:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:37:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:37:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:37:17] 2.11.2.0 2797 1523 64676 151640 3 59 13879947 20275200 1 130560 0 1092800 99.990 54339 35678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:37:17] CVMFS is ok
[2025-10-12 18:37:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:37:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:37:17] Further information can be found at the LHC@home message board.
[2025-10-12 18:37:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:37:17] Checking for apptainer binary...
[2025-10-12 18:37:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:37:17] Running /usr/bin/apptainer --version
[2025-10-12 18:37:18] apptainer version 1.3.2-1.el7
[2025-10-12 18:37:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:37:19] c-204-11.aglt2.org
[2025-10-12 18:37:19] apptainer works
[2025-10-12 18:37:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:37:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:37:19] Starting ATLAS job with PandaID=6840537665
[2025-10-12 18:37:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:35:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:35:54] 2025-10-13 00:35:12,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:35:54] 2025-10-13 00:35:12,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:35:54] 2025-10-13 00:35:12,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:35:54] 2025-10-13 00:35:12,356 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:35:54] 2025-10-13 00:35:12,357 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,358 | INFO     | sum of deviations: -3371180432.9999976
[2025-10-12 20:35:54] 2025-10-13 00:35:12,358 | INFO     | mean x: 1760312164.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,358 | INFO     | mean y: 2578035.7739130436
[2025-10-12 20:35:54] 2025-10-13 00:35:12,358 | INFO     | -- intersect: 12586980024.051226
[2025-10-12 20:35:54] 2025-10-13 00:35:12,358 | INFO     | intersect: 12586980024.051226
[2025-10-12 20:35:54] 2025-10-13 00:35:12,359 | INFO     | chi2: 1.6320197905313576
[2025-10-12 20:35:54] 2025-10-13 00:35:12,359 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 20:35:54] 2025-10-13 00:35:12,360 | INFO     | sum of deviations: -2472967358.5000014
[2025-10-12 20:35:54] 2025-10-13 00:35:12,360 | INFO     | mean x: 1760312011.5
[2025-10-12 20:35:54] 2025-10-13 00:35:12,360 | INFO     | mean y: 2580364.0636363635
[2025-10-12 20:35:54] 2025-10-13 00:35:12,360 | INFO     | -- intersect: 10551001263.646135
[2025-10-12 20:35:54] 2025-10-13 00:35:12,360 | INFO     | intersect: 10551001263.646135
[2025-10-12 20:35:54] 2025-10-13 00:35:12,360 | INFO     | chi2: 1.6341599101862405
[2025-10-12 20:35:54] 2025-10-13 00:35:12,361 | INFO     | current chi2=1.6341599101862405 (change=-0.1311331925813311 %)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,361 | INFO     | right removable region: 109
[2025-10-12 20:35:54] 2025-10-13 00:35:12,361 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 20:35:54] 2025-10-13 00:35:12,362 | INFO     | sum of deviations: -21096431692.499996
[2025-10-12 20:35:54] 2025-10-13 00:35:12,362 | INFO     | mean x: 1760312316.5
[2025-10-12 20:35:54] 2025-10-13 00:35:12,362 | INFO     | mean y: 2623054.0090909093
[2025-10-12 20:35:54] 2025-10-13 00:35:12,362 | INFO     | -- intersect: 89989285742.53877
[2025-10-12 20:35:54] 2025-10-13 00:35:12,362 | INFO     | intersect: 89989285742.53877
[2025-10-12 20:35:54] 2025-10-13 00:35:12,362 | INFO     | chi2: 0.1286522576703146
[2025-10-12 20:35:54] 2025-10-13 00:35:12,363 | INFO     | current chi2=0.1286522576703146 (change=92.11699156978803 %)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,363 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,363 | INFO     | sum of deviations: -21177993725.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,363 | INFO     | mean x: 1760312469.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,364 | INFO     | mean y: 2623123.533333333
[2025-10-12 20:35:54] 2025-10-13 00:35:12,364 | INFO     | -- intersect: 103867247049.48337
[2025-10-12 20:35:54] 2025-10-13 00:35:12,364 | INFO     | intersect: 103867247049.48337
[2025-10-12 20:35:54] 2025-10-13 00:35:12,364 | INFO     | chi2: 0.09294746619697526
[2025-10-12 20:35:54] 2025-10-13 00:35:12,364 | INFO     | current chi2=0.09294746619697526 (change=27.752945902307246 %)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,364 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,365 | INFO     | sum of deviations: -18725444957.5
[2025-10-12 20:35:54] 2025-10-13 00:35:12,365 | INFO     | mean x: 1760312621.5
[2025-10-12 20:35:54] 2025-10-13 00:35:12,365 | INFO     | mean y: 2615451.29
[2025-10-12 20:35:54] 2025-10-13 00:35:12,365 | INFO     | -- intersect: 106315758247.07706
[2025-10-12 20:35:54] 2025-10-13 00:35:12,365 | INFO     | intersect: 106315758247.07706
[2025-10-12 20:35:54] 2025-10-13 00:35:12,366 | INFO     | chi2: 0.09235872039298607
[2025-10-12 20:35:54] 2025-10-13 00:35:12,366 | INFO     | current chi2=0.09235872039298607 (change=0.6334178090896205 %)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,366 | INFO     | left removable region: 30
[2025-10-12 20:35:54] 2025-10-13 00:35:12,366 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,367 | INFO     | sum of deviations: -9229392171.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,367 | INFO     | mean x: 1760312896.0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,367 | INFO     | mean y: 2586279.594936709
[2025-10-12 20:35:54] 2025-10-13 00:35:12,367 | INFO     | -- intersect: 106287803846.91095
[2025-10-12 20:35:54] 2025-10-13 00:35:12,367 | INFO     | intersect: 106287803846.91095
[2025-10-12 20:35:54] 2025-10-13 00:35:12,367 | INFO     | chi2: 0.0812145041526281
[2025-10-12 20:35:54] 2025-10-13 00:35:12,368 | INFO     | -- intersect: 106287803846.91095
[2025-10-12 20:35:54] 2025-10-13 00:35:12,368 | INFO     | current memory leak: -60.38 B/s (using 79 data points, chi2=0.08)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,368 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,368 | INFO     | ..............................
[2025-10-12 20:35:54] 2025-10-13 00:35:12,368 | INFO     | . Timing measurements:
[2025-10-12 20:35:54] 2025-10-13 00:35:12,368 | INFO     | . get job = 0 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | . initial setup = 2 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | . payload setup = 8 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | . stage-in = 0 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | . payload execution = 7017 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | . stage-out = 0 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | . log creation = 0 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,369 | INFO     | ..............................
[2025-10-12 20:35:54] 2025-10-13 00:35:12,476 | INFO     | 
[2025-10-12 20:35:54] 2025-10-13 00:35:12,477 | INFO     | job summary report
[2025-10-12 20:35:54] 2025-10-13 00:35:12,477 | INFO     | --------------------------------------------------
[2025-10-12 20:35:54] 2025-10-13 00:35:12,477 | INFO     | PanDA job id: 6840537665
[2025-10-12 20:35:54] 2025-10-13 00:35:12,477 | INFO     | task id: 46676269
[2025-10-12 20:35:54] 2025-10-13 00:35:12,478 | INFO     | errors: (none)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:35:54] 2025-10-13 00:35:12,478 | INFO     | pilot state: finished 
[2025-10-12 20:35:54] 2025-10-13 00:35:12,478 | INFO     | transexitcode: 0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,478 | INFO     | exeerrorcode: 0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,478 | INFO     | exeerrordiag: 
[2025-10-12 20:35:54] 2025-10-13 00:35:12,479 | INFO     | exitcode: 0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,479 | INFO     | exitmsg: OK
[2025-10-12 20:35:54] 2025-10-13 00:35:12,479 | INFO     | cpuconsumptiontime: 52153 s
[2025-10-12 20:35:54] 2025-10-13 00:35:12,479 | INFO     | nevents: 400
[2025-10-12 20:35:54] 2025-10-13 00:35:12,479 | INFO     | neventsw: 0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,479 | INFO     | pid: 2335
[2025-10-12 20:35:54] 2025-10-13 00:35:12,480 | INFO     | pgrp: 2335
[2025-10-12 20:35:54] 2025-10-13 00:35:12,480 | INFO     | corecount: 8
[2025-10-12 20:35:54] 2025-10-13 00:35:12,480 | INFO     | event service: False
[2025-10-12 20:35:54] 2025-10-13 00:35:12,480 | INFO     | sizes: {0: 2348856, 1: 2348856, 6: 2349146, 11: 2349174, 7028: 2376367, 7029: 2385365, 7030: 2385549, 7039: 2385743}
[2025-10-12 20:35:54] 2025-10-13 00:35:12,480 | INFO     | --------------------------------------------------
[2025-10-12 20:35:54] 2025-10-13 00:35:12,480 | INFO     | 
[2025-10-12 20:35:54] 2025-10-13 00:35:12,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:35:54] 2025-10-13 00:35:12,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:35:54] 2025-10-13 00:35:12,513 | INFO     | job 6840537665 has completed (purged errors)
[2025-10-12 20:35:54] 2025-10-13 00:35:12,513 | INFO     | overall cleanup function is called
[2025-10-12 20:35:54] 2025-10-13 00:35:13,521 | INFO     | --- collectZombieJob: --- 10, [2335]
[2025-10-12 20:35:54] 2025-10-13 00:35:13,522 | INFO     | zombie collector waiting for pid 2335
[2025-10-12 20:35:54] 2025-10-13 00:35:13,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:35:54] 2025-10-13 00:35:13,522 | INFO     | collected zombie processes
[2025-10-12 20:35:54] 2025-10-13 00:35:13,522 | INFO     | will attempt to kill all subprocesses of pid=2335
[2025-10-12 20:35:54] 2025-10-13 00:35:13,613 | INFO     | process IDs to be killed: [2335] (in reverse order)
[2025-10-12 20:35:54] 2025-10-13 00:35:13,670 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:35:54] 2025-10-13 00:35:13,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:35:54] 2025-10-13 00:35:13,674 | INFO     | did not find any defunct processes belonging to 2335
[2025-10-12 20:35:54] 2025-10-13 00:35:13,677 | INFO     | did not find any defunct processes belonging to 2335
[2025-10-12 20:35:54] 2025-10-13 00:35:13,677 | INFO     | ready for new job
[2025-10-12 20:35:54] 2025-10-13 00:35:13,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:35:54] 2025-10-13 00:35:13,679 | INFO     | ***************************************
[2025-10-12 20:35:54] 2025-10-13 00:35:13,679 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:35:54] 2025-10-13 00:35:13,680 | INFO     | ***************************************
[2025-10-12 20:35:54] 2025-10-13 00:35:13,680 | INFO     | 
[2025-10-12 20:35:54] 2025-10-13 00:35:13,680 | INFO     | architecture information:
[2025-10-12 20:35:54] 2025-10-13 00:35:13,681 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:35:54] 2025-10-13 00:35:13,702 | INFO     | cat /etc/os-release:
[2025-10-12 20:35:54] NAME="CentOS Linux"
[2025-10-12 20:35:54] VERSION="7 (Core)"
[2025-10-12 20:35:54] ID="centos"
[2025-10-12 20:35:54] ID_LIKE="rhel fedora"
[2025-10-12 20:35:54] VERSION_ID="7"
[2025-10-12 20:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:35:54] ANSI_COLOR="0;31"
[2025-10-12 20:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:35:54] HOME_URL="https://www.centos.org/"
[2025-10-12 20:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:35:54] 
[2025-10-12 20:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:35:54] 
[2025-10-12 20:35:54] 2025-10-13 00:35:13,702 | INFO     | ***************************************
[2025-10-12 20:35:54] 2025-10-13 00:35:14,205 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:35:54] 2025-10-13 00:35:14,228 | INFO     | sufficient remaining disk space (18595446784 B)
[2025-10-12 20:35:54] 2025-10-13 00:35:14,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:35:54] 2025-10-13 00:35:14,229 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:35:54] 2025-10-13 00:35:14,229 | INFO     | update_server=False
[2025-10-12 20:35:54] 2025-10-13 00:35:14,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:35:54] 2025-10-13 00:35:14,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:35:54] 2025-10-13 00:35:14,230 | INFO     | aborting loop
[2025-10-12 20:35:54] 2025-10-13 00:35:14,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:35:54] 2025-10-13 00:35:14,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:35:54] 2025-10-13 00:35:14,436 | INFO     | all job control threads have been joined
[2025-10-12 20:35:54] 2025-10-13 00:35:14,540 | INFO     | all data control threads have been joined
[2025-10-12 20:35:54] 2025-10-13 00:35:14,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:35:54] 2025-10-13 00:35:15,235 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:15,236 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:15,237 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:15,280 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:15,442 | INFO     | [job] control thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:15,445 | INFO     | all payload control threads have been joined
[2025-10-12 20:35:54] 2025-10-13 00:35:15,545 | INFO     | [data] control thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:15,920 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,023 | INFO     | [job] validate thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,223 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,228 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,233 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,450 | INFO     | [payload] control thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,495 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:16,692 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:18,582 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:24,838 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:35:54] 2025-10-13 00:35:25,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:35:54] 2025-10-13 00:35:44,419 | INFO     | PID=28251 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:35:54] 2025-10-13 00:35:44,419 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:35:54] 2025-10-13 00:35:44,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:35:54] 2025-10-13 00:35:44,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:35:54] 2025-10-13 00:35:47,672 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:35:54] 2025-10-13 00:35:49,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270744897344)>', '<ExcThread(monitor, started 140269831825152)>']
[2025-10-12 20:35:54] 2025-10-13 00:35:49,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:35:54] 2025-10-13 00:35:49,443 | INFO     | [monitor] control thread has ended
[2025-10-12 20:35:54] 2025-10-13 00:35:54,228 | INFO     | all workflow threads have been joined
[2025-10-12 20:35:54] 2025-10-13 00:35:54,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:35:54] 2025-10-13 00:35:54,229 | INFO     | traces error code: 0
[2025-10-12 20:35:54] 2025-10-13 00:35:54,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:35:54] 2025-10-13 00:35:54,344 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:35:54] 2025-10-13 00:35:54,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:35:54] 2025-10-13 00:35:54,353 [wrapper] pilotpid: 28251
[2025-10-12 20:35:54] 2025-10-13 00:35:54,357 [wrapper] Pilot exit status: 0
[2025-10-12 20:35:54] 2025-10-13 00:35:54,376 [wrapper] pandaids: 6840537665
[2025-10-12 20:35:54] 2025-10-13 00:35:54,426 [wrapper] cleanup supervisor_pilot 15617 28252
[2025-10-12 20:35:54] 2025-10-13 00:35:54,431 [wrapper] Test setup, not cleaning
[2025-10-12 20:35:54] 2025-10-13 00:35:54,435 [wrapper] apfmon messages muted
[2025-10-12 20:35:54] 2025-10-13 00:35:54,440 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:35:54] 2025-10-13 00:35:54,444 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:35:54]  *** Error codes and diagnostics ***
[2025-10-12 20:35:54]     "exeErrorCode": 0,
[2025-10-12 20:35:54]     "exeErrorDiag": "",
[2025-10-12 20:35:54]     "pilotErrorCode": 0,
[2025-10-12 20:35:54]     "pilotErrorDiag": "",
[2025-10-12 20:35:54]  *** Listing of results directory ***
[2025-10-12 20:35:54] total 406700
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 20:35:54] -rwx------ 1 boincer umatlas     36292 Oct 12 14:58 runpilot2-wrapper.sh
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:58 queuedata.json
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas       100 Oct 12 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:35:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 18:37 run_atlas
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas       105 Oct 12 18:37 job.xml
[2025-10-12 20:35:54] -rw-r--r-- 2 boincer umatlas 220604350 Oct 12 18:37 EVNT.46676267._004432.pool.root.1
[2025-10-12 20:35:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:37 start_atlas.sh
[2025-10-12 20:35:54] drwxrwx--x 2 boincer umatlas      4096 Oct 12 18:37 shared
[2025-10-12 20:35:54] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 18:37 input.tar.gz
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas         0 Oct 12 18:37 boinc_lockfile
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 18:37 pandaJob.out
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas    975603 Oct 12 18:37 agis_schedconf.cvmfs.json
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas   1560580 Oct 12 18:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:35:54] drwx------ 5 boincer umatlas      4096 Oct 12 18:37 pilot3
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 20:28 init_data.xml
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas 189255104 Oct 12 20:34 HITS.46676269._086812.pool.root.1
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas       529 Oct 12 20:34 boinc_task_state.xml
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas      1049 Oct 12 20:34 memory_monitor_summary.json
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas    356096 Oct 12 20:35 log.46676269._086812.job.log.tgz.1
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas      7851 Oct 12 20:35 heartbeat.json
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas        95 Oct 12 20:35 pilot_heartbeat.json
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas        27 Oct 12 20:35 wrapper_checkpoint.txt
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:35 boinc_mmap_file
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas      4818 Oct 12 20:35 pilotlog.txt
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas    994030 Oct 12 20:35 log.46676269._086812.job.log.1
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas       357 Oct 12 20:35 output.list
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:35 runtime_log
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas   1372160 Oct 12 20:35 result.tar.gz
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 20:35 runtime_log.err
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas       659 Oct 12 20:35 mPINDmOSGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRjUMDmbu1ddm.diag
[2025-10-12 20:35:54] -rw-r--r-- 1 boincer umatlas     20843 Oct 12 20:35 stderr.txt
[2025-10-12 20:35:54] HITS file was successfully produced:
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas 189255104 Oct 12 20:34 shared/HITS.pool.root.1
[2025-10-12 20:35:54]  *** Contents of shared directory: ***
[2025-10-12 20:35:54] total 402176
[2025-10-12 20:35:54] -rw-r--r-- 2 boincer umatlas 220604350 Oct 12 18:37 ATLAS.root_0
[2025-10-12 20:35:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 18:37 start_atlas.sh
[2025-10-12 20:35:54] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 18:37 input.tar.gz
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas 189255104 Oct 12 20:34 HITS.pool.root.1
[2025-10-12 20:35:54] -rw------- 1 boincer umatlas   1372160 Oct 12 20:35 result.tar.gz
20:35:56 (24582): run_atlas exited; CPU time 52168.343458
20:35:56 (24582): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN