Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:09:30 (2441193): wrapper (7.7.26015): starting
16:09:30 (2441193): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:09:30] Arguments: --nthreads 12
[2025-10-12 16:09:30] Threads: 12
[2025-10-12 16:09:30] Checking for CVMFS
[2025-10-12 16:09:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:09:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:09:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:09:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:09:31] 2.11.5.0 2838 32096 201900 151640 1 478 35180313 45568000 18517 130560 0 334823833 99.852 148725904 26772 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 16:09:31] CVMFS is ok
[2025-10-12 16:09:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:09:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:09:31] Further information can be found at the LHC@home message board.
[2025-10-12 16:09:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:09:31] Checking for apptainer binary...
[2025-10-12 16:09:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:09:31] Running /usr/bin/apptainer --version
[2025-10-12 16:09:31] apptainer version 1.4.1-1.el9
[2025-10-12 16:09:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:09:32] wns0073.triumf.lcg
[2025-10-12 16:09:32] apptainer works
[2025-10-12 16:09:32] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:09:32] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:09:32] Starting ATLAS job with PandaID=6840749871
[2025-10-12 16:09:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:14:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | wrong length of table data, x=[1760310653.0], y=[1539.0] (must be same and length>=4)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | could have reported an average CPU frequency of 2566 MHz (4 samples)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | ..............................
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . Timing measurements:
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . get job = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . initial setup = 3 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . payload setup = 12 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . stage-in = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . payload execution = 41 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . stage-out = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . log creation = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | ..............................
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:14:04] 2025-10-12 23:13:32,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840749871/pilotlog.txt
[2025-10-12 16:14:04] 2025-10-12 23:13:32,555 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 16:14:04] - Log from pilotlog.txt -
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840749871/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | INFO     | extracted standard info from prmon json
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | wrong length of table data, x=[1760310653.0], y=[1539.0] (must be same and length>=4)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | could have reported an average CPU frequency of 2566 MHz (4 samples)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | ..............................
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . Timing measurements:
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . get job = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . initial setup = 3 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . payload setup = 12 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . stage-in = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . payload execution = 41 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . stage-out = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . log creation = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | ..............................
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:14:04] 2025-10-12 23:13:32,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840749871/pilotlog.txt
[2025-10-12 16:14:04] 2025-10-12 23:13:32,555 | WARNING  | 
[2025-10-12 16:14:04] [begin log extracts]
[2025-10-12 16:14:04] - Log from pilotlog.txt -
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840749871/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | INFO     | extracted standard info from prmon json
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:14:04] 2025-10-12 23:13:32,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:14:04] 2025-10-12 23:13:32,541 | WARNING  | wrong length of table data, x=[1760310653.0], y=[1539.0] (must be same and length>=4)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | could have reported an average CPU frequency of 2566 MHz (4 samples)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | ..............................
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . Timing measurements:
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . get job = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . initial setup = 3 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . payload setup = 12 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . stage-in = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . payload execution = 41 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . stage-out = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | . log creation = 0 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | ..............................
[2025-10-12 16:14:04] 2025-10-12 23:13:32,542 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 16:14:04] 2025-10-12 23:13:32,543 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840749871/pilotlog.txt
[2025-10-12 16:14:04] [end log extracts]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,555 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,556 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 16:14:04] 2025-10-12 23:13:32,626 | INFO     | 
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | job summary report
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | --------------------------------------------------
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | PanDA job id: 6840749871
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | task id: 46676269
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 16:11:19,143 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | pilot state: failed 
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | transexitcode: 65
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | exeerrorcode: 65
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | exitcode: 65
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | cpuconsumptiontime: 20 s
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | nevents: 0
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | neventsw: 0
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | pid: 2451803
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | pgrp: 2451803
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | corecount: 12
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | event service: False
[2025-10-12 16:14:04] 2025-10-12 23:13:32,627 | INFO     | sizes: {0: 2348682, 1: 2348881, 12: 2348881, 15: 2349171, 23: 2349199, 57: 2372541, 58: 2372645, 59: 2376993, 183: 2377131}
[2025-10-12 16:14:04] 2025-10-12 23:13:32,628 | INFO     | --------------------------------------------------
[2025-10-12 16:14:04] 2025-10-12 23:13:32,628 | INFO     | 
[2025-10-12 16:14:04] 2025-10-12 23:13:32,628 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 16:14:04] 2025-10-12 23:13:32,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,653 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,656 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:14:04] 2025-10-12 23:13:32,656 | INFO     | job 6840749871 has completed (purged errors)
[2025-10-12 16:14:04] 2025-10-12 23:13:32,656 | INFO     | overall cleanup function is called
[2025-10-12 16:14:04] 2025-10-12 23:13:33,664 | INFO     | --- collectZombieJob: --- 10, [2451803]
[2025-10-12 16:14:04] 2025-10-12 23:13:33,664 | INFO     | zombie collector waiting for pid 2451803
[2025-10-12 16:14:04] 2025-10-12 23:13:33,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:14:04] 2025-10-12 23:13:33,664 | INFO     | collected zombie processes
[2025-10-12 16:14:04] 2025-10-12 23:13:33,664 | INFO     | will attempt to kill all subprocesses of pid=2451803
[2025-10-12 16:14:04] 2025-10-12 23:13:33,856 | INFO     | process IDs to be killed: [2451803] (in reverse order)
[2025-10-12 16:14:04] 2025-10-12 23:13:33,923 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:14:04] 2025-10-12 23:13:33,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:14:04] 2025-10-12 23:13:33,932 | INFO     | did not find any defunct processes belonging to 2451803
[2025-10-12 16:14:04] 2025-10-12 23:13:33,939 | INFO     | did not find any defunct processes belonging to 2451803
[2025-10-12 16:14:04] 2025-10-12 23:13:33,940 | INFO     | ready for new job
[2025-10-12 16:14:04] 2025-10-12 23:13:33,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:14:04] 2025-10-12 23:13:33,941 | INFO     | ***************************************
[2025-10-12 16:14:04] 2025-10-12 23:13:33,941 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:14:04] 2025-10-12 23:13:33,942 | INFO     | ***************************************
[2025-10-12 16:14:04] 2025-10-12 23:13:33,942 | INFO     | 
[2025-10-12 16:14:04] 2025-10-12 23:13:33,943 | INFO     | architecture information:
[2025-10-12 16:14:04] 2025-10-12 23:13:33,944 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:14:04] 2025-10-12 23:13:33,968 | INFO     | cat /etc/os-release:
[2025-10-12 16:14:04] NAME="CentOS Linux"
[2025-10-12 16:14:04] VERSION="7 (Core)"
[2025-10-12 16:14:04] ID="centos"
[2025-10-12 16:14:04] ID_LIKE="rhel fedora"
[2025-10-12 16:14:04] VERSION_ID="7"
[2025-10-12 16:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:14:04] ANSI_COLOR="0;31"
[2025-10-12 16:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:14:04] HOME_URL="https://www.centos.org/"
[2025-10-12 16:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:14:04] 
[2025-10-12 16:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:14:04] 
[2025-10-12 16:14:04] 2025-10-12 23:13:33,969 | INFO     | ***************************************
[2025-10-12 16:14:04] 2025-10-12 23:13:34,472 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 16:14:04] 2025-10-12 23:13:34,496 | INFO     | sufficient remaining disk space (1172664483840 B)
[2025-10-12 16:14:04] 2025-10-12 23:13:34,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:14:04] 2025-10-12 23:13:34,497 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:14:04] 2025-10-12 23:13:34,497 | INFO     | update_server=False
[2025-10-12 16:14:04] 2025-10-12 23:13:34,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:14:04] 2025-10-12 23:13:34,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:14:04] 2025-10-12 23:13:34,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:14:04] 2025-10-12 23:13:34,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:14:04] 2025-10-12 23:13:34,500 | INFO     | aborting loop
[2025-10-12 16:14:04] 2025-10-12 23:13:34,859 | INFO     | all payload control threads have been joined
[2025-10-12 16:14:04] 2025-10-12 23:13:34,871 | INFO     | all job control threads have been joined
[2025-10-12 16:14:04] 2025-10-12 23:13:35,501 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,505 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,505 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,573 | INFO     | all data control threads have been joined
[2025-10-12 16:14:04] 2025-10-12 23:13:35,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,669 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,794 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,865 | INFO     | [payload] control thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,877 | INFO     | [job] control thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:35,944 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,297 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,376 | INFO     | [job] validate thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,505 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,579 | INFO     | [data] control thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,650 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,929 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:36,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:14:04] 2025-10-12 23:13:40,953 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:14:04] 2025-10-12 23:13:56,896 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:14:04] 2025-10-12 23:13:56,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174386833216)>', '<ExcThread(monitor, started 140173538998016)>']
[2025-10-12 16:14:04] 2025-10-12 23:14:02,022 | INFO     | all workflow threads have been joined
[2025-10-12 16:14:04] 2025-10-12 23:14:02,023 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:14:04] 2025-10-12 23:14:02,024 | INFO     | traces error code: 0
[2025-10-12 16:14:04] 2025-10-12 23:14:02,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:14:04] 2025-10-12 23:14:04,406 | INFO     | PID=2444918 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:14:04] 2025-10-12 23:14:04,407 | INFO     | .. there are 26 such processes running
[2025-10-12 16:14:04] 2025-10-12 23:14:04,407 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:14:04] 2025-10-12 23:14:04,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:14:04] 2025-10-12 23:14:04,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:14:04] 2025-10-12 23:14:04,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:14:04] 2025-10-12 23:14:04,407 | INFO     | [monitor] control thread has ended
[2025-10-12 16:14:04] 2025-10-12 23:14:04,536 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:14:04] 2025-10-12 23:14:04,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:14:04] 2025-10-12 23:14:04,540 [wrapper] pilotpid: 2444918
[2025-10-12 16:14:04] 2025-10-12 23:14:04,546 [wrapper] Pilot exit status: 0
[2025-10-12 16:14:04] 2025-10-12 23:14:04,564 [wrapper] pandaids: 6840749871
[2025-10-12 16:14:04] 2025-10-12 23:14:04,626 [wrapper] cleanup supervisor_pilot 2444924 2444919
[2025-10-12 16:14:04] 2025-10-12 23:14:04,629 [wrapper] Test setup, not cleaning
[2025-10-12 16:14:04] 2025-10-12 23:14:04,635 [wrapper] apfmon messages muted
[2025-10-12 16:14:04] 2025-10-12 23:14:04,639 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:14:04] 2025-10-12 23:14:04,642 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:14:04]  *** Error codes and diagnostics ***
[2025-10-12 16:14:04]     "exeErrorCode": 65,
[2025-10-12 16:14:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 16:14:04]     "pilotErrorCode": 1305,
[2025-10-12 16:14:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 16:14:04]  *** Listing of results directory ***
[2025-10-12 16:14:04] total 221412
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:55 pilot3.tar.gz
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc      5112 Oct 12 13:57 queuedata.json
[2025-10-12 16:14:04] -rwx------. 1 boinc boinc     36292 Oct 12 13:58 runpilot2-wrapper.sh
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:14:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:09 run_atlas
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:09 job.xml
[2025-10-12 16:14:04] -rw-r--r--. 2 boinc boinc 222598861 Oct 12 16:09 EVNT.46676267._004762.pool.root.1
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc      6593 Oct 12 16:09 init_data.xml
[2025-10-12 16:14:04] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:09 start_atlas.sh
[2025-10-12 16:14:04] drwxrwx--x. 2 boinc boinc      4096 Oct 12 16:09 shared
[2025-10-12 16:14:04] -rw-r--r--. 2 boinc boinc    569677 Oct 12 16:09 input.tar.gz
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:09 boinc_lockfile
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc      2549 Oct 12 16:09 pandaJob.out
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc    975603 Oct 12 16:09 agis_schedconf.cvmfs.json
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc   1560580 Oct 12 16:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:14:04] drwx------. 5 boinc boinc      4096 Oct 12 16:09 pilot3
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc       523 Oct 12 16:11 boinc_task_state.xml
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc       985 Oct 12 16:11 memory_monitor_summary.json
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc     22015 Oct 12 16:11 log.46676269._089299.job.log.tgz.1
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc      8427 Oct 12 16:13 heartbeat.json
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc        22 Oct 12 16:14 wrapper_checkpoint.txt
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc       823 Oct 12 16:14 pilotlog.txt
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc        95 Oct 12 16:14 pilot_heartbeat.json
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc     88371 Oct 12 16:14 log.46676269._089299.job.log.1
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc       188 Oct 12 16:14 output.list
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc       620 Oct 12 16:14 runtime_log
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc    133120 Oct 12 16:14 result.tar.gz
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc      8192 Oct 12 16:14 boinc_mmap_file
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc      8528 Oct 12 16:14 runtime_log.err
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc       645 Oct 12 16:14 iItNDmlKIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEXlNDmH9wlXm.diag
[2025-10-12 16:14:04] -rw-r--r--. 1 boinc boinc     21803 Oct 12 16:14 stderr.txt
[2025-10-12 16:14:04] No HITS result produced
[2025-10-12 16:14:04]  *** Contents of shared directory: ***
[2025-10-12 16:14:04] total 218096
[2025-10-12 16:14:04] -rw-r--r--. 2 boinc boinc 222598861 Oct 12 16:09 ATLAS.root_0
[2025-10-12 16:14:04] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:09 start_atlas.sh
[2025-10-12 16:14:04] -rw-r--r--. 2 boinc boinc    569677 Oct 12 16:09 input.tar.gz
[2025-10-12 16:14:04] -rw-------. 1 boinc boinc    133120 Oct 12 16:14 result.tar.gz
16:14:06 (2441193): run_atlas exited; CPU time 25.655248
16:14:06 (2441193): called boinc_finish(0)

</stderr_txt>
]]>

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